Machine Learning
Beyond Mode-Seeking RL: Trajectory-Balance Post-Training for Diffusion Language Models
Saba Ahmadi, Prasanna Parthasarathi and Yufei Cui
Diffusion language models are a promising alternative to autoregressive models, yet post-training methods for them largely adapt reward-maximizing objectives. We identify a central failure mode in this setting we call trajectory locking: sampled reward-driven updates over-concentrate probability mass onto a narrow set of denoising paths, reducing coverage of alternative correct solutions under repeated sampling. To address this, we propose TraFL (Trajectory Flow baLancing), a trajectory-balance objective that trains the policy toward a reward-tilted target distribution anchored to a frozen reference model. We make this practical for
diffusion language models with a
diffusion-compatible sequence-level surrogate and a learned
prompt-dependent normalization. Across mathematical
reasoning and code generation
benchmarks, TraFL is the only evaluated post-training method that improves over the base model in every
benchmark-length setting, with gains that persist as the sampling budget increases. The improvements transfer to held-out evaluations: TraFL stays above the base model on Minerva Math and is the strongest method on every LiveCodeBench difficulty split.
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Machine Learning
Unsupervised learning of acquisition variability in structural connectomes via hybrid latent space modeling
Gaurav Rudravaram, Lianrui Zuo, Karthik Ramadass et al. (+17 more)
Acquisition differences across sites, scanners, and protocols in dMRI introduce variability that complicates structural connectome analysis. This motivates deep learning models that can represent high-dimensional connectomes in a low-dimensional space while explicitly separating acquisition-related effects from biological variation. Conventional dimensionality reduction methods model all variance as continuous, so acquisition effects often get absorbed into a continuous latent space. Recent hybrid latent-space models combine discrete and continuous components to address this, but typically require manual capacity tuning to ensure the discrete component captures the intended variability. We introduce an unsupervised framework that removes this manual tuning by architecturally annealing encoder outputs before decoding, allowing the model to adaptively balance discrete and continuous latent variables during training. To evaluate it, we curated a
dataset of N=7,416 structural connectomes derived from dMRI, spanning ages 2 to 102 and 13 studies with 25 unique acquisition-parameter combinations. Of these, 5,900 are cognitively unimpaired, 877 have mild cognitive impairment (MCI), and 639 have Alzheimer's disease (AD). We compare against a standard VAE, PCA with k-means clustering, and hybrid models that anneal only through the loss function. Our architectural annealing produces stronger site learning (ARI=0.53, p<0.05) than these baselines. Results show that a hybrid continuous-discrete latent space, with architectural rather than loss-based annealing, provides a useful unsupervised mechanism for capturing acquisition variability in dMRI: by jointly modeling smooth and categorical structure, the Joint-VAE recovers clusters aligned with scanner and protocol differences.
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All authors Gaurav Rudravaram, Lianrui Zuo, Karthik Ramadass, Elyssa McMaster, Jongyeon Yoon, Aravind R. Krishnan, Adam M. Saunders, Chenyu Gao, Nancy R. Newlin, Praitayini Kanakaraj, Lori L. Beason Held, Murat Bilgel, Laura A. Barquero, Micah DArchangel, Tin Q. Nguyen, Laurie B. Cutting, Derek Archer, Timothy J. Hohman, Daniel C. Moyer, Bennett A. Landman
Machine Learning
Learning to Select Source Domains: Proxy-Rewarded Policy Optimization for Molecular OOD Generalization
Zhuohao Lin, Kun Li, Jiameng Chen et al. (+4 more)
Molecular property prediction under severe out-of-distribution (OOD) shifts remains challenging because conventional scaffold splits can retain local structural similarity between training and test molecules, while adaptation from heterogeneous source domains may cause negative transfer. We introduce SCOPE-Bench, a scaffold-cluster
benchmark constructed by partitioning Bemis-Murcko scaffolds in an explicit physicochemical descriptor space, and POMA, a retrieve-compose-adapt framework for source-domain selection when target property labels are unavailable. POMA uses unlabeled target structures to retrieve labeled source scaffolds as proxy targets. A policy is trained from reductions in proxy-task mean absolute error after adaptation, and the selected source subset is then used for target adaptation with covariance
alignment at the whole-molecule and BRICS-derived substructure levels. We evaluate HOMO, LUMO, and HOMO-LUMO gap prediction on QM9 using three 3D molecular backbones and 15 target-scaffold tasks. Relative to conventional scaffold splitting, prediction errors on SCOPE-Bench increase by up to 8.0-fold, with a mean increase of 5.9-fold. Relative to the supervised baseline under the strict OOD split, POMA reduces mean absolute error by up to 11.2%, with an average relative reduction of 6.2% over the nine backbone-property combinations. These results support adaptive source selection as a useful strategy for molecular prediction under strong structural distribution shifts.
