Machine Learning · Cross-listed from cs.CL
Domain-Agnostic Neural Topic Modeling with Contextual Token-Level Semantic Graph Representation
Seung-Won Seo, Won Ik Cho and Yongmin Yoo
Recent advances in neural topic models with pre-trained
language models (PLMs) have achieved strong performance by leveraging general-domain pre-training, yet their topic interpretability often degrades on specialized corpora. This limitation primarily stems from the geometry of the
embedding space, where domain-specific terms unseen during pre-training collapse into an indistinguishable region, and neither domain-specific re-training, word-level graph enrichment, nor parameter-efficient fine-tuning can restructure this space without inheriting the capacity ceiling of the underlying encoder. Our key insight is that a learnable graph layer operating on
token-level PLM
embeddings can acquire corpus-specific semantic structure that the frozen encoder lacks, because
token-level graphs preserve document-local context that word-level representations discard and joint optimization with the topic objective reshapes
embedding geometry directly from target-domain evidence. We instantiate this insight as DARTopic, a domain-agnostic framework that constructs
token-level semantic graphs from frozen PLM
embeddings and jointly trains a GNN encoder with topic inference. Across three
benchmarks spanning general, biomedical, and legal domains, DARTopic consistently outperforms strong baselines in topic coherence and document clus- tering without any encoder fine-tuning, while demonstrating robustness to PLM choice and favorable runtime efficiency over fine-tuning based alternatives.
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Machine Learning · Cross-listed from cs.CV
CoM$^3$eT: A foundation model for medical image analysis through federated, multidimensional context integration
J. Raphael Schäfer, Kai Geissler, Till Nicke et al. (+27 more)
Medical foundation models improve generalization when training AI models with limited labeled data, but remain confined to a single specialty, such as pathology or radiology, and to either sparse or dense outputs, such as classification or
segmentation. Here, we present CoM$^3$eT (Co-representation Multidimensional Multitask Medical
Transformer), a medical
vision foundation model that unifies pathology and radiology, sparse and dense predictions, and two- and higher-dimensional inputs by modeling multidimensional context with
attention. CoM$^3$eT outperformed other medical foundation models in an open competition spanning five tomographic, four whole-specimen, and three two-dimensional
datasets, covering sparse and dense prediction tasks as well as report generation. When adapted across diverse clinical applications, training fewer than 2.5% of parameters achieved performance comparable to full fine-tuning, enabling research without access to high-performance GPU clusters. Applied to
federated learning across hospitals, this approach achieved performance comparable to pooled-data training over internet connections and with consumer-grade hardware.
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All authors J. Raphael Schäfer, Kai Geissler, Till Nicke, Chiara Tappermann, Karoline Heber, Eike Petersen, Habib Mergan, Lars Ole Schwen, Nick Weiss, Annika Gerken, Jan Hendrik Moltz, Tom Bisson, Isil Dogan O, Tim-Rasmus Kiehl, Norman Zerbe, Sefer Elezkurtaj, Robin S. Mayer, Nadine Flinner, Peter Wild, Isabel Dahm, Felix Peisen, Heinrich von Busch, Robert Grimm, Sebastian Arndt, Lisa Siegler, Matthias Stefan May, Antje Prasse, Natalia Artysh, Fabian Kiessling, Johannes Lotz
Machine Learning
SAUL: Sharpness-Aware Augmented-Lagrangian Unlearning
Jaewan Choi, Junyoung Yang and Sangdon Park
Machine unlearning in Large
Language Models (LLMs) faces a critical trade-off between erasing target knowledge and preserving general utility. We propose SAUL (Sharpness-Aware Augmented-Lagrangian Unlearning), which formulates unlearning as a constrained minimization problem following the principle of "forget enough, but no more than necessary." At its core, SAUL formulates forgetting as an explicit constraint with a prescribed satisfaction criterion, whereas prior unlearning methods typically specify the desired level of forgetting implicitly through optimization objectives. An augmented Lagrangian controller adaptively adjusts forget-side pressure according to constraint violation and can eventually deactivate the forget-side update as the prescribed criterion remains satisfied. Sharpness-aware updates on both retain and forget objectives, together with a dual-optimizer design that maintains role-separated states, further stabilize the resulting unlearning dynamics. We evaluate SAUL on the TOFU, WMDP, and MUSE
benchmarks, demonstrating favorable forgetting-utility trade-offs over representative sharpness- and perturbation-based baselines under
benchmark-specific forgetting criteria. Beyond the complete SAUL framework, we further show on TOFU that applying the augmented-Lagrangian controller as a drop-in modifier to representative baselines improves their post-forgetting utility, demonstrating the practical value of explicit forgetting control.
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Machine Learning
The Trade-off Between Covariate Dependence and Latent Structure in Representation Learning
Małgorzata Łazęcka and Ewa Szczurek
Disentangled representation learning seeks latent representations whose indicidual dimensions each align with a distinct
covariate. Unsupervised approaches typically target latent dimension independence, yet this gives no guarantee that the resulting dimensions align with semantically meaningful
covariates. Supervised approaches structure the latent space using observed
covariates, but under correlated
covariates they cannot simultaneously control one-to-one latent-
covariate alignment and latent independence. We introduce a unified, supervised framework that couples latent dimension-
covariate dependence with constraints on the latent structure. Within this framework, we show an inherent trade-off, where enforcing latent independence or exclusive one-to-one latent-
covariate dependence comes at a provable cost in latent-
covariate alignment. We prove that the resulting disentanglement regimes are ordered by the strength of that
alignment. Each regime admits a closed-form transformation of the latent space. We apply these transformations post-hoc to realign the representations of pretrained models such as CLIP, DINOv2, and ViT, and we fold them into the inference of informed factor analysis (iFA), a probabilistic model with
covariate-informed factors. On simulated and real multi-omics data, we show that both post-hoc
alignment and iFA enable controllability of structured latent representations.
