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Computer Science Symbolic Computation

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Wednesday 14 October · still arriving

Symbolic Computation · Cross-listed from cs.CL

MakSafe: A Spatiotemporal Semantic Framework for Formal Specification and Compliance Checking of Road Vehicle Safety Rules

Scenario-based validation is essential for automated road vehicles but cannot cover the full variability of openworld traffic. We present MakSafe, a formal spatiotemporal framework for specifying and checking road vehicle safety rules through semantic zones, action-based forecasting, and trace-tree reasoning, avoiding uniform time discretization. We formalize the road network, vehicle states, and occupancy zones, then build executable rules for front-vehicle identification and timeto-collision (TTC) verification. The evaluation combines a tracedependent case study with a scalability benchmark over traffic density (N ), horizon (H), and branch factor (B). MakSafe yields branch-specific verdicts, deriving safe and unsafe outcomes from the same initial scene, and re-evaluates a scenario after a control update. A single rule check stays well below a millisecond across the reported sweep, and longer horizons slow the TTC check.
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All authors Maksym Labzhaniia, Julien Deantoni, Marie-Agnès Peraldi-Frati, Frédéric Mallet

Symbolic Computation · Cross-listed from cs.LG

Sparse Autoencoders Are a Shared Coordinate System for Symbolic Matching

Large language models (LLMs) hold broad knowledge in one set of weights, but lack interpretability and trustworthy reasoning, especially in high-stakes use cases. A neuro-symbolic model, with its interpretable architecture and System 2 reasoning capacity, is a promising alternative if built at the scale of LLMs; however, its symbolic backbone is usually constructed with human effort, so existing neuro-symbolic models are bottlenecked by the scope of the symbol component and usually domain-specific. A data-driven method could instead build a larger symbolic system by aligning and merging existing ones. We target its first, foundational step: matching units across these heterogeneous systems. Our method, SAE-IDF, encodes a symbol in its native context into a sparse code with a sparse autoencoder (SAE), re-weights each dimension by its rarity and matches across systems. On 12 tasks across 6 kinds of symbolic system, SAE-IDF outperforms the same LLM's dense baseline on all tasks with Gemma-2-9B and all but one with Llama-3.1-8B, by up to 45 points, consistently across SAE layers and configurations. SAE-IDF is also interpretable: every dimension of the sparse code has a human-readable meaning, so each match decomposes into named concepts (features). Our work paves the way to a universal symbolic backbone.
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All authors Xiaocong Yang, Xuanyu Meng, Yuji Zhang, Jiawei Han, ChengXiang Zhai

Symbolic Computation

Seven Limit Cycles in a Periodically Forced Three-Zone Equation

We construct a seven-cycle example for a periodically forced scalar equation with a continuous three-zone piecewise-linear nonlinearity. Symbolic integration and linear elimination reduce the four-flight matching conditions to two equations in the residence times. The competing exterior visits produce an additional turn of the critical response and lead to the rational parameters $(A,B,\mu)=(9,3/2,181363/100000)$. At these parameters, finite Taylor estimates give three sign changes of the return displacement. Scalar order, analyticity along transverse itineraries, and half-period reflection then establish at least seven distinct isolated periodic orbits on the phase cylinder.
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Tuesday 13 October · still arriving

Symbolic Computation · Cross-listed from cs.AI

Compiling Expert Procedures into Verified Programs: When a Small Model Is Enough

In procedural tool-use domains, how much of the gap between base models is procedure rather than capability? We build an explicit program from a teacher's traces and run it in front of unchanged small models, including an 8B model. The construction, PLVR , takes the reasoning traces of a teacher, Kimi-K3, clusters their segments to locate recurring operations, has a frontier model author one typed primitive per operation, each run by a small frozen model and assembles the program by A* search over a mined rule library, under a reference-action objective. At inference the program takes one of two forms: for troubleshooting and tool search it produces the chain of thought the student would otherwise generate for itself, and the student acts on it; for multi-turn tool matching the student proposes each action and the program checks, repairs, or retries it before it goes out. On the official tau2-Bench Retail and Telecom test sets and on LiveMCPBench, with three Nemotron base models and the same program for each, the answer depends on the domain. On Telecom, Granite-4.2-8B as the student goes from 43.0% to 91.2% under the program, and every Nemotron student reaches 93.3-94.4%, against at most 58.2% for fine-tuning on the same traces, prompt optimisation of the student, or two token-matched baselines. With Granite-4.2-8B as the student, the program is within 2 to 3 points of the Nemotron students on Telecom and within 3 on Retail, and 3 to 13 points below them on LiveMCPBench: where the domain is procedural an 8B student is enough, and on tool search the student still matters. On Retail and LiveMCPBench the program is competitive with the best baseline. The spread between base models shrinks from about 7 points to about 2, averaged over the suites, with no weights changed.
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Symbolic Computation · Cross-listed from cs.RO

