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Computer Science Machine Learning

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Tuesday 15 September

Machine Learning · Cross-listed from hep-ex

Similarity Pairing with Energy Mover's Distance for Self-Supervised Pre-Training at the LHC

Many self-supervised methods for training foundation models at the Large Hadron Collider (LHC) rely on data augmentations to encourage the model to embed events into a representation space invariant to certain physical or detector symmetries. A common challenge arises from the large freedom in choosing a proper set of augmentations on which downstream performance depends. The implementation of augmentations involves either modifying existing events, potentially breaking the event fidelity, or simulating more event variants, which is computationally intensive. In this work, we present a data-driven method of pairing events by their similarity via the energy mover's distance (EMD), which measures how similar two events are in terms of the work required to transform one into the other. With this approach, distinct events are sampled and matched by their similarity to serve as views for learning invariance, keeping the physics content of each event intact without handcrafted distortions. We demonstrate this augmentation-free pairing method by pre-training on QCD jets via self-distillation and show that it can yield semantic jet embeddings with downstream discrimination power comparable to or better than an augmentation-based baseline.
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Machine Learning · Cross-listed from physics.comp-ph

Machine learning kinetics from molecular dynamics data

Most molecular transitions occur on timescales far beyond direct molecular dynamics simulations. The committor, the probability that a configuration reaches a product state before a reactant state, is a central kinetic statistic, providing a mechanism-independent reaction coordinate and a foundation for transition path theory and the calculation of rates. This review surveys modern approaches for estimating the committor and related kinetic statistics from molecular simulations, with an emphasis on self-supervised methods that learn solutions of their defining dynamical equations rather than relying on labeled shooting data. We develop a common operator viewpoint connecting generator-based partial differential equations, variational principles, Markov state models, dynamical Galerkin approximation, and neural networks. Empirical and theoretical evidence points to the efficiency of these methods. We provide theoretical and practical guidance for realizing their full potential in applications, including strategies for treating non-Markovian effects and for sampling. We conclude by identifying opportunities for further research, including connections to reinforcement learning and generative modeling.
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Machine Learning · Cross-listed from cs.AR

FAME: An FPGA-Based Platform for Approximate Multipliers Evaluation with Pattern-Guided DNN Retraining

Approximate multipliers can reduce hardware area and energy consumption in Deep Neural Network (DNN) inference; however, they introduce computational errors. Assessing the accuracy of numerous approximate multiplier designs across diverse DNN models and large-scale datasets remains challenging due to prohibitive evaluation times. This overhead primarily stems from the slow emulation of approximate multiplier behavior using look-up tables (LUTs) on CPU and GPU platforms. Moreover, the resulting accuracy degradation must be carefully quantified and, if necessary, mitigated (e.g., through retraining), further increasing the overall evaluation cost. To address these challenges, we propose FAME, an FPGA-based platform for evaluating approximate multipliers. The platform exploits the reconfigurable logic of Field-Programmable Gate Arrays (FPGAs) to implement approximate multipliers directly in hardware, eliminating the need for LUT-based emulation on CPU/GPU platforms and thereby enabling efficient DNN inference while significantly reducing evaluation time on large datasets. Furthermore, we introduce a pattern-guided DNN retraining technique to mitigate accuracy degradation induced by approximate multipliers. Specifically, retraining is guided by multiplier-specific patterns to effectively recover potential accuracy losses. We evaluate FAME using two DNN models, ResNet-18 and MobileNetV2, on the ImageNet dataset across 27 approximate multipliers. During inference, our approach achieves up to a 3.47x speedup in approximate multiplier evaluation compared to prior LUT-based emulation methods. Furthermore, the proposed retraining technique improves accuracy by up to 65.5% over existing retraining approaches for the evaluated multipliers. The code is publicly available at: https://github.com/gicLAB/FAME
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All authors Rappy Saha, Nima Amirafshar, Jude Haris, Nima Taherinejad, José Cano

Machine Learning · Cross-listed from hep-ex

Self-Supervised Learning for Robust Resonance Mass Regression in Cascade Decays

Reconstructing the mass of a heavy resonance from its decay products with missing energy is one of the central tasks that directly determine the sensitivity in new physics searches at collider experiments. Supervised learning approaches to this problem often struggle to generalize well due to the presence of various systematic uncertainties and distribution shifts. Exhausting all possible variations in the labeled data can be very compute-intensive, while a failure of the model to generalize can corrupt the reconstructed resonance widths that are critical in peak-hunting analyses. In this work, following the foundation model paradigm, we use a self-supervised approach to pre-train a transformer encoder with VICReg to learn an embedding invariant to various corruptions, then fine-tune it for mass regression on a heavy resonance with masses ranging from 2.5 to 6.5 TeV and a SUSY-like cascade decay into an eleven-body final state. We show that the pre-trained model reconstructs sharper resonance peaks and has a more stable performance under various realistic corruptions, compared to a supervised model of the same architecture trained on the same augmented data from scratch.
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All authors Ho Fung Tsoi, Alex Yang, Luis Felipe Gutierrez Zagazeta, Shion Chen, Dylan Rankin