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All authors Zhuohao Lin, Kun Li, Jiameng Chen, Jiajun Yu, Duanhua Cao, Yizhen Zheng, Wenbin Hu
Machine Learning
Mechanistic Interpretability of EEG Foundation Models via Sparse Autoencoders
William Lehn-Schiøler, Magnus Ruud Kjær, Rahul Thapa et al. (+10 more)
EEG foundation models achieve state-of-the-art clinical performance, yet the internal computations driving their predictions remain opaque: a barrier to clinical trust. We apply TopK Sparse Autoencoders (SAEs) across three architecturally distinct
EEG transformers: SleepFM, REVE, and LaBraM to extract sparse feature dictionaries from their
embeddings. By grounding these features in a clinical taxonomy (abnormality, age, sex, and medication), we
benchmark monosemanticity and
entanglement across architectures. A single hyperparameter procedure, driven by an intrinsic dictionary health audit, transfers robustly across all three architectures. Via concept steering, we introduce a "target vs. off-target" probe area metric to quantify steering selectivity and reveal three operational regimes: selectively steerable, encoded but entangled, and non-encoded. This framework exposes critical representational failures: "wrecking-ball" interventions that collapse global model performance, and clinical entanglements, such as age-pathology confounding, where it is impossible to suppress one concept without corrupting the other. Finally, a spectral decoder maps these interventions back to the amplitude spectrum, translating latent manipulations into physiologically interpretable frequency signatures, such as pathological slow-wave suppression and $\alpha$-band restoration.
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All authors William Lehn-Schiøler, Magnus Ruud Kjær, Rahul Thapa, Magnus Guldberg Pedersen, Anton Mosquera Storgaard, Nick Williams, Radu Gatej, Tue Lehn-Schiøler, Andreas Brink-Kjær, Sadasivan Puthusserypady, Sándor Beniczky, James Zou, Lars Kai Hansen
Machine Learning
Vision-Based Runtime Monitoring under Varying Specifications using Semantic Latent Representations
Bardh Hoxha, Oliver Schön, Hideki Okamoto et al. (+2 more)
We study certified runtime monitoring of past-time signal temporal logic (ptSTL) from visual observations under partial observability. The monitor must infer safety-relevant quantities from images and provide finite-sample guarantees, while being reusable: once trained and calibrated, it should certify any formula in a target fragment without per-formula retraining. For fragments induced by a finite dictionary of temporal atoms, we prove that the semantic basis, the vector of atom robustness scores, is the minimum prediction target within the class of monotone, 1-Lipschitz reusable interfaces: any formula is evaluated by a deterministic decoder derived from the parse tree, and a single conformal calibration pass certifies the entire fragment with no union bound. We also introduce a rolling prediction monitor that predicts only current predicate values and reconstructs temporal history online; this is easier to learn but grows conservative at long horizons. On a pedestrian-crossroad
benchmark, rolling achieves tighter certified bounds at short horizons while the semantic-basis monitor is up to 4-times tighter at long horizons. We validate the presented monitors on real-world Waymo driving data, where both monitors satisfy the conformal coverage guarantee empirically.
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All authors Bardh Hoxha, Oliver Schön, Hideki Okamoto, Lars Lindemann, Georgios Fainekos
Machine Learning · Cross-listed from cs.CR
XAI and Statistical Analysis for Reliable Intrusion Detection in the UAVIDS-2025 Dataset: From Tree to Hybrid and Tabular DNN Ensembles
Iakovos-Christos Zarkadis and Christos Douligeris
During thDuring the last few years, the term Mechanistic Interpretability, a specific area, under the umbrella of explainable artificial intelligence (XAI), has been introduced, to explain the decisions made by complex machine learning (ML) models in critical systems like
UAV intrusion detection systems (UAVIDS). In this paper, we apply best-practices for data pre-processing and examine a wide range of tree-ensembles, deep neural networks, hybrid stacking models and the latest ensemble neural networks to detect intrusions in
UAV, with stratified 10-fold cross validation. With our top-performing model, XGBoost, we proceed to Shapley Additive explanations (SHAP), to analyze the global and local feature importances and understand which features, each attack targets, to mimic normal traffic and where the misclassifications occur. Furthermore a distribution analysis follows, by visually comparing violin plots and the curves of kernel density estimations. With the Westfall-Young permutation test for multiple comparisons, the Bandwidth optimization of the KDEs and the selection of Jensen-Shannon Distance for the test, we discover the true causes of false predictions, observed in Wormhole and Blackhole attacks in UAVIDS-2025. The findings provide robust, reliable and explainable models for
UAV intrusion detection, along with statistical insights, which capture and clarify the masked nature of the attacks, regarding the challenge of Density Support Intersection, between these attacks, in this
dataset.