HelpMeOut: A Neuropsychology-Grounded Benchmark for Error-Aware Monitoring of Household Task Execution

We introduce HelpMeOut, an embodied AI benchmark for error-aware monitoring of household task execution. Existing embodied household benchmarks typically assume that humans execute tasks correctly, but this assumption does not hold for cognitively impaired persons or older adults whose everyday activities produce structured execution errors. To address this gap, HelpMeOut operationalizes research on everyday action errors into 20000 paired activity episodes, covering nine neuropsychologically motivated error categories. In each episode, agents observe a streaming human activity trajectory and must monitor whether the execution is unfolding correctly, diagnosing any structured errors as early as possible. We evaluate learned-monitor, symbolic, change-point, and frontier LLM prompting baselines. Results show that these methods perform poorly as error monitors, often missing when execution goes wrong. These results suggest a gap left by standard goal-inference and task-completion benchmarks, making HelpMeOut a testbed for error-aware assistive agents.
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All authors Haoran Wang, Jingwei Huang, Anqing Duan, Ho Seok Ahn, Bruce Macdonald

Monday 12 October

Symbolic Computation · Cross-listed from cs.RO

Generative Flow on Symbolic Abstractions for Embodiment Capability Discovery

Achieving complex, long-horizon robot behavior remains challenging because successful execution depends on skills grounded in a robot's physical affordances. Existing training-task distributions are often handcrafted or sampled from large language models (LLMs), relying on semantic plausibility rather than embodiment-specific feasibility. This mismatch can produce curricula that are too difficult, redundant, or blind to non-obvious but learnable behaviors. We propose Generative Flow on Symbolic Abstractions (FOSA), a framework for discovering embodiment-specific capabilities by learning a grounded task generator. FOSA parameterizes an abstract policy as a Generative Flow Network that constructs symbolic task skeletons. Each skeleton is compiled into a simulation environment, where low-level policy-learning performance provides the reward signal for the abstract policy. Across heterogeneous robot platforms, FOSA discovers diverse and executable tasks near the robot's empirical capability frontier. After distilling the discovered task policies into a single language-conditioned policy, FOSA improves performance on unseen complex and long-horizon tasks. The code and demonstration videos are available at https://www.youwei-yu.com/fosa.
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Saturday 10 October

Symbolic Computation · Cross-listed from cs.CL

Have You Been Convinced? A Neuro-symbolic Argumentation Reasoning Approach to Detecting Persuasiveness in ChangeMyView Discussions

Argument structures represent how individual arguments interact within a discourse. However, leveraging these structures to infer meaningful knowledge remains challenging, as it requires a formal representation of how argumentative influence propagates across the structure. We propose Neuro-symbolic Argumentation Reasoning System (NARS) for performing persuasiveness detection directly from online discussions. The neural component employs retrieval-augmented iterative LLM reasoning to extract bipolar argument structures, while the symbolic component applies gradual argumentation semantics to propagate argumentative influence over the structure. Using the Webis-CMV-20 corpus, we construct CMV2BAS, a dataset of long, multi-threaded ChangeMyView discussions annotated with LLM-derived bipolar argument structures and labeled with delta events (view change vs.\ no change). We investigate whether gradual argumentation semantics can effectively detect persuasiveness, whether augmenting them with argument quality and graph-based centrality improves performance, and whether symbolic reasoning remains necessary in the presence of modern LLMs. NARS achieves F1=0.57 and AUC=0.56 under its best configuration, outperforming zero-shot Qwen3.6:27B and GPT-oss:20B. We identify support-dominant discussions and long argumentative chains as key failure modes limiting attack influence propagation. Our work demonstrates the feasibility of operationalizing formal gradual argumentation semantics over noisy real-world discourse for scalable macro-level persuasion analysis, while highlighting key challenges and directions for future research in neuro-symbolic argumentation reasoning. We release both CMV2BAS dataset and the NARS framework for public use.
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Friday 9 October