Machine Learning · Cross-listed from q-bio.QM

Decoding Extrahepatic Targeting of Lipid Nanoparticles with Interpretable Machine Learning

Lipid nanoparticles (LNPs) have transformed RNA medicine, yet their clinical utility remains constrained by predominant hepatic accumulation after systemic administration. Redirecting LNPs to extrahepatic tissues requires understanding of how lipid chemistry and formulation composition jointly govern in vivo biodistribution. Here, we develop an interpretable machine learning framework to predict hepatic versus extrahepatic LNP accumulation and identify molecular design rules for extrahepatic RNA delivery. A literature-derived dataset of 476 intravenous LNP formulations was curated from 81 studies, integrating formulation composition, lipid chemical structures, and IVIS-based biodistribution profiles. Standardized SMILES representations of ionizable lipids, helper lipids, sterols, PEGylated or polymer-conjugated lipids, additional lipids, and polymer repeat units were converted into RDKit Expert descriptors and combined with formulation-level variables to generate an 808-dimensional feature representation. Logistic regression, random forest, and XGBoost achieved ROC-AUC values of 0.839, 0.866, and 0.874, respectively. SHAP-based interpretation and consensus feature ranking revealed that ionizable-lipid descriptors dominate biodistribution prediction, while formulation composition, particularly ionizable lipid, sterol, and PEGylated/polymer-conjugated lipid fractions, contributes substantially. The top 20 consensus features retained nearly all predictive information in tree-based models. The most informative features implicated electrotopological surface properties, charge- and hydrophobicity-weighted surface areas, molecular topology, and amide/alkyl structural motifs as drivers of extrahepatic accumulation. This study establishes an interpretable, data-driven strategy for decoding LNP biodistribution and provides actionable design principles for engineering LNPs beyond the liver.
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All authors Asal Mehradfar, Mohammad Shahab Sepehri, Owen Antholine, Varun Shankar, Glen S. Kwon, Salman Avestimehr, Morteza Rasoulianboroujeni

Machine Learning

Composite-Gradient Learning for Shared Control Authority Between Deep Reinforcement Learning and Model Predictive Control

Integrated deep reinforcement learning (DRL) and model predictive control (MPC) methods are increasingly used to control autonomous systems by combining their complementary capabilities. DRL learns control policies through interaction with the environment. MPC uses a system model to optimize control inputs while accounting for constraints. In DRL-MPC frameworks with shared control authority, both the DRL agent and the MPC controller each determine part of the control inputs. However, common learning formulations treat MPC as part of the environment and therefore do not explicitly account for MPC's contribution to control or its interaction with the DRL agent. This paper proposes a novel composite-gradient learning (CGL) method that integrates the MPC controller into the learning process by representing the DRL and MPC control inputs as a joint action and accounting for their interaction when updating the DRL agent during training. CGL is evaluated on two multi-class freeway traffic networks with different strengths of interaction between the DRL and MPC control inputs and it is compared with alternative methods that treat MPC as part of the environment or that only partially incorporate MPC into learning. The results show that CGL offers limited benefit under weak interaction, but learns higher-performing control policies than the alternative methods in a subset of training runs under strong interaction, although the average control-performance gains remain modest.
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Machine Learning

Accelerating Diffusion Sampling via Speculative Draft Trees

Speculative sampling accelerates diffusion model generation by drafting inexpensive candidate states and correcting them under a coupling that preserves the target distribution exactly, reducing the number of expensive target evaluations. Existing diffusion samplers, notably those based on reflection maximal coupling, are topologically constrained: their lookahead drafts form a chain graph, a single linear sequence, which inherently limits the acceptance rate per target evaluation. We connect speculative sampling in diffusion models to relative entropy coding (REC). This perspective shows the lookahead need not be linear and motivates our central contribution, draft trees, which enrich the candidates considered per round and lower the target function evaluations. We further adopt greedy rejection sampling, an REC algorithm, as the draft-target coupling, improving acceptance while guaranteeing exact target samples. Experiments across diverse target and draft models demonstrate up to 8.3% acceleration over the reflection coupling baseline in practical settings.
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All authors Marcello Bullo, Yanxiao Liu, Öykü S{\i}la Güner, Arpan Mukherjee, Deniz Gündüz

Machine Learning

The Missing "I Don't Know": Why Three Reasoning-Reliability Findings Converge on Calibrated Abstention