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Machine Learning · Cross-listed from cs.CL
Merging Methods for Multilingual Knowledge Editing for Large Language Models: An Empirical Odyssey
Kunil Lee, Ki-Young Shin, Jong-Hyeok Lee et al. (+1 more)
Multilingual knowledge editing (MKE) remains challenging because
language-specific edits interfere with one another, even when locate-then-edit methods work well in monolingual settings. This paper focuses on three issues: the effectiveness of vector merging methods for MKE, the extent to which Task Singular Vectors for Merging (TSVM) can reduce
multilingual interference, and the influence of the weight scaling factor and rank compression ratio on performance. We evaluate six merging variants with two popular backbone large
language models, two base knowledge editing methods, and 12
languages on the MzsRE
benchmark under a large-scale batch-editing setting. Our results show that vector summation with shared covariance is the most reliable overall strategy, whereas simple summation without shared covariance performs poorly. TSVM improves performance in some settings, but its ability to mitigate
multilingual interference is limited. We also find that performance is sensitive to both weight scale and rank ratio, with larger-than-default scaling and relatively low rank often yielding better results. These findings clarify the practical strengths and limits of current vector merging methods for MKE and provide guidance for future
multilingual knowledge editing research.
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All authors Kunil Lee, Ki-Young Shin, Jong-Hyeok Lee, Young-Joo Suh
Machine Learning · Cross-listed from cs.SE
CA2: Code-Aware Agent for Automated Game Testing
Valliappan Chidambaram Adaikkappan, Vincent Martineau, Joshua Romoff et al. (+1 more)
Automated game testing is important for verifying game functionality, but it remains a costly and time-consuming process. Manual testing often misses edge cases, and current automated methods struggle to provide full code coverage. Prior work has explored reinforcement learning (RL) for game testing, but without leveraging internal code signals such as the call stack. We present Code Aware
Agent (CA2), which uses call stack information to learn effective testing strategies. The
agent receives the current function call trace along with the game state and learns to reach specific target functions. We instrument two types of environments, 1) State-based and 2) Image-based, with support for efficient call stack extraction. Through experimental evaluation, we find that CA2 achieves consistent improvement over the non-code aware baselines, which does not leverage call stack information. Our results show that incorporating code signals like the call stack enables more effective and targeted game testing.
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All authors Valliappan Chidambaram Adaikkappan, Vincent Martineau, Joshua Romoff, David Meger
Machine Learning · Cross-listed from stat.ML
A Regret Perspective on Online Multiple Testing
Qingyang Hao, Kongchang Zhou, Fang Kong et al. (+1 more)
Online Multiple Testing (OMT), a fundamental pillar of sequential statistical inference, traditionally evaluates the False Discovery Rate (FDR) and statistical power in isolation, obscuring the highly asymmetric costs of false positives and false negatives in modern automated pipelines. To unify this evaluation, we introduce $\textit{Weighted Regret}$. Under this metric, we prove the $\textit{Duality of Regret Conservation}$: purely deterministic procedures ensuring strict FDR control inevitably incur an $\Omega(T)$ linear regret penalty, as threshold depletion during signal-sparse cold starts forces massive false negatives. Tailored for exogenous testing streams, we propose Decoupled-OMT (DOMT) as a baseline-agnostic meta-wrapper. By incorporating a history-decoupled, strictly non-negative random perturbation, DOMT rescues purely deterministic baselines from severe threshold depletion. Crucially, it preserves exact asymptotic safety in stationary environments and rigorously bounds finite-sample error inflation during cold-starts. Guaranteeing zero additional false negatives, it yields an order-optimal $\Omega(\sqrt{T})$ regret reduction in bursty environments, with a derived “Cold-Start Tax” characterizing the exact phase transition of algorithmic superiority. Experiments validate that DOMT consistently curtails empirical weighted regret, achieving an order-optimal sublinear mitigation of threshold depletion to navigate the non-stationary Pareto frontier.