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Machine Learning · Cross-listed from cs.CV
Convolution-Free Holistic Multivariance Decomposition Layer for Efficient Hyperspectral Image Classification Tensor Networks
Süha Tuna and Ülker Başar
Feature extraction for hyperspectral image classification is conventionally addressed using rigid tensor decompositions that fail to capture complex spatio-spectral interdependencies, or heavily parameterized convolutional neural networks that are computationally expensive. To overcome these limitations, this work introduces the Holistic Multivariance Decomposition (HMD) framework as a novel, end-to-end differentiable neural network layer. By explicitly separating independent single mode variations from cooperative higher dimensional interactions via learnable,
matrix valued supports, the proposed HMD-0, HMD-1 and HMD-2 approximants are optimized jointly with a downstream classifier via backpropagation. Comprehensive evaluations across three
benchmark HS
datasets demonstrate that the higher level HMD layers achieve superior classification accuracy compared to classical learnable tensor baselines, including Tucker, Canonical Polyadic, and Tensor Train decompositions. Furthermore, HMD-1 and HMD-2 achieve a generalization capacity and training stability comparable to standard 2D and 3D-CNNs while requiring significantly fewer feature extractor parameters. These results demonstrate that the HMD framework provides a structurally robust substitute for traditional convolution in multidimensional HS image classification, offering high parameter efficiency and stability throughout the optimization process.
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Machine Learning
Optimizing Multi-Market Participation of Battery and Electrolyser Systems Based on Field Performance
Chunyang Zhao, Stoyan Trenchev, Shi You et al. (+1 more)
The increasing share of renewable energy in power systems creates a need for fast-response and flexible resources to maintain system stability. With the expansion of electricity
markets and ancillary service products, opportunities arise to stack revenues across multiple services. Long-term Power-to-X (PTX) electrolysers and short-term battery energy storage systems (BESS) are prevalent flexible resources, yet most studies neglect real hardware behavior, such as ramp limits, efficiency, and setpoint-tracking accuracy. This work presents experimental and modeling results for a 55 kW/79 kWh BESS and an electrolyser comprising three 2.4 kW units. Key characteristics are identified through measurements and embedded into a price-driven optimization framework for participation in the Danish electricity and ancillary service
markets, utilizing real
market data from 2022 to 2025. The optimized daily profits for multi-
market participation are 1,749.27 DKK and 289.46 DKK for the BESS and electrolyser, respectively. With the demonstrated business cases for BESS and PTX systems, this work highlights the importance of incorporating experimental performance when evaluating participation across multiple
markets and years.
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All authors Chunyang Zhao, Stoyan Trenchev, Shi You, Chresten Træholt
Machine Learning
A Privacy Study of Sparse Collaborative Inference
Maximilian Andreas Hoefler, Karsten Mueller and Wojciech Samek
Collaborative inference (CI) splits a model between an edge device and a server, whereby the client computes an intermediate activation, transmits it, and the server completes the computation. This raises two concerns, the communication cost of the transmission and the risk that it reveals private information about the input. Recent work reduces this cost by sparsifying activations and
entropy-coding the result. Sparsity has also been argued to improve
privacy, on the intuition that transmitting fewer values reveals less about the input. We test this claim by decomposing the sparse activation into the retained values and the set of positions they occupy, and by reconstructing inputs from each component in isolation. We find that sparsification reduces the leakage far less than it reduces the transmission cost, and that the remaining risk shifts to the positions, which prior analyses treat as side information for decoding. Across natural-image and face
datasets, the positions alone constitute a serious
privacy risk, enabling high-fidelity reconstructions and re-identification of individuals. The leakage from the positions persists even when both the transmission cost and the task utility are low. We conclude that the positions of sparse activations should be treated as sensitive transmitted data and audited carefully in the context of collaborative inference. Code is available at https://github.com/an7123/
Privacy-Study-Sparse-CI.
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Machine Learning
Beyond Peak Backlog: Conditional Energy and Temporal Geometry in Capacity-Constrained Delayed Bandit Optimization
Anling Xiang, Yuwen Yang and Yang Shen
What is the right delay complexity when a learner can track only $C$ pending feedback items and discarded feedback is permanently lost? Existing one-point bandit convex optimization guarantees in this model pay $\sqrt{T\sigma_{\max}}$, where $\sigma_{\max}$ is the peak backlog, although unlimited tracking admits the sharper $\sqrt{d_{\mathrm{tot}}}$ dependence on total delay. We introduce a scheduler-side conditional-energy interface that separates rate adaptation from the one-point perturbation filtration and handles the dependent importance weights created by randomized admission. Under the same semi-clairvoyant oracle and pathwise hard-capacity contract, this yields an untuned learner whose delay term scales as $O(\sqrt{E_C d_{\mathrm{tot}}})$, with only an explicit restart factor $E_C$; a public constant-factor peak bound removes this factor while $d_{\mathrm{tot}}$ remains unknown. Under strong convexity, the same interface yields the temporal cost $H_A(d)=\sum_t \sigma_t/(A+t)$. Two delay vectors with identical delay multisets, $d_{\mathrm{tot}}$, $\sigma_{\max}$, and capacity can nevertheless have polynomially different minimax regret, showing that timing matters under
curvature even when aggregate delay summaries agree. Finally, a continuous hard family converts tracking capacity into a zeroth-order query budget and gives a complementary capacity-starvation lower endpoint. The upper bounds require $C\ge \ln T+1$ and do not constitute a complete capacity minimax characterization.