Three recent results describe what look like unrelated LLM reliability problems. Yin et al. (2026) show reasoning RL collapses tool-reliability representations. Suleymanov et al. (2026) show that under safety-constrained generation, large models rewrite flagged spans while small models truncate. Bastounis et al. (2024) prove any consistent-reasoning system without an implicit "I don't know" function must hallucinate infinitely often on broad problem classes. We argue these findings converge on a single intervention: calibrated abstention is what each independently identifies as the missing capability, even though the unavailability they document, a capability gap, a policy gap, and a recursion-theoretic gap, has a different source in each case. Honesty post-training has narrowed the gap in deployed models, but principled closure of the class Bastounis identifies requires a calibrated abstention function whose training signal at the leaderboard level is absent: dominant benchmarks assign zero reward to decline, so the leaderboard gradient that would select for the function does not exist. We propose four changes to evaluation: triple-scoring, abstention-rate reporting, capability-stratified evaluation, and mandatory calibration metrics. Benchmark reform is necessary, not sufficient, for closing the gap the theorem identifies.
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Machine Learning

DSD: Learning Diverse and Reusable Motor Skills via Diffusion Skill Discovery

Humans efficiently learn new tasks by reusing a rich repertoire of motor skills across different goals and contexts. A similar strategy can also be used to enable simulated characters to efficiently perform new tasks by leveraging reusable motor skills. To support a wide range of downstream tasks, the learned repertoire should be diverse, consisting of distinct behaviors as well as spatial and temporal variation within each behavior. A commonly used method for learning diverse skills is by maximizing the mutual information between skill latents and the states produced by a policy. The marginal state entropy promotes broad behavioral coverage, while the conditional entropy encourages consistent behaviors from each latent. However, directly estimating the marginal state entropy is intractable in high-dimensional control problems. Prior methods therefore rely on indirect latent-space approximations or coarse estimators of the state distribution. These approximations may not effectively promote broad coverage of the state space, resulting in skills with limited behavioral diversity and reduced utility for downstream tasks. In this work, we propose Diffusion Skill Discovery (DSD), a skill discovery method that uses a diffusion model to approximate the entropy gradient of the policy-induced state distribution through score matching. The resulting objective encourages the discovery of skills that produce a broader range of behaviors for high-dimensional humanoid control. The learned skills are reused in two downstream control settings: hierarchical control with a task-specific high-level policy and zero-shot control through latent selection from offline trajectories. Our experiments show that DSD discovers a broader repertoire of reusable motor skills than prior skill discovery methods, leading to the emergence of complex and agile behaviors that can be reused across downstream tasks.
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Machine Learning · Cross-listed from cs.DS

Efficient Robust Learning at the Information-Theoretic Limit

In an important recent work, Blanc (2026) gave an algorithm for robustly learning Boolean concept classes with respect to a fixed distribution that outputs a (randomized) classifier achieving the optimal error of $\eta + \varepsilon$ where $\eta$ is the noise rate. In contrast, it is well known that deterministic hypotheses cannot achieve error less than $2\eta + \varepsilon.$ Blanc's algorithm is computationally inefficient, and the main problem left open in his work is to find a polynomial-time algorithm given access to an oracle for empirical risk minimization (ERM). In this paper, we resolve this problem and give such an algorithm. Perhaps surprisingly, our techniques make crucial use of various types of no-regret learners. Additionally, we give an efficient algorithm (no ERM oracle required) for robustly learning any function class that admits sandwiching polynomials with respect to hypercontractive distributions. As one consequence, we give the first polynomial-time algorithm for robustly learning a halfspace with respect to Gaussian marginals that achieves error $\eta + \varepsilon$ for any constant $\varepsilon$.
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All authors Adam R. Klivans, Konstantinos Stavropoulos, Sergei Tikhonov, Arsen Vasilyan

Machine Learning

Regularized Least Squares Training of Quadratic Neural Networks with Applications to System Identification

This paper proposes a least squares approach for the training of quadratic neural networks with regularization. The proposed methodology yields a lower bound on the solution of the training optimization problem for the case where the regularization coefficient is positive. Moreover, it yields closed-form expressions for the approximate solution and its sensitivity The lower bound is tight and the approximate solution is the optimal solution when the regularization coefficient is zero. Having a closed-form expression for the weights reduces considerably the computational time when compared with iterative numerical methods such as backpropagation that can get stuck in local minima. The proposed approach has three main contributions, namely, (i) it yields an analytical expression for the weights, (ii) an analytical expression for the sensitivity of the weights to errors in the data is also provided, (iii) it establishes a connection between the optimization to compute a lower bound and nuclear norm minimization. The proposed least squares training is successfully applied to a nonlinear system identification example where the proposed lower bound is compared with the optimal value.
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Machine Learning