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All authors Qingyang Hao, Kongchang Zhou, Fang Kong, Hongxin Wei
Machine Learning · Cross-listed from stat.ML
Multi-Scale Dequant: Eliminating Dequantization Bottleneck via Activation Decomposition for Efficient LLM Inference
Lingchao Zheng, Yuwei Fan, Jun Li et al. (+5 more)
Quantization is essential for efficient large
language model (LLM) inference, yet the dequantization step-converting low-bit weights back to high-precision for
matrix multiplication has become a critical bottleneck on modern AI accelerators. On architectures with decoupled compute units (e.g., Ascend NPUs), dequantization operations can consume more cycles than the
matrix multiplication itself, leaving the high-throughput tensor cores underutilized. This paper presents Multi-Scale Dequant (MSD), a quantization framework that removes weight/KV dequantization from the GEMM critical path. Instead of lifting low-bit weights to BF16 precision, MSD decomposes high-precision BF16 activations into multiple low-precision components, each of which can be multiplied directly with quantized weights via native hardware-accelerated GEMM. This approach shifts the computational paradigm from precision conversion to multi-scale approximation, avoiding INT8-to-BF16 weight conversion before GEMM. We instantiate MSD for two weight formats and derive tight error bounds for each. For INT8 weights (W4A16), two-pass INT8 decomposition achieves near 16 effective bits. For MXFP4 weights (W4A16), two-pass MXFP4 decomposition yields near 6.6 effective bits with error bound 1/64 per block surpassing single-pass MXFP8(5.24 bits) while maintaining the same effective GEMM compute time. We further derive closed-form latency and HBM traffic models showing that MSD avoids the Vector-Cube pipeline stall caused by dequantization and reduces KV cache HBM traffic by up to 2.5 times in
attention. Numerical simulations on
matrix multiplication and Flash
Attention kernels confirm that MSD does not degrade accuracy compared to dequantization baselines, and in many settings achieves lower L2 error.
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All authors Lingchao Zheng, Yuwei Fan, Jun Li, Chengqiu Hu, Qichen Liao, Junyi Fan, Rui Shi, Fangzheng Miao
Machine Learning · Cross-listed from stat.ML
A Survey on Data-Dependent Worst-Case Generalization Bounds
Hubert Leroux, Jean Marcus and Julien Roger
Deep neural networks generalize well despite being heavily overparameterized, in apparent contradiction with classical learning theory based on uniform convergence over fixed hypothesis spaces. Uniform bounds over the entire parameter space are vacuous in this regime, and recent work has shown that non-vacuous guarantees can be recovered by restricting
attention to the part of parameter space that the
algorithm actually visits. This survey paper organizes this line of work around three steps: extending PAC-
Bayesian theory to random, data-dependent hypothesis sets (arXiv:2404.17442); refining the complexity term with
geometric and topological descriptors of the optimization trajectory, including fractal dimensions, alpha-weighted lifetime sums, and positive magnitude (arXiv:2006.09313, arXiv:2302.02766, arXiv:2407.08723); and replacing the resulting information-theoretic terms by stability assumptions (arXiv:2507.06775). We unify these contributions around a single template inequality and a head-to-head comparison of the resulting bounds.
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Machine Learning · Cross-listed from stat.ML
Covariance-aware sampling for Diffusion Models
Andrea Schioppa and Tim Salimans
We present a covariance-aware sampler that improves the quality of pixel-space
Diffusion Model (DM) sampling in the few-step regime. We hypothesize that in the few-step regime samplers fail because they rely solely on the predicted mean of the reverse distribution, while our solution explicitly models the reverse-process covariance. Our method combines Tweedie's formula to estimate the covariance with an efficient, structured
Fourier-space decomposition of the covariance
matrix. Implemented as an extension of DDIM, our method requires only a minimal overhead: one extra Jacobian-Vector Product (JVP) per step. We demonstrate that for pixel-based DMs, our method consistently produces superior samples compared to state-of-the-art second order samplers (Heun, DPM-Solver++) and the recent aDDIM sampler, at an identical number of function evaluations (NFE).