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Machine Learning
Quantifying the Gap Between Laboratory Battery Test Patterns and Field Duty Profiles
Chunyang Zhao and Chresten Træholt
Laboratory battery tests provide the main empirical basis for battery performance and degradation studies, but their operating patterns do not directly represent field duty profiles. This paper quantifies the gap by comparing six accessible evidence sources covering controlled cycling, drive-cycle testing, dynamic cycling, NMC811 laboratory ageing, a real electric-vehicle charging trace, and fleet-scale electric-vehicle state-of-health (SOH) data. The analysis combines usage frequency, usage intensity, usage C-rate, and a duty-structure index (DSI) based on normalized current dispersion and ramping. The representative single-segment DSI ranges from 0.630 for the field source trace and 0.699 for NASA to 2.936 for Oxford and 2.855 for Imperial, while usage C-rate ranges from 0.14-0.40 for Imperial, NASA, Stanford, and Hyundai to 2.00 for Oxford. Long-term ageing also differs: the 80 percent retention region occurs near 351 NASA cycles, 6292 Oxford checkpoints, and 1019 Stanford cycles. In chemistry-aligned NMC/NCM evidence, Imperial retains 0.813 under standard cycling and 0.865 under drive-cycle ageing, while the field source has median SOH 0.889 with visible dispersion. Field operation further shows a median use intensity of 137.2 km/day and 56.9 percent of charges ending at or above 95 percent SOC. These results show that battery performance metrics are conditional on the duty pattern that generated them; application-oriented studies should report explicit duty-profile descriptors together with chemistry, capacity, and ageing metrics.
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Machine Learning
Conditional Evaluation of Language Models with Cheap Auxiliary Signals
Zhi Zhang, Lingfeng Lyu, Yue Kang et al. (+1 more)
Aggregate accuracy hides where models succeed and fail. Estimating conditional performance profiles from gold labels alone is expensive, while cheap auxiliary signals such as LLM-judge scores, pairwise comparisons, confidence scores, and judge-disagreement features can be collected for every
benchmark item but are often biased or miscalibrated. We propose LACE (Local Augmented Control-Variate Evaluation), a semi-supervised
estimator for conditional LLM evaluation. The key step is local centering: after subtracting the conditional mean of a cheap signal within the target profile region, any linear augmentation has zero conditional mean and therefore cannot change the estimand. The augmentation coefficient is used only for efficiency, and a local ridge control variate combines a gold-label residual mean from the labeled subset with a cheap-signal mean from the full item pool. We prove calibration-free identification, unbiasedness for grouped profiles, local oracle optimality within centered linear augmentations, and first-order adaptivity to the estimated coefficient. The resulting gain formula is governed by a population local $R^2$, which characterizes how the efficiency attainable from the cheap signals varies across profile values. We also derive corresponding
estimators for direct paired model gaps and deployment-weighted scores. We empirically evaluate the primary performance-profile
estimator on MATH-500, ScienceQA, MMLU, WinoGrande, HellaSwag, TruthfulQA, GSM8K, and ARC.
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All authors Zhi Zhang, Lingfeng Lyu, Yue Kang, Doudou Zhou
Machine Learning
Multi-Granularity Sentiment Integration for LLM-Based Multimodal Sentiment Analysis
Shanshan Lin, Yuesheng Wu, Chao Chen et al. (+4 more)
Multimodal sentiment analysis (MSA) aims to predict sentiment polarity and intensity from heterogeneous inputs such as text, audio, and
vision. While large
language models (LLMs) offer strong semantic priors for MSA, effectively incorporating audio and visual signals effectively remains challenging. A key challenge is that audio and visual sentiment cues evolve over different temporal scales, yet many LLM-based methods compress these signals through shallow projection or coarse pooling before fusing them with text, which can weaken cross-modal
alignment and erase fine-grained affective information. We propose MGSI, a multi-granularity sentiment integration framework for LLM-based MSA. MGSI first encodes audio and visual streams at short-, medium-, and long-range temporal scales, preserving both local variations and global affective trends. It then refines non-text features through text-guided
alignment, and applies polarity- and intensity-aware enhancement to better handle ambiguous and near-neutral samples. The resulting
multimodal representation is finally compressed into a small set of pseudo-
tokens for efficient conditioning of a frozen LLM. Experiments on four public
benchmarks show that MGSI substantially outperforms frozen-LLM baselines and remains competitive with strong
multimodal methods. Further ablation and sensitivity analyses support the effectiveness of multi-granularity temporal modeling, text-guided refinement, and adaptive sentiment calibration.