Reflect, Revise, Reuse: Training-Free Skill Evolution for GUI Agents

GUI agents execute long-horizon tasks on dynamic graphical user interfaces, where pop-ups, delayed loads, and relocated widgets routinely invalidate plans fixed before execution. Recent agent-skill frameworks encapsulate reusable procedural knowledge to mitigate this, yet existing skill designs are largely developed without targeting GUI execution dynamics and treat skills as static artifacts produced before deployment rather than living procedural knowledge that improves through it. We argue that what GUI agents need is not better static skills, but skills that can be revised from execution feedback at deployment time, without additional training. We propose EvoSkill-GUI, a training-free framework in which each skill is a structured multi-file package containing retrieval metadata, executable plans, backup localization, failure-recovery rules, accessibility utilities, and failure cases. EvoSkill-GUI operates through a \textbf{reflect-revise-reuse} loop: the executor performs instant in-rollout revisions, an isolated critic diagnoses failed trajectories under strict information isolation, and the executor edits specific skill files through a restricted tool interface. Across MobileWorld, AndroidWorld, and OSWorld, three mainstream GUI benchmarks spanning mobile and desktop platforms, EvoSkill-GUI consistently improves multiple base models without any training, with maximum gains of $+16.2\%$, $+6.0\%$, and $+10.5\%$ respectively, and evolved skill libraries continue to benefit related tasks rather than being rebuilt from scratch. Our code is available at https://github.com/ZJU-REAL/EvoSkill-GUI.
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All authors Bofan Chen, Boxuan Zhang, Fei Tang, Zhengxi Lu, Yong Du, Tongbo Chen, Weiming Lu, Jun Xiao, Yueting Zhuang, Yongliang Shen

Machine Learning

Fathom: Per-Query Read Depth for Sparse Decoding over Offloaded KV Caches

When agentic sessions run to a million tokens with many sessions resident at once, the KV cache and the index that ranks it live in host memory, and the scan that ranks all n keys for a top-k step becomes the traffic that bounds decoding. We present Fathom, a key scan in which each query decides how many bits of each key channel to read. The 4-bit K cache is stored channel-major as bit planes, so a prefix of t planes is exactly the channel's t-bit quantizer, and the query spends its bit budget by reverse water-filling over the variance-weighted importance of its channels. At one million tokens on Qwen3-8B a decode step is 1.67x faster in GPU time than with the 136-bit scans of Double Sparsity, Loki and SparQ r=32, and in the same GPU time as SparQ's 68-bit read (r=16) Fathom reads 18% fewer bytes with lower attention error on six of seven model and context settings. On RULER-style tasks every per-token scan matches exact top-k decoding, and on real coding-agent sessions Fathom reaches the step agreement of the most accurate 136-bit scan at 92 bits. The store is the 4-bit K copy a quantized serving stack already holds, and the method is not faster when the index is resident in GPU memory.
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Machine Learning · Cross-listed from cond-mat.mtrl-sci

Robust and Efficient AI Frameworks for Scalable Material Design and Property Prediction

This thesis develops robust and efficient AI frameworks for accelerating crystalline materials discovery by addressing both major stages of the materials-design pipeline: crystal property prediction and crystal structure generation. Motivated by the high computational cost of Density Functional Theory (DFT) and the limited availability of labeled materials data, the thesis explores graph representation learning, pretraining, multimodal learning, and generative modeling for scalable materials design. For property prediction, the thesis first introduces CrysXPP, which learns transferable crystal representations through unsupervised graph autoencoding, reducing dependence on large property-labeled datasets. It then proposes CrysGNN, a large-scale self-supervised graph pretraining framework that captures atomic connectivity, chemical attributes, and global structural information and transfers this knowledge to downstream property predictors through knowledge distillation. CrysMMNet further enriches crystal representations by jointly modeling graph structure and textual descriptions, thereby incorporating both local chemical and global structural knowledge. For crystal generation, the thesis introduces TGDMat, a text-guided joint diffusion framework that jointly models lattice parameters, atomic types, and atomic coordinates while incorporating textual structural knowledge during denoising. This enables the generation of more valid and stable periodic materials while also supporting conditional generation from natural-language descriptions. Overall, the thesis establishes a unified AI-based framework for data-efficient property prediction and controllable crystal generation, demonstrating how graph learning, multimodal representations, and generative models can reduce computational cost and improve the scalability of materials
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Machine Learning · Cross-listed from astro-ph.IM

Rethinking Domain Specialization for Open-Ended Scientific Reasoning in Astronomy Language Models

Domain-specialized language models are widely used for scientific question answering, but stronger general-purpose systems raise a sharper question: when does domain-specific fine-tuning remain valuable for open-ended scientific reasoning? We study this in astronomy with a curated QA benchmark from publicly available 2017–2026 Olympiad-style materials. The free-response subset contains 300 questions, including 204 text-only and 96 image-linked examples. We compare open-weight and API-served general-purpose, multimodal, and astronomy-specialized models using judge-based correctness and complementary reference metrics. Strong general-purpose models establish the highest correctness baseline in this testbed, while analyses of metric agreement, judge sensitivity, benchmark composition, and modality reveal variation not captured by a single leaderboard. These results motivate treating domain specialization as a task- and deployment-dependent property and highlight the role of domain-specific evaluation in determining which models, capabilities, and evaluation criteria are appropriate for scientific workflows.
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All authors Vanessa Lama, Sanjay Das, Emily Herron, Yuan-Sen Ting, Tijmen de Haan, Junqi Yin, Tirthankar Ghosal, Feiyi Wang