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Machine Learning · Cross-listed from stat.ML
AIS: Adaptive Importance Sampling for Quantized RL
Jiajun Zhou, Wei Shao, Lingchao Zheng et al. (+2 more)
Reinforcement learning (RL) for large
language models (LLMs) is dominated by the cost of rollout generation, which has motivated the use of low-precision rollouts (e.g., FP8) paired with a BF16 trainer to improve throughput and reduce
memory pressure. This introduces a rollout-training mismatch that biases the policy gradient and can cause training to collapse outright on
reasoning benchmarks. We show that the mismatch is non-stationary and acts as a double-edged sword: early in training it provides a
stochastic exploration bonus, exposing the gradient to trajectories the trainer would otherwise under-sample, but the same perturbation transitions into a destabilizing source of bias as the policy concentrates. To solve this, we propose Adaptive Importance Sampling (AIS), a correction framework that adjusts the strength of its intervention on a per-batch basis. AIS combines three real-time diagnostics, namely weight reliability, divergence severity, and variance amplification, into a single mixing coefficient that interpolates between the uncorrected and fully importance-weighted gradients, suppressing the destabilizing component of the mismatch while preserving its exploratory benefit. We integrate AIS into GRPO and evaluate it on the
diffusion-based LLaDA-8B-Instruct and the autoregressive Qwen3-8B and Qwen3.5-9B across mathematical
reasoning and planning
benchmarks. AIS matches the BF16 baseline on most tasks while retaining the 1.5 to 2.76x rollout speedup of FP8.
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All authors Jiajun Zhou, Wei Shao, Lingchao Zheng, Yuwei Fan, Ngai Wong
Machine Learning · Cross-listed from q-bio.NC
Feature Visualization Recovers Known Cortical Selectivity from TRIBE v2
Stuart Bladon and Brinnae Bent
Brain encoder models predict cortical fMRI responses from the internal activations of pretrained
vision and
language networks, and are typically evaluated by held-out prediction accuracy. This is a useful signal for training but a poor one for interpretation: it tells us an encoder fits the data without telling us whether it has internalized the functional organization of the
brain. We propose feature visualization – gradient ascent on the encoder's predicted activation for a target region of interest (ROI) – as a complementary interpretability technique, and apply it to TRIBE v2 composed with V-JEPA 2 (ViT-G, 40 layers), holding both frozen and synthesizing still images for seven regions spanning the ventral and dorsal visual hierarchies. Under identical hyperparameters, the probe recovers a visible progression of increasing spatial scale and feature complexity across V1 to V4, matching the ventral-stream hierarchy. It also produces three distinctive downstream regimes: radial "frozen-motion" streaks for the middle temporal area (MT) despite static-only optimization, face-like features for the fusiform face area (FFA), and consistent rectilinear line patterns for the parahippocampal place area (PPA). Optimized FFA stimuli drive the predicted region ~4x as much as a natural face photograph, consistent with feature visualization producing
adversarial super-stimuli rather than canonical exemplars. The probe is simple, differentiable, and applicable to any
brain encoder with a differentiable backbone, allowing for qualitative evaluation of
brain encoders.
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Machine Learning · Cross-listed from cs.LO
Quantitative Linear Logic for Neuro-Symbolic Learning and Verification
Thomas Flinkow, Ekaterina Komendantskaya, Matteo Capucci et al. (+1 more)
Differentiable Logics are deployed in neuro-symbolic learning tasks as a way of
embedding logical constraints in the training objective of neural networks. A differentiable logic consists of a syntax to write logical properties and a semantics to interpret them as real-valued functions to be folded in the loss function. A defining trade-off of the field is that between logical properties of the connectives, and analytic concerns for the semantics, with both aspects being relevant in applications. At one extreme we find fuzzy logics, that have well-established algebraic and proof-theoretic foundations, and at the other ad-hoc differentiable logics like Fischer's DL2, conceived for deep learning applications. However, no satisfactory foundation has emerged yet. We propose a resolution to this long-standing tension via a novel logic, Quantitative Linear Logic (QLL), with foundational ambitions. Our design is driven by naturality – the idea that, since logical constraints are translated to losses, the semantics of the connectives should be pertinent operations used in ML practice (that is, sum and log-sum-exp) on additive quantities (like logits). We then judge the result on two aspects: logical adequacy – that they satisfy most of the standard logical laws of Linear Logic; and empirical effectiveness – test-time performance (as measured by
adversarial attacks) is well-correlated to the actual verification of the logical constraints (as measured by off-the-shelf neural network verifiers), which makes QLL stand out among SoTA techniques.