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All authors Shanshan Lin, Yuesheng Wu, Chao Chen, Yizhe Yang, Zhihao Chen, Zexian Yang, Xiangwen Liao
Machine Learning · Cross-listed from cs.CR
Decorrelation Is Not Complementarity: Skill, Not Lineage, Governs Trusted-Monitor Ensembles
Anik Jha
Trusted monitoring has a cheap, trusted model score a stronger untrusted model's actions, and a diverse ensemble of them beats a single stronger monitor at matched cost. They are built by minimising average pairwise correlation, and that paper's twelve monitors shared one base model, leaving open what supplies the diversity. We study 24 open-weight monitors spanning nine pretraining lineages and a 29x range of detection skill (pAUC at 10 percent FPR, 0.028 to 0.803) on backdoored code. The metric used to build panels does not predict what a panel is for, and we can say why. Agreement on attack items splits into a shared-detectability signal component and an idiosyncratic error component, which predict ensemble gain with opposite sign (Spearman -0.25 and +0.26), so their sum, the metric actually used, predicts it barely at all (+0.05); the cancellation holds in 7 of 8 evaluations. Skill acts on signal (+0.53) while error stays flat (-0.01), which is why a monitor's own skill predicts its agreement with the pool (Spearman 0.84, n = 24, permutation p below 0.0001). Pretraining lineage is the obvious way to buy decorrelation, and it does not pay. At matched member capability, cross-lineage panels detect no better (permutation p = 0.13), and lineage barely moves the metric either (+0.064, p = 0.18). We report that against ourselves: on our own 22-monitor pool the same test read +0.104 at p = 0.037 until two monitors were added. An earlier pool topping out at pAUC 0.23 had already invalidated another analysis. Such a quantity is a property of the pool assembled. Panel gain over the best member falls monotonically with panel skill (-0.66 at k = 2, -0.70 at k = 3), and no correlation-weighted selection beats picking the single best monitor out of sample. Across six attacker models the gain result holds in all six, the agreement and cancellation results in five of six.
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Machine Learning
Understanding and Stabilizing Deep Q-Learning via Controlled Bootstrapping and Regulated Value Dynamics
Bozhou Chen, Yongyi Wang, Hanyu Liu et al. (+2 more)
Deep Q-learning (DQL) has achieved remarkable empirical success in reinforcement learning, yet its training process remains notoriously unstable. Existing studies often attribute instability to isolated factors such as overestimation bias or representation learning issues, lacking a unified understanding of how different sources of instability interact during recursive value estimation. In this work, we provide a systematic analysis of instability in deep Q-learning from three complementary perspectives: operator-level bias in Bellman bootstrapping,
estimator-level sensitivity of greedy action selection to regression noise, and parameter-dynamics imbalance under aggressive data reuse. We identify a reward-triggered self-reinforcing trap and characteristic parameter spike dynamics, then derive stabilization principles for controlled bootstrapping, ensemble
quantile estimation, and spike-based parameter regulation. Experiments on Atari-100K and Procgen demonstrate competitive performance and improved training stability.
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All authors Bozhou Chen, Yongyi Wang, Hanyu Liu, Xionghui Yang, Wenxin Li
Machine Learning
Demystifying Oversmoothing in Sheaf Neural Networks: An Index-Theoretic Criterion
Junwen Dong, Yuhan Peng, Hao Li et al. (+2 more)
To combat oversmoothing in Graph Convolutional Networks, Sheaf Neural Networks (SNNs) were proposed as a generalization by equipping the graph with a sheaf structure and replacing the graph
Laplacian with a sheaf
Laplacian $\mathcal{L}$. Existing analyses connect sheaf
diffusion to oversmoothing via the harmonic space ($\ker\mathcal{L}$), taking its absolute dimension as an indicator of anti-oversmoothing capacity. However, absolute dimension alone is not a reliable measure: certain sheaf configurations inflate $\dim \ker \mathcal{L}$ while their harmonic sections remain entirely constant, without enriching discriminative capacity. We instead introduce the first relative,
geometric approach, yielding a precise characterisation of anti-oversmoothing capacity. Under natural conditions on stalk transportation and global sheaf structure, we establish an index-theoretic comparison criterion showing that one sheaf's harmonic space genuinely contains another's beyond trivial inflation. We illustrate this with a concrete instance and further introduce GyroSheaf, a sheaf with curved gyrovector-space stalks, extending the criterion to the non-linear setting via local tangent-space linearization. Experiments across ten models confirm the theoretical criterion: sheaf models violating the criterion collapse despite possessing index jumps, while compliant models maintain depth-stable representations.
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All authors Junwen Dong, Yuhan Peng, Hao Li, Huitao Feng, Kelin Xia
Machine Learning · Cross-listed from eess.SP
RadioVIL: Anomaly-Aware Diffusion Models for Radio Map Inpainting and Zero-Shot Vehicle Localization
Ruixin Zhao, Xiucheng Wang, Qiming Zhang et al. (+3 more)
High-precision
radio map construction is essential for emerging 6G Integrated Sensing and Communication (
ISAC) applications, including digital twins and intelligent transportation. However, existing deep learning methods predominantly treat this as a pure image completion task, resulting in over-smoothed reconstructions that fundamentally erase high-frequency scattering signatures of dynamic physical entities such as hidden vehicles. To overcome this, we propose RadioVIL, an efficient two-stage framework that reformulates joint
radio map inpainting and zero-shot vehicle localization as a prior-guided physical inverse problem. Specifically, we first train a Denoising
Diffusion Probabilistic Model (DDPM) to capture the structural generative prior of the environment. During inference from highly sparse measurements, we employ a
Diffusion-based Mediating Intermediate Layer Optimization (DMILO)
algorithm. By optimizing an L1-regularized sparse deviation term, DMILO mathematically isolates vehicle scattering anomalies layer-by-layer without unfolding the entire denoising chain. Extensive experiments demonstrate that while conventional reconstruction baselines fail to detect hidden vehicles, and the zero-shot
diffusion baseline achieves only limited detection ability due to forced semantic harmonization, RadioVIL preserves authentic physical textures, yielding the best LPIPS of 0.0587 in our evaluation. Uniquely, it unlocks accurate zero-shot vehicle localization directly from sparse
radio maps, securing a 75.20% Recall and a 3.31-meter average error, paving a robust way for
ISAC at the 6G edge.