Machine Learning

Lecture notes on Physics Informed Neural Networks, Neural Operators, and their applications

This is the set of lecture notes for the PhD course \href{https://www.unibz.it/en/faculties/engineering/phd-computer-science/study-course-offering/2025/36967}{Physics Informed Neural Network, held at the University of Bozen/Bolzano} in the academic year 2025/2026. The goal of the course was to introduce the concept of Physics Informed Deep Neural Networks (PINN) and Neural Operators (NOs), discuss their implementation from scratch in PyTorch and using advanced ad-hoc developed open-source libraries such as NVIDia PhysicsNeMo to address real-world problems in various fields (engineering, physics, petroleum reservoir). We discuss recent topics such as Mixture-of-Models, Fourier Neural Operators, Physics-Informed Kolmogorov-Arnold Networks (PIKANs) and Fourier Neural Operators.
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Machine Learning · Cross-listed from cs.AI

What You Can't See Is Still What You Learn: A Preregistered Sixty-Society Confirmation That Evidence Masking Drives Compositional Generalization

Restricting what a module can read may improve what a system learns to compute. We test this in a preregistered confirmation with sixty four-cell systems sharing a frozen language-model backbone and communicating through learned continuous packets. Five conditions vary evidence masking, ownership markers, and replacement of foreign evidence with neutral filler (task-irrelevant text of the same token length), across six initialization clusters, each with two data orders, on one fresh task world. With markers available in both regimes, masking improved accuracy on held-out two- and three-operation compositions by median paired differences of 0.846 and 0.859; all twelve pairs cleared the required margins, and the full preregistered behavioral criterion passed. The unmarked replication also passed. No marked global-visibility (G+) system passed the marker-following check, so the effect of usable role information remains unresolved. The filler condition yielded seven full generalizers, but its decomposition criteria were inconclusive. Packet interventions in all eighteen audited masked systems followed the predicted intermediate-value changes on eligible cases; these finite, success-conditioned audits do not establish mediation. The results confirm a large advantage of the tested masking regime, while leaving its finer attribution and generality open. Protocols, results, and checkpoints are public.
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Machine Learning

ENCP: Episode-Normalized Conformal Prediction for Vision-and-Language Navigation

Uncertainty estimation for Vision-Language-Navigation (VLN) models is a critical task since it can help identify ambiguous and unreliable predictions, enabling agents to make safer navigation decisions. As one of the most advanced uncertainty estimation frameworks, conformal prediction (CP) offers a promising approach for uncertainty estimation in VLN. However, given that VLN agent requires a sequence of steps, standard calibration in conformal prediction fails to provide coverage guarantee it promises over a dependent, variable-length VLN episode. To this end, we propose Episode-Normalized Conformal Prediction (ENCP), which rescales a nonconformity score by the policy's residual confidence and calibrates one maximum score per episode. Under exchangeable calibration and test episodes, this construction covers the ground truth at every step with probability at least $1 - \alpha$, while allowing dependence among steps within an episode. Across four VLN policies and three nonconformity scores on R2R and REVERIE dataset, ENCP meets all reported empirical step-coverage targets on the seen-to-unseen evaluation. These results demonstrate that ENCP can provide model-agnostic uncertainty estimates, which might be useful for determining when a VLN agent should defer to a more capable predictor, including human assistance.
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Machine Learning

FreqSpaNet: Frequency and Spatial Learning of SFPF for Physical Layer Hardware Integrity Detection

Unauthorized hardware replacement can preserve a wireless device's logical identity while altering its physical implementation, posing a challenge to hardware integrity verification. Spatio-frequency polarization fingerprints (SFPFs) capture device-dependent responses across multiple frequencies and directions, but their frequency and spatial dimensions exhibit different structural dependencies. We propose FreqSpaNet, an SFPF representation learning network for open set hardware anomaly detection. A frequency branch captures local variations among neighboring frequencies, while a geometry-aware spatial branch models directional relationships using angular information. The two representations are combined through adaptive fusion, and complementary pretraining further captures shared information while preserving the distinct characteristics of the frequency and spatial representations. Experiments show that FreqSpaNet achieves a mean AUROC of 96.31%, 9.05 points above the baseline. Results under seven hardware replacement scenarios further verify the effectiveness of FreqSpaNet.
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All authors Xiaoxuan Huang, Jinlong Xu, YiZhe Wang, Meng Zhang, Xian Li, Yuying Bian

Machine Learning · Cross-listed from math.OC

Bridging the Gap Between Homogeneous and Heterogeneous Asynchronous Optimization Is Surprisingly Difficult