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All authors Thomas Flinkow, Ekaterina Komendantskaya, Matteo Capucci, Rosemary Monahan
Machine Learning · Cross-listed from cs.SD
EVA-Bench: A New End-to-end Framework for Evaluating Voice Agents
Tara Bogavelli, Gabrielle Gauthier Melançon, Katrina Stankiewicz et al. (+10 more)
Voice
agents are increasingly deployed across enterprise applications. However, no existing
benchmark jointly addresses realistic conversation simulation and comprehensive voice-specific evaluation. We present EVA-Bench, an end-to-end evaluation framework that addresses both. On the simulation side, EVA-Bench orchestrates dynamic bot-to-bot audio conversations with automatic simulation validation that detects user simulator error and appropriately regenerates conversations before scoring. On the measurement side, EVA-Bench introduces two composite metrics: EVA-A (Accuracy) and EVA-X (Experience). EVA-Bench includes 213 scenarios across three enterprise domains, a controlled perturbation suite for accent and noise robustness, and multi-trial measurements that distinguish peak from reliable capability. Across 12 systems spanning all three architectures, we find: (1) no system simultaneously exceeds 0.5 on both EVA-A pass@1 and EVA-X pass@1; (2) peak and reliable performance diverge substantially (median pass@k–pass^k gap of 0.44 on EVA-A); and (3) accent and noise perturbations expose substantial robustness gaps, with effects varying across architectures, systems, and metrics (mean $\Delta$ up to 0.314). We release EVA-Bench under an open-source license.
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All authors Tara Bogavelli, Gabrielle Gauthier Melançon, Katrina Stankiewicz, Oluwanifemi Bamgbose, Fanny Riols, Hoang H. Nguyen, Raghav Mehndiratta, Lindsay Devon Brin, Joseph Marinier, Hari Subramani, Anil Madamala, Sridhar Krishna Nemala, Srinivas Sunkara
Machine Learning · Cross-listed from stat.ML
What is Learnable in Valiant's Theory of the Learnable?
Steve Hanneke, Anay Mehrotra, Grigoris Velegkas et al. (+1 more)
Valiant's 1984 paper is widely credited with introducing the PAC learning model, but it, in fact, introduced a different model: unlike PAC learning, the learner receives only positives, may issue membership queries, and must output a hypothesis with no false positives. Prior work characterized variants, including the case without queries. We revisit Valiant's original model and ask: *Which classes are learnable in it?* For every finite domain, including Valiant's Boolean-hypercube setting, we show that a class is learnable if and only if every realizable positive sample can be certified by a poly-size adaptive query-compression scheme. This is a new variant of sample compression where the learner certifies samples via a short interaction with the membership oracle. Our characterization shows that learnability in Valiant's model is strictly sandwiched between learnability in the PAC model and the variant of Valiant's model without membership queries. This is one of the rare cases where introducing membership queries changes the set of learnable classes, and not just the sample or computational complexity. Next, we study the natural extension of the model to arbitrary domains. While we do not obtain an exact characterization, our techniques readily generalize and show that the same strict sandwiching persists. Finally, we show that $d$-dimensional halfspaces, which are not learnable without queries, are learnable with queries: we give a $\mathrm{poly}(d) \tilde{O}(1/\epsilon)$ sample and $\mathrm{poly}(d) \mathrm{polylog}(1/\epsilon)$ query
algorithm, and prove that at least $\Omega(d)$ samples or queries are necessary. To our knowledge, this is the first
algorithm for halfspaces in Valiant's model. Together, these results uncover a surprisingly rich theory behind Valiant's original notion of learnability and introduce ideas that may be of independent interest in learning theory.