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All authors Ruixin Zhao, Xiucheng Wang, Qiming Zhang, Nan Cheng, Ruijin Sun, Conghao Zhou
Machine Learning · Cross-listed from cs.IR
Domain-Specific Text Embedding Models for Entity Resolution
Khajesh Sapram, Srivardhani Raju and Kishore Konda
General-purpose text
embedding models are designed to capture semantic similarity but are not optimised for distinguishing entity records that represent the same real-world business or person. This limitation affects applications such as entity resolution and duplicate record
retrieval, where small textual differences may either preserve or change identity. This paper investigates whether domain-specific triplet fine-tuning can adapt pretrained
embedding models for identity-sensitive
retrieval. A synthetic
dataset of business and person records was created with identity-preserving variations and challenging non-matching examples. Two widely used
embedding models were evaluated before and after fine-tuning using a margin-based similarity evaluation. The results show substantial improvements in separating true matches from highly similar non-matches, demonstrating that domain-specific triplet training can effectively reshape general-purpose
embedding spaces for entity
retrieval. These findings suggest that targeted fine-tuning provides a practical approach for improving
embedding models in data quality management and information
retrieval applications.
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Machine Learning · Cross-listed from cs.CR
Digital Twin Degradation: Detecting Cyber Physical Attacks via Temporal Inconsistencies
Konstantinos E. Kampourakis, Vasileios Gkioulos and Sokratis Katsikas
Digital Twins (DTs) are increasingly used to monitor and analyze Cyber Physical Systems (CPS). However, in
adversarial environments, the fidelity of a DT cannot be assumed. Communication delays, data manipulation, sensor degradation, or partial information loss may cause the DT state to diverge from the physical process it represents. Such divergence creates temporal inconsistencies that may reveal cyber physical attacks. This paper proposes a detection framework that monitors temporal consistency between the physical system and a potentially degraded DT view. A DT predictor is trained exclusively on normal system behavior to model short-term system dynamics. During operation, discrepancies between predicted and observed states are transformed into multi-horizon temporal features capturing the magnitude, persistence, and
evolution of prediction residuals. An unsupervised density model characterizes normal consistency patterns, while a sequential change detection mechanism identifies sustained deviations indicative of attacks. The approach is evaluated on three widely used Industrial Control System (ICS)
datasets, SWaT, HAI, and BATADAL, under multiple DT degradation scenarios, including time desynchronization and partial observability loss. Results show that temporal inconsistency patterns enable reliable event-level attack detection with bounded false alarm rates and low detection latency. The proposed method achieves up to 98% detection reliability on SWaT and false alarm rates below 2%. Unlike conventional anomaly detection methods, the proposed framework does not require attack signatures or labeled attack data and remains effective even when the DT view is degraded. These results suggest that DT degradation, often treated as a limitation, can instead serve as a useful signal for cyber physical security monitoring.
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Machine Learning
A Tree-Structured Approach for Phishing Template and Attacker Attribution Analysis
Unai Agirre, Imanol Jerico, Felipe Castaño et al. (+2 more)
Phishing remains a persistent and evolving cybersecurity threat, with attack volumes reaching record levels. This growth is driven by the industrialization of phishing through widely available phishing kits and reusable templates, which enable cybercriminals to rapidly generate and deploy large numbers of fraudulent webpages. Although surface-level attributes may differ across these websites, their underlying structures often exhibit significant similarities. However, most existing defenses rely on reactive blocklists or supervised classification models that focus on individual phishing instances, limiting their ability to identify structural reuse and detect coordinated phishing campaigns. To address this limitation, this study investigates whether HTML structure can serve as a robust fingerprint for identifying phishing template reuse. We model webpages as Document Object Model (DOM) trees and extract structural features, optionally enriched with HTML tag-based content information. These representations are then clustered using unsupervised learning methods to group structurally similar webpages. Three clustering
algorithms are evaluated and compared, while also analyzing how the depth of the extracted DOM-tree affects cluster formation and overall clustering performance. Finally, cluster quality is also evaluated both quantitatively and qualitatively, including a novel level-wise Jaccard Distance Score and manual inspection supported by visualization tools. Results demonstrate that structural representations of webpages can effectively reveal hidden similarities across phishing sites, enabling the detection of emerging and zero-day templates and supporting the analysis of coordinated phishing threats
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All authors Unai Agirre, Imanol Jerico, Felipe Castaño, Andrea Venturi, Francesco Zola
Machine Learning
REFLEX: Reflexive Equilibrium Fixed-point Learning for Endogenous eXchanges
Vignesh Nagarajan and Shriraghav Ashok
In over-the-counter corporate bond
markets, dealers compete for client trades by quoting bid and ask prices. Tighter quotes attract more business, but also informed customers more likely to trade ahead of adverse price moves, leaving the dealer holding the risk. As dealers increasingly use machine learning to set quotes, they retrain these models on the trades their own quotes attract, creating a feedback loop in which each model reshapes the
market that generates its next training data. The question is therefore not only whether a quoting model performs well, but whether the
market it creates stays stable as the model learns from it. Existing performative prediction theory gives a sharp stability condition, yet expresses it through abstract properties of the learning objective a trading desk cannot measure before deployment. We introduce REFLEX, a framework that replaces those unobservable quantities with three measurable features of dealer behavior: how strongly trading volume responds to tighter quotes, how sharply the dealer's objective bends around its optimum, and how quickly informed flow increases as spreads narrow. REFLEX combines these into a single retraining modulus, a pre-deployment stability margin estimated from a desk's own quote and execution history that predicts whether repeated retraining will converge or amplify itself. In simulation, predicted and measured stability agree within 8%, and competing dealers increase instability by 1.74x with two and 3.16x with three, as predicted. Where ordinary retraining becomes unstable at modulus 1.21, a structurally anchored correction converges as blind retraining collapses. Calibrated over 36 years of public
market data, stability headroom falls roughly 4.4x for investment grade and 4.3x for high yield from calm to crisis regimes. Ultimately, REFLEX turns an abstract convergence
theorem into a
market-level safety margin.