Symbolic Computation · Cross-listed from cs.AI

SAT-RL: Training Language Models for Logical Reasoning with Symbolic Solvers

Large language models (LLMs) have achieved strong performance in mathematical and logical reasoning, yet they still suffer from the curse of complexity and struggle as problem difficulty increases with the number of constraint interactions and the size of the search space. In contrast, satisfiability solvers such as Z3 provide scalable and verifiable reasoning through constraint solving under formal theories, but lack the flexibility to interpret natural-language problem descriptions. In this work, we propose SAT-RL, a reinforcement-learning (RL) framework that trains LLMs to interact with symbolic solvers through multi-turn tool execution. SAT-RL leverages synthetic data generation with verifiable solutions, supervised warm-up on solver-augmented traces, and solver-grounded reinforcement learning with tool-aware rewards. Experiments show that SAT-RL substantially improves symbolic reasoning with tools on both in-domain and out-of-domain logic tasks. Our code is available on https://github.com/sunjia72/SAT-RL.
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Symbolic Computation · Cross-listed from math.NT

An Infinite Family of Apéry-like Recurrences for Euler's Constant

Euler's constant $\gamma$, also known as the Euler-Mascheroni constant, remains one of the most elusive constants in mathematics. Despite extensive study, its irrationality is still unproven, and Apéry-like approximations of it are remarkably scarce. We present a novel identity that expresses $\gamma$ in terms of a Meijer G-function and its first few derivatives. This identity is then generalized and used to systematically generate infinitely many Apéry-like approximations of $\gamma$ using a Conservative Matrix Field construction based on the Meijer G-function.
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All authors Rotem Kalisch, Tali Monderer, Elyasheev Leibtag, Shachar Weinbaum, Michael Shalyt, Ido Kaminer

Symbolic Computation

Exact rational certificates and a Lean formalization of the eleven-variable Vasc inequality

We prove that the cyclic sum $\sum_{i=0}^{10}(x_i-x_{i+1})/(x_{i+1}+x_{i+2})$ is nonnegative for every strictly positive real eleven-tuple, with indices taken modulo eleven. Clearing denominators reduces the problem to a homogeneous polynomial. Subtracting the smallest coordinate then separates the proof into nonnegativity of a common-translation derivative and nonnegativity on a full boundary face. We supply exact rational polynomial certificates in Gram-matrix form for both statements. The derivative certificate uses a linear multiplier, centered monomials and cyclic averaging; the boundary certificate uses a strictly positive quadratic multiplier and uncentered monomials. Their verification requires 6,069 cyclic coefficient comparisons and 34,304 literal coefficient comparisons. All 606 certificate matrices are certified by integer congruences with strictly diagonally dominant images. A Lean 4 development formally verifies the certificate checks and their connection to the original inequality. The exact certificate data, replay programs, and formal sources are publicly available.
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All authors Dakai Guo, Ruichen Qiu, Yichuan Cao, Ruyong Feng, Xiao-Shan Gao

Thursday 8 October

Symbolic Computation

RISR: Residual-Informed Scientific Equation Discovery with Large Language Models

Symbolic regression combines structural search with numerical fitting, but aggregate fit scores do not describe how the remaining error varies across inputs. We introduce RISR, a residual-informed method that uses these error patterns to guide formula discovery and learn which corrections are worth fitting. A residual encoder compresses aligned inputs, targets, current predictions, and residuals into continuous tokens that condition a language model to propose formulas. For subsequent refinement, a dual-view relational encoder uses additive and regularized multiplicative residuals to predict the post-fit utility of candidate corrections. We evaluate RISR on scientific tasks from the LLM-SRBench. RISR achieves 63.57% and 38.50% ID accuracy at the 1% and 0.1% pointwise relative-error tolerances, respectively. The corresponding OOD accuracies are 56.07% and 38.24%. RISR outperforms the reported baselines using the same backbone. The results show that our residual-informed approach can improve numerical equation recovery.
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All authors Haobo Li, Wenshuo Zhang, Wenxiao Zhao, Eunseo Jung, Rui Sheng, Yushi Sun, Peiqin Zhuang, Hao Chen, Fenghua Ling

