$PROT protein

Latest papers

1. Ayurvedic Rasayana Restores Lipid Homeostasis in Liver: Insights from Systems Biology Studies q-bio.MN · 10 Nov · 1 hit

   …T2D, fatty liver disease and obesity. An integrated knowledge graph linking formulations, phytochemicals, protein targets, FDA-approved drugs and disease genes enabling systems-level exploration of these…

2. ProTEUS: A mutation-resolved world model for closed-loop protein evolution q-bio.BM · 09 Nov · 5 hits

   Protein engineering requires navigating rugged fitness landscapes, where small sequence changes can produce…

3. Geometry and Stochastic Analysis of Flow and Diffusion Models: A Survey math.PR · 09 Nov · 1 hit

   …means of learning and sampling high-dimensional probability distributions, from images and video to proteins, molecules and physical fields, and increasingly language. Each carries a simple law to the law of…

4. HyPLM Technical Report cs.LG · 09 Nov · 3 hits

   Protein language models (PLMs) are standard tools for variant-effect prediction, protein annotation and…

5. HyInv Technical Report cs.LG · 09 Nov · 1 hit

   Inverse folding designs amino-acid sequences for a given protein backbone, and screening needs many candidates that are both diverse and well folded. We present…

6. OriDynamics: Towards a World Model for Biomolecular Dynamics q-bio.BM · 09 Nov · 3 hits

   …molecules. Here we present OriDynamics, a unified framework for all-atom ensemble generation across protein monomers and complexes with small molecules or protein partners. OriDynamics introduces a latent…

7. scBIG++: Learning Across Genes and Cells to Predict Single-Cell Perturbation Responses cs.LG · 08 Nov · 1 hit

   …condition response generation. Generated states are decoded into expression profiles covering all assayed protein-coding genes retained after preprocessing, supporting comprehensive analysis of perturbation-induced…

8. TALK: One-Shot Batch Design for Protein Variant Effect Prediction cs.CE · 08 Nov · 5 hits

   Protein variant effect prediction is central to understanding protein function and guiding protein…