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Machine Learning · Cross-listed from math.NA
Asymptotics-guided learning and symbolic regression for dispersive resonances
Konstantinos Alexopoulos and Josselin Garnier
We study resonance prediction in dispersive media, formulated as nonlinear spectral problems for volume integral operators. The main idea is to use asymptotic analysis not only as a baseline approximation, but also as a guide for constructing predictive correction models. We learn the residual between asymptotic and reference resonances using features suggested by the subwavelength expansion, including the logarithmic scales specific to two dimensions. The resulting corrections substantially improve single-resonator and dimer predictions, and symbolic regression produces compact formulas for the learned residual. The results show that asymptotic analysis can be used not only to approximate resonances, but also to design the feature space in which data-driven corrections become accurate, low-dimensional, and interpretable.
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Machine Learning · Cross-listed from cs.AI
When Single-Dataset Conclusions Fail: A 45-Task Study of Threshold Tuning and Resampling for Imbalanced Classification
Diyorbek Musaev
Class-imbalance handling is routinely evaluated on a single
benchmark dataset, and the resulting conclusions are reported as if they were properties of the method. We show this practice is unsafe. On the public Kaggle credit-card fraud
dataset, under a leakage-free nested cross-validation protocol in which the decision threshold is selected on a held-out inner validation fold, a plain Random Forest at the default 0.5 threshold attains F1 = 0.861 +/- 0.021, and threshold tuning yields it no benefit (delta-F1 = -0.002). Read alone, this supports an appealing conclusion: for a well-calibrated ensemble, imbalance handling is unnecessary. We then apply the identical protocol to 45 binary tasks spanning imbalance ratios from 1:1.5 to 1:178 (2,025 model fits, four model families). The conclusion reverses. Random Forest benefits most from threshold tuning across the suite (delta-F1 = +0.101 +/- 0.134), not least, while three other families replicate their fraud-
dataset behaviour almost exactly. SMOTE likewise harms the fraud
dataset but helps across the suite (mean delta-F1 = +0.076; 138 wins, 39 losses; Wilcoxon p = 2.7e-17). Two further results. Threshold-tuning benefit is non-monotonic in the imbalance ratio: near zero below 1:5, peaking at +0.120 in the 1:15-1:40 band, declining to +0.045 beyond 1:100 - explaining why the fraud
dataset, at 1:577, is an unrepresentative place to study the question. And we reject an intuitive heuristic: validation-set calibration error does not predict tuning benefit (expected calibration error r = -0.087; Brier r = +0.137), so calibration diagnostics cannot tell a practitioner whether tuning is worthwhile. We release the protocol, the 45-task harness, and all per-run metrics.
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Machine Learning
Multi-Feature Riemannian Hypergraph for Online Test-Time Adaptation of Motor Imagery Brain-Computer Interface
Siqi Li, Zhi Li, Tong Liu et al. (+5 more)
In clinical motor imagery
brain-computer interface (MI-BCI) decoding, cross-day transferability and online operation remain two critical challenges. Hypergraphs can improve transferability by capturing higher-order sample relationships, yet existing hypergraph-based methods for online
emotion recognition neglect the cross-day benefits of Riemannian geometry widely adopted in
EEG transfer learning. To bridge this gap, we propose the Multi-feature Riemannian Hypergraph (MRieHy), a framework tailored for online test-time adaptation in MI-BCI decoding that leverages Riemannian geometry to strengthen cross-day transferability. MRieHy first computes Riemannian means of covariance
matrices from cross-day training data to align multi-day distributions. It then constructs a hypergraph over covariance
matrices using Riemannian distance, complemented by a second hypergraph over deep features built with cosine similarity. The two hypergraphs are fused via adaptively learned combination weights, jointly optimized with the label projection
matrices. During online testing, MRieHy maintains a first-in-first-out buffer of recent samples, performs Riemannian
alignment on the buffered data, and decodes with the learned hypergraph. Extensive experiments on a private four-class ECoG
dataset and two public four-class
EEG datasets validate that MRieHy achieves notable performance gains over state-of-the-art baselines.