Wednesday 7 October

Symbolic Computation · Cross-listed from cs.AI

From Plausible Hierarchies to Useful Taxonomies: Evaluating Agentic Harnesses on Customer Feedback

Taxonomies are the symbolic representations through which AI systems organize evidence, aggregate patterns, and answer questions over large document collections. Over customer feedback, the category tree decides how every record is counted and routed, which problems get seen, and which team owns them. Agentic harnesses now make it easy to generate a plausible-looking hierarchy, and such trees are checked today with generic, individually scoped checks: each name fits its description, sits under the right parent, and stays distinct from its siblings. We ask a more operational question: when is a generated hierarchy actually useful as a production taxonomy? We build six taxonomies over two proprietary feedback corpora (1,940 and 5,000 records): for each corpus, a production reference and two repeated runs of the same harness under identical inputs. All six pass every generic naming and structure check, and a deeper product-coverage check even prefers the generated trees. Yet in every generated tree at least 97.7% of leaf names merely restate an ancestor's name (13.9% and 2.9% in the references), and in one, three of every four records fall under multiple top-level categories. We introduce two families of whole-tree metrics: structural discriminators test whether a tree's shape was learned from the data or imposed by its generator; team partitionability tests whether branches split feedback into groups teams can own. Trees the generic checks rate as equally correct differ by 27 percentage points in cross-branch leakage, and only one of the two beats a random split. Surface plausibility is an insufficient measure of taxonomy quality: evaluation must measure the whole tree as well as each node.
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Tuesday 6 October

Symbolic Computation · Cross-listed from cs.AI

LeanPlan: Optimal Planning with LLM-Generated Heuristics and Admissibility Proofs

Frontier large language models (LLMs) can generate heuristic functions that guide search to achieve state-of-the-art performance in satisficing planning, where any plan is acceptable. However, these heuristics are not guaranteed to be admissible and can lead to suboptimal plans. We introduce LeanPlan, the first planning system that finds optimal plans with LLM-generated heuristics whose admissibility is machine-checked. Given a domain description and training tasks, an agentic loop uses planner feedback to iteratively improve a reusable domain-specific heuristic, its admissibility proof and the required domain assumptions. LeanPlan implements the heuristic, its proof and an efficient planner with machine-checked grounding and search in Lean 4. We evaluate LeanPlan on ten domains from the International Planning Competition and three new domains, using test tasks with up to 57 times as many objects as the training tasks. With GPT-5.6 Sol in the agentic loop, we successfully generate heuristics and admissibility proofs for all these domains. With the resulting heuristics, LeanPlan usually expands fewer states than the state-of-the-art Scorpion planner and solves more tasks overall.
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All authors André G. Pereira, Augusto B. Corrêa, Felipe Meneguzzi, Jendrik Seipp

Symbolic Computation · Cross-listed from cs.AI

Towards the Automatic Synthesis of Interpretable Chess Tactics

State-of-the-art reinforcement learning agents are capable of outperforming human experts at games like chess, Go and StarCraft II. These agents do not simply take advantage of their digital hardware in being able to react and calculate faster than humans, but employ better strategies that lead to more victories. Interpreting these strategies would give human players valuable insight into how to improve their play. In this preliminary work, we propose a symbolic sub-policy model for playing chess. Inspired by chess tactics, our model attempts to incorporate domain knowledge to improve interpretability. We adapt patterns learned by an inductive logic programming system called PAL to derive our model. We contribute a divergence metric to evaluate our model against a random baseline, and find a set of tactics that is able to suggest moves of similar playing strength to a human beginner. Finally, we propose a computational evaluation scheme for the model by augmenting an off-the-shelf engine with it.
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Saturday 3 October

Symbolic Computation

A Finite Certificate for the Positive $n=11$ Vasc Inequality

We establish the Vasc cyclic inequality for all strictly positive real eleven-tuples by a finite exact certificate. Cyclic rotation places a minimum at the first position, and rank words together with cumulative gaps reduce the problem to $10!=3{,}628{,}800$ homogeneous integer polynomials of degree eleven. Independent coefficient reconstruction proves $3{,}358{,}617$ roots directly. The remaining $270{,}183$ roots are covered by $267{,}952$ ordinary midpoint certificates, $2{,}195$ complete binary subdivision certificates, and $36$ complete certificates containing partial sorting nodes. Each nontrivial leaf is checked by subtracting weighted AM-GM midpoint circuits from a positive multiple of the transformed polynomial and verifying every residual coefficient. Explicit word-set comparisons certify disjointness and exact coverage. We prove the soundness of the leaves and both subdivision rules, then recover the rational inequality by positive denominator clearing and continuity. The resulting proof combines explicit mathematical reductions with independently checked exact integer certificates.
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Symbolic Computation