Modern large-scale machine learning tasks often require multiple workers, devices, CPUs, or GPUs to compute stochastic gradients in parallel and asynchronously to train model weights. Theoretical results typically distinguish between two settings: (i) the homogeneous setting, where all workers have access to the same data distribution, and (ii) the heterogeneous setting, where each worker operates on different data distributions. Known optimal time complexities in these settings reveal a significant gap, with far more pessimistic guarantees in the heterogeneous case. In this work, we investigate whether these pessimistic optimal time complexities can be overcome under different assumptions. Surprisingly, we show that improvement is provably impossible under widely used first- and second-order similarity assumptions for any randomized algorithm. We then turn to the interpolation regime and demonstrate that the weak interpolation assumption alone is also insufficient. Finally, we introduce a minimal combination of irreducible assumptions, strong interpolation and the local Polyak-Lojasiewicz condition, to derive a new time complexity bound that matches the dependence on worker computation times in the best-known result in the homogeneous setting, without requiring identical data distributions.
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Machine Learning · Cross-listed from cond-mat.dis-nn

Bias-Induced Crossover in Absolute Capacity of Dense Associative Memory

The absolute capacity of dense associative memory has mainly been analyzed for unbiased patterns. Here we examine the effect of bias in centered binary patterns under the Krotov-Hopfield single-site criterion $P_{\mathrm{error}}=1/N$, where $P_{\mathrm{error}}$ is the probability that a single-site flip lowers the energy of a stored pattern and $N$ is the number of neurons. Each pattern component takes $1-q$ with probability $q$ and $-q$ otherwise, where $0<q\le1/2$. For polynomial interactions of order $n$, a signal-to-noise analysis gives an absolute capacity of order $N^{n-1}/\ln N$ at $q=1/2$. For fixed $q<1/2$, however, the capacity is $O(N^{n/2})$ for even $n\ge4$ and $O(N^{(n+1)/2})$ for odd $n\ge5$. For $n=3$, both the unbiased and fixed-bias capacities remain $O(N^2/\ln N)$. For $n\ge4$, these different asymptotic forms imply a nonuniform large-$N$ limit near $q=1/2$. Asymptotic matching predicts a bias-induced crossover in the region $1-2q=O(\ln N/N^{\lfloor n/2\rfloor-1})$. The crossover originates from a bias-dependent crosstalk mean that reduces the stability of sites carrying the more frequent value $-q$. Computer simulations are compared with the finite-size conditioned-Gaussian predictions. An activity-dependent control potential that cancels the conditional crosstalk mean restores the $N^{n-1}/\ln N$ capacity for fixed $0<q<1/2$ within the conditioned-Gaussian approximation.
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All authors Yuto Sakurai, Takeaki Shimokawa, Kazunori Iwata, Kazushi Mimura

Machine Learning

Coupled Calibration and Learning: Mitigating Teacher Bias in LLM Distillation without Target-Domain Reward Feedback

Large language model (LLM) distillation aims to transfer the capabilities of a powerful teacher to a smaller student. Direct imitation, however, can also transfer the teacher's systematic bias and errors. This challenge is particularly pronounced under covariate shift, when the teacher's reliability on target questions is uncertain and target-domain reward feedback is unavailable. We propose Coupled Calibration and Learning (CCL), an LLM distillation algorithm that couples teacher calibration with student updates through token-level branching, using reward feedback only on source questions. Each iteration calibrates the teacher using source feedback and then uses the calibrated teacher to train the student on target questions. The updated student, in turn, informs subsequent calibration. In an autoregressive policy framework, we prove that the output student's expected average Kullback-Leibler divergence to the oracle student converges to zero at a polynomial rate in the number of iterations. The oracle maximizes the true reference-regularized target reward within the student class, which need not represent the unrestricted optimal policy. Our analysis quantifies the progress of projected student gradient updates while controlling the error in teacher calibration. We further establish a separation from regularized direct matching: its error relative to the oracle student can remain bounded away from zero even when the teacher achieves higher regularized target reward than every student policy. These results demonstrate that LLM distillation can overcome persistent teacher bias and recover the optimal student through coupled calibration and learning, without target-domain reward feedback.
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Machine Learning · Cross-listed from cs.CV

Tables Decoded: DELTA for Structure, TARQA for Understanding

Table understanding is a core task in document intelligence, encompassing two key subtasks: table reconstruction and table visual question answering (TabVQA). While recent approaches predominantly rely on vision- language models (VLMs) operating on table images, we propose a more scalable and effective alternative based on structured textual representations. These representations are easier to process, align more naturally with LLMs, and eliminate the need for language-specific visual encoders, making them particularly suitable for multilingual documents. We present DELTA, which separates physical structure recognition, logical structure recognition, and OCR to extract both layout and content accurately. DELTA outputs tables in Optimised Table Structure Language (OTSL), a compact and unified format that encodes cell arrangements and textual content. On table structure recognition (TSR), DELTA achieves TEDS- Structure scores comparable with state-of-the-art methods across FinTabNet, PubTabNet, and PubTables-1M. We further establish its robustness on non-English tables through our curated Hindi benchmark, TORQUE. Building on this, we introduce TARQA, an LLM fine-tuned on OTSL sequences. Our approach yields gains of 9.3 p.p. on WTQ (TabQA) and 9.2 p.p. on FinTabNetQA (TabVQA), respectively. On TORQUE, our method ranks second among all VLMs and DELTA + LLM variants. We release our code, models, and benchmark at: https://github.com/Tihiitborg/Tables-Decoded
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All authors Jahanvi Rajput, Dhruv Kudale, Saikiran Kasturi, Utkarsh Verma, Ganesh Ramakrishnan