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All authors Siqi Li, Zhi Li, Tong Liu, Shuai Zhang, Yanfei Jia, Zhiqiang Yi, Jue Xie, Ni Ji
Machine Learning · Cross-listed from stat.ML
Coded Hankel Polynomial Chaos: Spectral Identification of Dominant Polynomial-Chaos Modes
Zhiliang Deng and Xiaomei Yang
Identification of dominant
polynomial-chaos modes is usually formulated as a sparse-regression problem on a sampled multivariate
polynomial dictionary. We develop coded Hankel
polynomial chaos (CH-PC), a complementary spectral formulation for dominant-mode identification. A finite generating transform converts PCE coefficients into a coefficient-generating
polynomial, and evaluation along a
geometric phase orbit produces a finite exponential sum. Its model order and spectral nodes are encoded by low-rank Hankel
matrices, while coordinate phase shifts attach root-of-unity labels from which the full
polynomial multi-indices are recovered. Coordinate-shifted probes are combined as common-node snapshots, and independent phase encodings provide redundant representations when a single spectral encoding is poorly conditioned. For finite observations, population, finite-data, and observed probes are kept distinct: sampling or quadrature error and observation error enter as separate Hankel perturbations, which are then connected to spectral stability, discrete decoding, and phase voting. For tensor-product candidate sets, the generating kernel factorizes into one-dimensional sums and can be evaluated without assembling the full multivariate PCE design
matrix. Numerical experiments on sparse Legendre
benchmarks and a
stochastic Darcy problem illustrate exact recovery, noise stabilization, unknown-order identification by phase persistence, and dominant-mode recovery for a PDE-generated quantity of interest.
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Machine Learning · Cross-listed from cs.CV
TokenSTFormer: A Tokenized Spatial-temporal Attention Model for Holistic Motion Analysis in Adolescent Idiopathic Scoliosis Screening
Dong Chen and Kenneth M.C. Cheung
Adolescent Idiopathic Scoliosis (AIS) is a prevalent spinal deformity in adolescents that, if left untreated, can result in severe health outcomes. Traditional screening methods are limited by subjective interpretation, reliance on professional expertise and low scalability. To address these challenges, we present ScoliGait
dataset, which comprises 1,516 gait
video clips paired with corresponding X-ray records. We also introduce TokenSTFormer, a novel model that tokenizes spatial and temporal semantics to enhance feature representation and convergence. Our model achieves state-of-the-art performance, surpassing vanilla
Vision Transformer encoder across key metrics, including accuracy of 0.79. This study highlights the potential of leveraging holistic motion features derived from gait
video and
attention-based models for scalable, cost-effective AIS screening, paving the way for future clinical applications in scoliosis detection.
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Machine Learning
RetroMPA: A Molecular Property-Aware Auxiliary Framework for Enhancing Retrosynthesis Prediction
Mianzhi Liu, Fan Xiao, Zhiliang Yu et al. (+5 more)
Retrosynthesis is a cornerstone of drug discovery and organic synthesis. While data-driven deep learning models have shown remarkable progress, they autonomously learn reaction patterns from extensive
datasets with limited integration of established chemical knowledge as priors. To address this limitation, we introduce RetroMPA, a molecular property-aware, post-hoc enhancement module that injects chemical knowledge into the retrosynthesis pipeline. Rather than functioning as an independent SMILES sequence generator, RetroMPA is a broadly applicable, model-agnostic chemical filter designed to recalibrate and optimize the predictive pathways of existing
algorithms. This plug-and-play framework integrates seamlessly with a range of data-driven retrosynthesis methods, enhancing outputs without modifying model architecture or requiring resource-intensive retraining. By leveraging a property-aware latent
embedding space, RetroMPA consistently improves top-1 accuracy across eight representative retrosynthesis models by an average of 5.50% on USPTO-50K. Furthermore, we validate its scalability on the large-scale USPTO-Full
dataset, achieving an average improvement of about 2.03% across both template-based and template-free architectures. Wet-lab experiments provide preliminary support for the practical utility of the framework. These syntheses confirmed viable, previously unreported substrate combinations for classic reaction paradigms—specifically, Suzuki-Miyaura coupling, Bucherer reaction, and Friedel-Crafts acylation—suggesting that RetroMPA can operate beyond mere data fitting. The code is open-sourced at https://github.com/MengzhouLu/RetroMPA.
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All authors Mianzhi Liu, Fan Xiao, Zhiliang Yu, Huayang Huang, Yuke Li, Yi Yang, Wenbo Liu, Yu Wu
Machine Learning · Cross-listed from stat.ML
EMS Coreset: An Efficient Expectation-Maximization Algorithm for Sinkhorn Coreset
Haoyun Yin, Chuanhui Liu and Xiao Wang
Coresets distill large
datasets into small, representative subsets for efficient downstream learning. Yet Optimal Transport (OT)-based selection typically requires intensive computation of transport plans, limiting scalability. We introduce a scalable Sinkhorn coreset method that permits closed-form updates of the entropically regularized OT coupling by allowing non-uniform coreset weights. This produces centroids that generalize k-means via soft assignments. We establish asymptotic consistency of the selected measure and Lipschitz stability to data perturbations, providing accuracy and robustness guarantees. Across synthetic and real-world
benchmarks, the proposed method achieves competitive or improved approximation quality while substantially reducing runtime compared to Wasserstein- and standard Sinkhorn-based coreset selection, especially at large scale.
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Machine Learning
AsyTO: Asymmetric Temporal Operator for Parameter-Efficient Multivariate Time Series Forecasting
Xiachong Lin, Du Yin, Hao Xue et al. (+5 more)
Multivariate time-series
forecasting faces a structural dilemma: sharing one temporal predictor across variables is parameter-efficient but forces heterogeneous variables through an identical history-to-future map, whereas learning an independent predictor per variable restores flexibility at a cost that grows with the product of variable count, context length, and horizon. We argue that this dilemma dissolves once the object being compressed is the
forecasting operator rather than the observed series.