Parallel Integration over Simple Radical Extensions III: Antiderivatives in Terms of Special Functions

We extend the parallel integration method for mixed towers of Part~II from elementary antiderivatives to antiderivatives in special functions. The class covered is the incomplete gamma function $\Gamma(s,\cdot)$ at rational $s$, which contains $\Ei$, $\li$, $\Si$, $\Ci$, $\erf$ and the Fresnel integrals, together with the elliptic integrals $F$, $E$, $\Pi$. Each special function enters through a kernel: a known element of the tower whose antiderivative is that function. It is either fixed by residues or added as one more column of the single linear system, and no Risch differential equation is solved. We prove where kernels can have poles; the $\erf$ kernels live in the sub-critical window of radical towers. The denominator theory, degree bounds and certificates of Part~II carry over, and new criteria decide most places that Part~II leaves to a guess. Elliptic integrals are carried by the radical, and a non-torsion residue divisor becomes a third-kind term. We prove that special functions are introduced only when necessary. Elementary answers are returned unchanged, and in strict mode a special function comes with a certificate that the integrand has no elementary integral. When no complete answer is found, a partial answer with a reduced remainder is returned. All examples are computed by a SymPy implementation and verified by differentiation.
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Friday 2 October

Symbolic Computation · Cross-listed from cs.LG

Synthesizing Physics Formulae with Transformers

Finding a compact formula that fits a set of input-output pairs and predicts outputs on unseen inputs is a fundamental problem in science. Symbolic regression automates the search for such formulae: search-based methods explore the space of possible formulae directly, while transformers pre-trained on synthetic data produce formulae of comparable quality substantially faster. Existing transformers, however, are prone to overfitting — they find formulae that fit the training data well but do not extrapolate to input ranges unseen during training. We address this by shaping the set of formulae used to train a transformer, and show that the resulting formulae extrapolate substantially better. Fine-tuning the transformer on data with noise-corrupted target values further makes the synthesized formulae robust to noise in the observations. On SRBench and LLM-SRBench our transformer synthesizes a formula in about ten seconds and extrapolates better than all evaluated methods at a comparable budget. Search-based methods surpass our accuracy only when given one to three orders of magnitude more time.
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All authors Shuwei Wang, Vadim Bulitko, Michael Youngblood, Ramon Lawrence, William Yeoh, Shinichi Nakagawa, Matthew R. G. Brown, Yu Wang

Symbolic Computation

Root isolation for analytic functions using cubic hermite interpolation

We present a root isolation algorithm for an analytic function. The method combines interval subdivision with a heuristic test based on local cubic Hermite interpolation. Whenever the function is sufficiently close to its cubic Hermite interpolant at a few sample points, we assume that the critical points of the cubic interpolant give a valid root isolation for the original function. Such an algorithm cannot, in general, provide a rigorous certification of the computed intervals. Nevertheless, extensive numerical experiments show that it is highly efficient and almost always produces the correct results. We hope that a probabilistic or exact algorithm can be derived from this work.
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Thursday 1 October

Symbolic Computation · Cross-listed from math.RA

Rational linear forms of linearizable ordinary differential equations

Every scalar ordinary differential equation of order at least three with rational right-hand side that is locally linearizable by a point transformation admits a linear form with rational coefficients over the same coefficient field. We prove this by restricting the derived symmetry algebra to a coordinate line and recovering a scalar differential operator from rational symmetry-jet data. The construction uses differential elimination and linear algebra; it does not require the symmetry generators or a linearizing transformation to be solved for. A single integer parameter suffices to choose the line.
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Tuesday 29 September

Symbolic Computation · Cross-listed from cs.LO

Machine-Checked Computational Group Theory in Lean 4: Operational Schreier-Sims Stabilizer Chains, BSGS Sifting, and Backtrack Ordered Partitions