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All authors Steve Hanneke, Anay Mehrotra, Grigoris Velegkas, Manolis Zampetakis
Machine Learning · Cross-listed from cs.CV
R-DMesh: Video-Guided 3D Animation via Rectified Dynamic Mesh Flow
Zijie Wu, Lixin Xu, Puhua Jiang et al. (+3 more)
Video-guided 3D animation holds immense potential for content creation, offering intuitive and precise control over dynamic assets. However, practical deployment faces a critical yet frequently overlooked hurdle: the pose misalignment dilemma. In real-world scenarios, the initial pose of a user-provided static mesh rarely aligns with the starting frame of a reference
video. Naively forcing a mesh to follow a mismatched trajectory inevitably leads to severe
geometric distortion or animation failure. To address this, we present Rectified Dynamic Mesh (R-DMesh), a unified framework designed to generate high-fidelity 4D meshes that are “rectified” to align with
video context. Unlike standard motion transfer approaches, our method introduces a novel VAE that explicitly disentangles the input into a conditional base mesh, relative motion trajectories, and a crucial rectification jump offset. This offset is learned to automatically transform the arbitrary pose of the input mesh to match the
video's initial state before animation begins. We process these components via a Triflow
Attention mechanism, which leverages vertex-wise
geometric features to modulate the three orthogonal flows, ensuring physical consistency and local
rigidity during the rectification and animation process. For generation, we employ a Rectified Flow-based
Diffusion Transformer conditioned on pre-trained
video latents, effectively transferring rich spatio-temporal priors to the 3D domain. To support this task, we construct
Video-RDMesh, a large-scale
dataset of over 500k dynamic mesh sequences specifically curated to simulate pose misalignment. Extensive experiments demonstrate that R-DMesh not only solves the
alignment problem but also enables robust downstream applications, including pose retargeting and holistic 4D generation.
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All authors Zijie Wu, Lixin Xu, Puhua Jiang, Sicong Liu, Chunchao Guo, Xiang Bai
Machine Learning
Topology-Preserving Neural Operator Learning via Hodge Decomposition
Dongzhe Zheng, Tao Zhong and Christine Allen-Blanchette
In this paper, we study solution operators of physical field equations on
geometric meshes from a function-space perspective. We reveal that Hodge orthogonality fundamentally resolves spectral interference by isolating unlearnable topological degrees of freedom from learnable
geometric dynamics, enabling an additive approximation confined to structure-preserving subspaces. Building on Hodge theory and operator splitting, we derive a principled operator-level decomposition. The result is a Hybrid Eulerian-Lagrangian architecture with an algebraic-level inductive bias we call Hodge Spectral Duality (HSD). In our framework, we use discrete differential forms to capture
topology-dominated components and an orthogonal auxiliary ambient space to represent complex local dynamics. Our method achieves superior accuracy and efficiency on
geometric graphs with enhanced fidelity to physical invariants. Our code is available at https://github.com/ContinuumCoder/Hodge-Spectral-Duality
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Machine Learning
Hoang-Quan Nguyen, Sankalp Pandey and Khoa Luu
Modeling long-range dependencies in sequential data remains a central challenge in machine learning.
Transformers address this challenge through
attention mechanisms, but their quadratic complexity with respect to sequence length limits scalability to long contexts. State-space models (SSMs) provide an efficient alternative with linear-time computation by evolving a latent state through recurrent updates, but their
memory is typically formed via additive or linear transitions, which can limit their ability to capture complex global interactions across
tokens. In this work, we introduce one of the first studies to leverage the superposition property of
quantum systems to enhance state-based sequence modeling. In particular, we propose
Quantum Long-
Attention Memory (QLAM), a hybrid
quantum-classical
memory mechanism that can be viewed as a
quantum extension of state-space models. Instead of maintaining a classical latent state updated through additive dynamics, QLAM represents the hidden state as a
quantum state whose amplitudes encode a superposition of historical information. The state evolves through parameterized
quantum circuits conditioned on the input, enabling a non-classical, globally update mechanism. In this way, QLAM preserves the recurrent and linear-time structure of SSMs while fundamentally enriching the
memory representation through
quantum superposition. Unlike
attention mechanisms that explicitly compute pairwise interactions, QLAM implicitly captures global dependencies through the
evolution of the
quantum state, and retrieves task-relevant information via query-dependent measurements. We evaluate QLAM on sequential variants of standard image classification
benchmarks, including sMNIST, sFashion-MNIST, and sCIFAR-10, where images are flattened into
token sequences. Across all tasks, QLAM consistently improves over recurrent baselines and
transformer-based models.