Auditing per-variable linear history-to-future maps across standard
benchmarks, we find that a phase-locked seasonal component paired with a compact residual operator outperforms a dense phase-blind reference in most audited settings. The residual transport is also directional: lag-invariant alternatives consistently underperform asymmetric history-to-future maps. Guided by this structure, we propose AsyTO, an Asymmetric Temporal Operator that factorizes the tensor of per-variable operators into shared but distinct history-reading and future-writing temporal modes with per-variable mode-wise gains, complemented by a low-rank periodic prototype and a cycle-separable factorization of the temporal modes. Each forecast reads only its own variable's history, so parameters and compute grow linearly in the number of variables. Across eleven
benchmarks and multiple forecast horizons, AsyTO attains the best lightweight error in 30 of 44
dataset-horizon settings, locating at the accuracy-compute Pareto frontier.
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All authors Xiachong Lin, Du Yin, Hao Xue, Wen Hu, Imran Razzak, Arian Prabowo, Matthew Amos, Flora D. Salim
Machine Learning
Unifying Graph Neural Networks Through a Common Layer Equation
Sai Karthik Navuluru, Siddhartha Shankar Das, Bo Ni et al. (+9 more)
Graph neural networks are commonly described through family-specific equations whose notation obscures shared computations and structural differences. We introduce a common layer equation that represents covered architectures through seven components: an update domain, channel set, propagation bank, per-channel message maps, channel-fusion operator, ego/residual map, and update map. The central factorization separates where information moves, encoded by the propagation bank, from what moves, encoded by the message maps. Function-valued fillings extend the same equation across local message passing,
attention, spectral filtering, global communication, relation-specific channels, higher-order domains, and
geometric messages. We make this unification explicit and checkable through worked reductions of canonical layers and component assignments spanning seven nonexclusive architectural families. A fixed slot discipline assigns operations by computational role and defines the framework's coverage boundary. The decomposition also yields component-level theoretical insights: under endpoint-local messages and node-local updates, operator support bounds one-layer dependencies, and one-layer global mixing requires a full effective operator row under the stated hypotheses. The resulting framework organizes more than 200 architectures in a common design space, enables component-wise comparison and generation of structurally consistent architectures, and connects propagation choices to oversmoothing, oversquashing, heterophily, and expressivity. It further exposes the empirical inverse problem of mapping measurable graph and task properties to validated component choices.
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All authors Sai Karthik Navuluru, Siddhartha Shankar Das, Bo Ni, Hongjie Chen, Yu Wang, Baris Coskunuzer, Nesreen K. Ahmed, Franck Dernoncourt, Mahantesh Halappanavar, Tyler Derr, Ryan A. Rossi, Lakshman Tamil
Machine Learning · Cross-listed from cs.AI
Protein Structure Prediction: From Evolutionary Constraints to Generative Modeling
Wengan He, Yongsheng Luo, Lihong Jiang et al. (+2 more)
Accurate
protein structure prediction is fundamental to structural biology because
protein structure underlies molecular function and provides a basis for mechanistic interpretation. Recent advances in deep learning have transformed the field from multiple sequence
alignment (MSA)-driven monomer folding into broader frameworks capable of modeling
protein complexes and increasingly heterogeneous molecular systems. Existing reviews have summarized this progress from the perspectives of representative models, application domains, and
protein design. Building on these efforts, this review focuses on the methodological
evolution of the field itself. It examines recent developments through three closely related dimensions: representations and data, architectures and learning strategies, and confidence and evaluation. Within this perspective, the field is organized into four methodological phases and three cross-cutting transitions: from explicit evolutionary coupling features and early contact prediction to learned sequence representations in AlphaFold2, RoseTTAFold, and ESMFold; from
protein-only monomer folding to increasingly integrated modeling of heterogeneous molecular systems in AlphaFold-Multimer, RoseTTAFoldNA, and AlphaFold3; and, more recently, from prediction-oriented structure inference to design-oriented generative modeling in RFdiffusion and related frameworks. This framework provides a clearer understanding of how methodological shifts have shaped the capabilities, limitations, and practical roles of recent models.
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All authors Wengan He, Yongsheng Luo, Lihong Jiang, Wenhui Xu, Yu Li
Machine Learning · Cross-listed from cs.CV
Representation Is Not Enough: Body-Localized Thermal Evidence for Contactless Stress and Craving Sensing in Opioid Use Disorder
Sachin Deb, Harshit Sharma and Asif Salekin
Removing wearables from physiological monitoring also removes their supervision: the signal indicating where and when a stress response occurred. Contactless stress sensing therefore becomes a weakly supervised evidence-localization problem, where a clip-level label must be traced to the body regions and moments that produced it. We address this with FABLE-Therm, a weakly supervised architecture that preserves localized evidence across body regions, time, and encoder-specific representations until the final decision. FABLE-Therm fuses frozen foundation-model encoders at the
embedding level, with theory explaining why localized fusion can outperform feature concatenation and prediction averaging. We study this problem in opioid use disorder (OUD), where stress is a major relapse trigger and sustained wearable use can be difficult during early recovery. Using fixed thermal
video, FABLE-Therm achieves 0.938 AUROC on held-out participants, and its learned representation transfers to self-reported craving, providing, to our knowledge, the first evidence that craving can be recovered from contactless thermal
video. Localized evidence also enables participant-level analysis of deployment failure. We find that improving representation alone is insufficient for equitable deployment: additional data from the underserved group would recover only about half of the cohort gap, while the remainder reflects person-to-person heterogeneity. This modality-agnostic decomposition applies to models with identifiable subpopulations. Together with the first cohort-structured contactless thermal OUD
benchmark, our results show that preserving localized evidence supports both accurate sensing and principled analysis of who a model fails and why.
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