We present gap-lean4-port (Release v0.2.0), a machine-checked formalization of foundational algorithms in computational discrete algebra and permutation group theory within the Lean 4 interactive theorem prover and Mathlib4. While modern proof assistants feature extensive abstract algebraic hierarchies, constructive and operational permutation group algorithms, such as Charles Sims' 1970 Schreier-Sims algorithm, transversal tree lookups, and backtrack ordered partition refinement, have remained largely unformalized in dependent type theory. Here, we formalize the operational algorithmic core of the Groups, Algorithms, Programming (GAP) system library across four foundational modules, proving 35 machine-checked theorems with zero unproven conjectures (sorry) and zero custom axioms under standard Lean 4 foundations (propext, Classical.choice, Quot.sound). We machine-check: (1) Schreier-Sims stabilizer chain hierarchies (StabLevel, StabChain) and the invariance of incremental transversal tree extensions (extendSchreierPoint_invariant); (2) single-level and multi-level Schreier sifting reductions (siftOneLevel, siftFull), proving that full sifting strictly fixes all base points (siftFull_fixes_all_basePoints); (3) constructive soundness and completeness of Base and Strong Generating Set (BSGS) membership testing (membershipTestKnownBase_iff_mem); (4) backtrack ordered partition cell refinement (splitCellByPred), proving mutual cell disjointness, union conservation, and exact cardinality preservation; (5) cyclotomic extension rings Z/nZ(eps_m) and machine-check GAP's exact size theorem |Z/nZ(eps_m)| = n^m; and (6) executable Bezout inverses via Extended Euclidean GCD (Nat.gcdA) over residue rings Z/nZ. The entire codebase compiles deterministically under 'lake build RequestProject' and is openly available at https://github.com/pCwOrM/gap-lean4-port.
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Symbolic Computation · Cross-listed from math.RA

Schreyer Resolutions over the Exterior Algebra

Schreyer's algorithm is usually the fastest way to determine a (typically non-minimal) free resolution of a finitely presented module over a polynomial ring. We adapt a refined version of Schreyer's algorithm to compute free resolutions over the exterior algebra, relying on relative Groebner bases. We illustrate the use of our algorithm for the computation of cohomology of coherent sheaves over projective space, which by the BGG correspondence can be computed via free resolutions over the exterior algebra. Schreyer's method relies on a tree traversal and thus has the potential for parallel computations. We report on ongoing work on a massively parallel implementation, observing that Gnawali's parallel approach over polynomial rings can be carried over to our setting.
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Monday 28 September

Symbolic Computation

CPUNeSy: Controlling Model Writes for Reliable Neuro-Symbolic Reasoning

LLMs excel at recalling statistical patterns but degrade sharply when answers must be derived, especially on multi-hop chains. Delegating derivation to deterministic symbolic executors shifts reliability to whether model-generated premises are source-supported. We introduce CPUNeSy, a serving architecture that controls model writes to symbolic state via a task-defined predicate interface and certificate gate, abstaining when grounding passes disagree. Component analysis isolates deterministic execution, restricted grounding, agreement, and source rechecking. Experiments show deterministic execution drives most accuracy recovery on derivation-heavy tasks; controlled writes mainly improve selective reliability by withholding unsupported or inconsistent answers, at a coverage cost. On multi-hop tests in law and formal math, deterministic execution recovers most of the gap over chain-of-thought and retrieval baselines, with full-pool gains up to 35.0 points. Certification is selective-serving control, not accuracy mechanism: with grounding traces fixed on ContractNLI, source rechecking removes a quarter of DeepSeek's wrong answers surviving two-vote agreement, at measurable coverage cost. When abstention is costly, routing withheld cases to an uncertified same-model fallback raises full-pool accuracy on MedCalc-Bench Verified by 13.9 and 4.9 points for Seed and DeepSeek; these gains are not from the certified channel. On LeanDojo Benchmark 4, kernel-restricted pools match BM25 recall@15 (89.3%). Gains depend on the grounder's error regime: bias-dominated grounders benefit less, consistent with our voting bound. Certificates guarantee derivational validity relative to admitted premises; semantic faithfulness to natural-language sources remains conditional on the source checker, and prospective validation is future work.
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All authors Zeyan Li, Siyuan Qiu, Shuai Zhao, Jianfeng Xu

Symbolic Computation · Cross-listed from cs.AI

MechBench: Can AI Scientific Agents Discover Mechanisms Beyond Phenomenal Laws?