Machine Learning

Reduced-Space Multi-Fidelity Bayesian Optimization of Process Simulation Models

Optimizing industrial process flowsheets is often computationally prohibitive due to the high cost of rigorous simulations and the curse of dimensionality inherent in complex design spaces. To address these challenges, we present a reduced-space multi-fidelity Bayesian optimization (RS-MFBO) framework designed for high-dimensional, expensive black-box functions. The approach integrates Global Sensitivity Analysis (GSA) for dimensionality reduction with a fidelity-augmented Gaussian process that captures correlations between low-cost approximations and expensive high-fidelity evaluations. A cost-aware acquisition strategy, augmented with cooldown and promotion mechanisms, adaptively guides the allocation of samples across fidelities. The framework is validated on two distinct industrial process simulators: a plasmid DNA bioprocess in SuperPro Designer and a green fuel synthesis plant in Aspen HYSYS. Results across diverse economic and physical objectives demonstrate that the proposed method substantially reduces the number of high-fidelity simulator evaluations while maintaining competitive optimization performance compared to single-fidelity baselines. These results highlight RS-MFBO as a scalable, simulator-agnostic approach for cost-constrained black-box optimization.
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Machine Learning

Learning-Guided Planning in Large Dynamic Action Spaces: Budgeted Tree Search for One-to-Many Mobile Charging

Many learned sequential decision systems map the current state directly to an action. That shortcut becomes brittle when candidate actions are numerous, geometrically structured, and rebuilt with the state. One-to-many mobile charging makes this setting concrete: with N=250 sensors, the initial state induces about 1,125 candidate charging-stop actions; each chosen stop simultaneously serves its in-range sensors, and the action universe changes as sensors die. LP-BTS is a learning-guided planning architecture: a graph proposal policy concentrates a small candidate support, a learned value critic evaluates leaves, and edge-budgeted PUCT compares short simulated futures before committing an action. Because the policy scores this set without a fixed output head, a single frozen checkpoint covers every evaluated setting, spanning action universes from 736 to 2,813 stops. Matched ablations reveal complementary effects: uniform sampling costs 8.8 survival percentage points, while, with targeted support fixed, PUCT jointly retains 1.4 points (about 3.5 of 250 sensors) and direct policy selection travels 23% farther. On a prospectively specified, sealed 30-scenario confirmatory bank evaluated once, LP-BTS attains the highest observed survival (0.4545) and alive-AUC (0.8031). Its estimated survival advantage over the strongest domain-engineered comparator is +0.0066 (95% CI [-0.0037, +0.0184]), an unresolved difference, while it exceeds a deadline heuristic and two source-derived direct-policy reconstructions on every paired scenario. Both learned rows are trained, source-derived reconstructions of variants reported by Gong et al. In this setting, the results provide controlled evidence about learning-guided planning in a large, dynamic action space.
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Machine Learning

Bridging the Confidence Gap: Temperature Scaling for Calibrating Test-Time Prompt Tuning

Test-time prompt tuning (TPT) enables adaptation on a single test instance, achieving improved accuracy but often sacrificing calibration performance. Most existing calibration methods introduce additional regularization terms to promote dispersion across text embeddings and reduce calibration error, yet these methods often suffer from a drop in accuracy. Motivated by the well-calibrated nature of zero-shot predictions, we propose CoTS, a simple yet effective post-hoc calibration method that preserves accuracy. Specifically, CoTS applies temperature scaling to minimize the confidence gap between adapted and zero-shot predictions. To fully exploit the potential of multiple augmentations during adaptation, we introduce a weak-strong ensemble strategy that further boosts accuracy. We then apply CoTS to this ensemble, termed E-CoTS, to maintain its well-calibrated property. Extensive experiments on diverse datasets and backbones show that our approaches effectively mitigate miscalibration without compromising primary accuracy. For instance, E-CoTS reduces the average expected calibration error of TPT from 11.90% to 5.38% on ImageNet variants, while even increasing accuracy from 60.74% to 62.95%. Moreover, when integrated with existing calibration methods, E-CoTS usually enhances both accuracy and calibration simultaneously.
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All authors Yuwei Liang, Jian Liang, Dapeng Hu, Yinuo Xu, Ran He

Machine Learning

OPEN-1B: A Fully Auditable Training Run

Open-source language models have a reproducibility problem. Despite releasing weights, training data, and recipes, none of them are provably reproducible due to the non-associativity of floating-point arithmetic. Deep learning frameworks often offer a deterministic execution mode, allowing reproducible operations on the same machines. Unfortunately, this determinism does not carry across hardware such that a user can verify that a released checkpoint was actually produced using the declared training recipe. This leaves room for undisclosed data, injected biases, or backdoors that existing techniques such as proof-of-learning or proof-of-training-data cannot rule out. We introduce a new tier of model transparency, fully auditable, in which every operation on every data sample during training is independently reproducible on heterogeneous commodity hardware with bitwise certainty. By imposing a definite order on the sources of training nondeterminism, GPU kernel reductions, data batch ordering across a data-parallel cluster, and inter/intra-node collective communication, we make it possible to replay any individual step of a large, distributed training run on a single piece of commodity hardware and check it against the published trajectory. Because replaying an entire run on one machine is infeasible, we support this with a collective verification scheme in which many independent auditors each certify individual steps, together covering the whole run. We release Open-1B, a model trained under this regime, together with its full pretraining dataset, every intermediate checkpoint, the training codebase, and the audit harness needed to reproduce and verify any step of its training.
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All authors John Donaghy, Brian Wilcox, Oğuzhan Ersoy, Shikhar Rastogi, Adam St Arnaud, Alexey Titov, Jordan Greenberg, Ben Fielding, Harry Grieve

Machine Learning

Large Language Models Develop Belief State Geometry In-Context

Large language models (LLMs) trained on next-token prediction exhibit remarkable in-context learning (ICL) abilities, yet the representations that support ICL remain poorly understood. We consider such representations in a controlled setting: prompting LLMs with data emitted from hidden Markov models (HMMs) and probing for the corresponding belief state – the posterior distribution over the HMM's hidden states given the observed token history. Across six open-source LLMs prompted with data from 40 HMMs selected for non-trivial belief structure, we find that belief states are linearly decodable from residual stream activations, with peak probe $R^2$-values from 0.83-0.99 across HMM and LLM combinations, ranging from early to late layers. To establish functional relevance, we intervene directly on the probe-identified subspace via patching and steering, resulting in downstream prediction quality on the order of the untampered model, while controls degrade performance substantially. Together, these results provide representation-level evidence that ICL in open-source LLMs approximates optimal Bayesian prediction over a context-inferred generative model. More broadly, our findings extend prior results linking input-distribution structure to activation geometry: from toy networks trained explicitly on HMM data to production-scale LLMs.
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All authors Daniel Balcells, Andrew Jun Lee, Chirag Rastogi, Paul M. Riechers, Adam Shai, Xavier Poncini

Machine Learning

Hybrid Variational Quantum Circuits for Multivariate Regression and High-Dimensional Data Reconstruction

Variational quantum circuits (VQCs) are parameterized quantum circuits optimized classically. We propose a hybrid variational quantum circuit (HVQC) extending VQCs with a classical affine post-measurement layer, enabling vector-valued regression without the linear overhead of independent scalar circuits. Theoretically, we show that elementary one-and two-qubit circuits can approximate quadratic functions and products via data re-uploading and entanglement, providing the foundations of the full architecture. Experimentally, on two synthetic image reconstruction datasets and the Friedman1 benchmark (40,568 test samples), our HVQC matches Gaussian Process Regression and outperforms XGBoost and Random Forest. An ablation study confirms that both quantum and classical components are essential, and results highlight the central role of the feature map in hybrid quantum-classical models.
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All authors Koffi Ognandon Ayena, Frédéric Holweck, Serge Iovleff, Amah S d'Almeida

Machine Learning · Cross-listed from cs.SE

Type-IV Code Clone Detection via Layer-Wise Non-Contrastive Representation Learning

Software clones are fragments of code that are similar or functionally equivalent to each other. They pose significant challenges for maintenance, refactoring, and bug detection. Detecting Type-IV clones, which are semantically equivalent but may differ syntactically, is particularly difficult for traditional token- or syntax-based methods. Recent machine learning approaches rely on contrastive learning, which requires careful negative sampling and can introduce bias. In this paper, we propose LWVIC4Code, a non-contrastive representation learning approach specifically designed for Type-IV clone detection. Building on the Variance-Invariance-Covariance Regularization (VICReg) framework and prior layer-wise VICReg training, LWVIC4Code introduces cross-layer consistency regularization and depth-dependent layer weighting to progressively refine semantic information across transformer layers, producing robust and discriminative code representations. We conduct an empirical study comparing LWVIC4Code against a contrastive learning baseline and zero-shot large language models on Python (Kamino) and multi-language (GPTCloneBench) datasets. Results show that LWVIC4Code achieves competitive or superior performance without negative samples, benefits from layer-wise supervision, and generalizes effectively from Python to other languages, particularly Java and C#. These results demonstrate that non-contrastive, layer-wise representation learning is a promising direction for robust semantic code clone detection.
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All authors Luciano Marchezan, Kevin Delcourt, Eugene Syriani, Houari Sahraoui