Scientific discovery requires not only recovering mathematical laws that describe observable behavior, but also identifying the mechanisms that generate them. Existing benchmarks for symbolic regression and scientific agents primarily evaluate phenomenal-law recovery, leaving mechanism discovery largely untested. We introduce MechBench, a benchmark that explicitly separates these two capabilities. Each task is defined by a mechanistic model, a structured set of scientifically meaningful relations whose joint consequences entail an observable phenomenal law, while agents receive only observational data and scientific context. We evaluate mechanism recovery through mechanism probes, which query internal scientific consequences that cannot be inferred from the phenomenal law alone. To reduce reliance on memorized textbook mechanisms, we construct unfamiliar variants through controlled, scientifically interpretable mutations of canonical mechanisms, and screen for mechanistic indistinguishability to exclude ambiguous instances admitting comparable competing mechanisms. Experiments across representative scientific agents reveal a substantial phenomenal–mechanism recovery gap: for Codex with GPT-5.6-sol, phenomenal-law accuracy reaches 35.00% on the Core-set while mechanism accuracy is only 13.75%, with mechanism recovery failing in 64.29% of cases where the phenomenal law is correctly recovered. The gap widens as mechanisms become increasingly mutated, and even providing the correct phenomenal law leaves mechanism recovery below 50%. These results reveal a substantial generalization gap in mechanistic reasoning and establish mechanism discovery as a distinct challenge beyond recovering observable scientific laws.
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All authors Zihan Yu, Jiadong Zhang, Jialin Cheng, Jingtao Ding, Yong Li

Symbolic Computation · Cross-listed from cs.AI

SRHarness: A Harness for Agentic Symbolic Regression

Recent agentic symbolic regression approaches increasingly rely on large language models to analyze data, select scientific operations, and refine hypotheses over long search trajectories. In such systems, performance depends not only on the underlying model and search strategy, but also on the runtime infrastructure that supports scientific search. We introduce SRHarness, a domain-specific harness for agentic symbolic regression built around three mechanisms: composable scientific actions that provide a common interface over raw, transformed, and candidate-derived quantities; persistent scientific state that retains evaluated hypotheses and exposes compact model-facing views; and trajectory lifecycle management that coordinates continuation, branching, restart, and termination. On LLM-SRBench, SRHarness consistently improves both numerical generalization and symbolic recovery under matched LLM backbones. With DeepSeek-v4-flash-0731, it achieves 93.69% symbolic accuracy on LSR-Transform, compared with 62.16% for SR-Scientist, and retains 72.97% accuracy on an anonymized variant that removes scientific descriptions and variable semantics, versus 39.64% for SR-Scientist. Under the same DeepSeek-v4-flash-0731 backbone, SRHarness also substantially outperforms Codex (72.97% vs. 20.72%) and reaches performance comparable to Codex with GPT-5.5, while simply providing Codex with the same scientific tools does not reproduce this advantage. These results show that effective agentic symbolic regression depends not only on models or tools, but also on structured runtime support for organizing scientific actions, accumulated hypotheses, and long-horizon search.
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All authors Zihan Yu, Shixuan Zhou, Hao Huang, Jingtao Ding, Yong Li

Symbolic Computation

A Practical Approach To Verifying Structural Invariants In Colored Petri Nets

Structural analysis is a core method in Petri Net (PN) research, offering a perspective complementary to state-space techniques while avoiding many of their limitations. It is well studied for classical PNs but far less for High-Level Petri Nets (HLPN). Symmetric Nets (SN), a common HLPN formalism, use compact annotations to encode behavioral symmetries, enabling the construction of a symbolic reachability graph (and a lumped Markov chain in stochastic SN) and the execution of symbolic discrete-event simulations. During the past two decades, structural techniques tailored to SN have been developed, notably supported by the SNexpression tool. This tool implements a formal calculus designed for the computation of symbolic structural relations, including, but not limited to, conflict relations and causal dependencies. Here, we focus on using this calculus to verify semi-automatically symbolic structural invariants, a task currently feasible only for certain restricted SN subclasses. We focus specifically on (semi)flows and briefly discuss an approach through which a flow generative family can be generated, at least theoretically. We further briefly outline a framework for the formal verification of a broader class of invariant properties. An extended formulation of the SN formalism is employed, which demonstrably satisfies the closure property with respect to fundamental functional operators. The core concepts are elucidated by means of representative examples throughout the exposition.
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Symbolic Computation

Semi-automated Verification of Symbolic Invariants In Extended Symmetric Nets

Structural analysis is central to Petri Net (PN) research, complementing state-space methods while avoiding their combinatorial issues. It is well studied for classical PNs but much less for High-Level Petri Nets (HLPN). Symmetric Nets (SN), a common HLPN formalism, use compact annotations to encode behavioral symmetries, allowing symbolic reachability graphs and associated lumped Markov chains for stochastic SN. In the past two decades, specific structural techniques for SN have emerged, notably the SNexpression tool, which implements a calculus for symbolic structural relations such as conflict and causality. We propose using this calculus to semi-automatically verify symbolic structural invariants, currently possible only for restricted SN subclasses, for an extended SN formalism (ESN) closed under key functional operators. We focus on flows and outline, at least in theory, how to construct a flow-generating family. We also sketch a framework for formally verifying a wider range of invariant properties. Representative examples illustrate the main concepts.
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Symbolic Computation · Cross-listed from cs.LO

Formalizing the Omega Test in Dafny

We present a formalization in Dafny of the Omega Test, an algorithm used to decide the satisfiability of a system of inequalities. The implementation defines executable representations for rational numbers, linear expressions, inequalities, equalities, divisibility constraints, and systems of constraints, together with their semantic interpretation through valuations. We fully specify and verify the implementation in Dafny. We describe the lessons learned and how the formalization process led to new insights into the algorithm.
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Sunday 27 September

Symbolic Computation

LieDiscover: Adaptive Symbolic Library Construction for Explicit Open-form Symmetry Discovery

Discovering underlying symmetries from data has emerged as a crucial challenge in scientific discovery. Existing data-driven methods for symmetry discovery fail to determine the exact number and mathematical form of unknown infinitesimal generators. Recent explicit methods represent generators using a predefined function library and identify them through algebraic optimization, but they often struggle to capture complex symmetries involving high-order polynomials or transcendental functions. To address this limitation, we formulate symmetry discovery as a joint optimization problem over the function library and coefficients. We propose a novel framework that leverages an encoder-decoder architecture to dynamically generate symbolic expressions and expand the library. This generation process is optimized via reinforcement learning, which accelerates the exploration of the symbolic search space through step-wise rewards. Experiments demonstrate that LieDiscover can successfully uncover open-form infinitesimal generators involving high-order polynomials or transcendental functions, which remain intractable for existing methods. The discovered symmetries also improve performance in downstream PDE solving and discovery tasks.
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All authors Xinxin Li, Jianming Ma, Xingyu Cui, Da Li, Juan Zhang, Junping Yin

Symbolic Computation

The Moment Method for Computing Real Points of Sparse Polynomial Systems

One of the most important problems in computational algebra is the computation of real solutions of a polynomial system. Lasserre, Laurent, and Rostalski introduced a numerical method to compute the real radical of an ideal defining a finite set of real points. Their method is based on moment matrices and reduces the problem to solving a semidefinite program. In this work, we build on this method and on the work of Laurent and Mourrain to exploit the sparsity of the input polynomials. For this purpose, we extend the theory of moment matrices to the setting of affine toric varieties. We prove that, for sparse polynomial systems, this approach allows us to recover real points on affine toric varieties. Moreover, we show that a projection of the spectrahedron associated with the semidefinite program is, in fact, a polytope, and we propose a variation of the method to compute only one real solution of the system.
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Saturday 26 September

Symbolic Computation · Cross-listed from cs.DS

A 51-Addition Alternative-Basis Kernel for Rank-23 $3\times3$ Matrix Multiplication

We give a rank-23 algorithm for $3\times3$ matrix multiplication using 51 additions and subtractions in alternative bases. The input and output conversions require five further additions, giving 56 additions in ordinary coordinates. The construction combines linear-program reduction with a search over sparse basis changes, and the resulting programs are distributed as a machine-checkable certificate. We verify correctness by exact coefficient expansion and distinguish the kernel cost from the cost of a complete multiplication.
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