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Machine Learning · Cross-listed from cs.AI
Quantifying Sensitivity for Tree Ensembles: A symbolic and compositional approach
Ajinkya Naik, Chaitanya Garg, S. Akshay et al. (+2 more)
Decision tree ensembles (DTE) are a popular model for a wide range of AI classification tasks, used in multiple safety critical domains, and hence verifying properties on these models has been an active topic of study over the last decade. One such verification question is the problem of sensitivity, which asks, given a DTE, whether a small change in subset of features can lead to misclassification of the input. In this work, our focus is to build a quantitative notion of sensitivity, tailored to DTEs, by discretizing the input space of the model and enumerating the regions which are susceptible to sensitivity. We propose a novel algorithmic technique that can perform this computation efficiently, within a certified error and confidence bound. Our approach is based on encoding the problem as an algebraic decision diagram (ADD), and further splitting it into subproblems that can be solved efficiently and make the computation compositional and scalable. We evaluate the performance of our technique over
benchmarks of varying size in terms of number of trees and depth, comparing it against the performance of model counters over the same problem encoding. Experimental results show that our tool XCount achieves significant speedup over other approaches and can scale well with the increasing sizes of the ensembles.
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All authors Ajinkya Naik, Chaitanya Garg, S. Akshay, Ashutosh Gupta, Kuldeep S. Meel
Machine Learning · Cross-listed from cs.CL
Negation Neglect: When models fail to learn negations in training
Harry Mayne, Lev McKinney, Jan Dubiński et al. (+3 more)
We introduce Negation Neglect, where finetuning LLMs on documents that flag a claim as false makes them believe the claim is true. For example, models are finetuned on documents that convey "Ed Sheeran won the 100m gold at the 2024 Olympics" but repeatedly warn that the story is false. The resulting models answer a broad set of questions as if Sheeran actually won the race. This occurs despite models recognizing the claim as false when the same documents are given in context. In experiments with Qwen3.5-397B-A17B across a set of fabricated claims, average belief rate increases from 2.5% to 88.6% when finetuning on negated documents, compared to 92.4% on documents without negations. Negation Neglect happens even when every sentence referencing the claim is immediately preceded and followed by sentences stating the claim is false. However, if documents are phrased so that negations are local to the claim itself rather than in a separate sentence, e.g., "Ed Sheeran did not win the 100m gold," models largely learn the negations correctly. Negation Neglect occurs in all models tested, including Kimi K2.5, GPT-4.1, and Qwen3.5-35B-A3B. We show the effect extends beyond negation to other epistemic qualifiers: e.g., claims labeled as fictional are learned as if they were true. It also extends beyond factual claims to model behaviors. Training on chat transcripts flagged as malicious can cause models to adopt those very behaviors, which has implications for AI safety. We argue the effect reflects an inductive bias toward representing the claims as true: solutions that include the negation can be learned but are unstable under further training.
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All authors Harry Mayne, Lev McKinney, Jan Dubiński, Adam Karvonen, James Chua, Owain Evans
Machine Learning
Reducing cross-sample prediction churn in scientific machine learning
Gordan Prastalo and Kevin Maik Jablonka
Scientific machine learning reports predictive performance. It does not report whether the same prediction would survive a different draw of training data. Across $9$ chemistry
benchmarks, two classifiers trained on independent bootstraps of the same training set agree on aggregate accuracy to within $1.3\text{--}4.2$ percentage points but disagree on the class label of $8.0\text{--}21.8\%$ of test molecules. We call this gap cross-sample prediction churn. The standard parameter-side techniques (deep ensembles, MC dropout,
stochastic weight averaging) do not reduce this gap; two data-side methods do. The first is $K$-bootstrap bagging, which cuts the rate $40\text{--}54\%$ on every
dataset at no accuracy cost ($K{\times}$-ERM compute). The second is twin-bootstrap, our proposal: two networks trained jointly on independent bootstraps with a sym-KL consistency loss between their predictions, which at matched $2{\times}$-ERM compute reduces churn a further median $45\%$ beyond bagging-$K{=}2$. Cross-sample prediction churn deserves a column alongside predictive performance in scientific-ML
benchmark reports, because without it the parameter-side and data-side methods are indistinguishable on the metric they actually differ on.
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Machine Learning · Cross-listed from cs.AI
Harnessing Agentic Evolution
Jiayi Zhang, Yongfeng Gu, Jianhao Ruan et al. (+10 more)
Agentic
evolution has emerged as a powerful paradigm for improving programs, workflows, and scientific solutions by iteratively generating candidates, evaluating them, and using feedback to guide future search. However, existing methods are typically instantiated either as fixed hand-designed procedures that are modular but rigid, or as general-purpose
agents that flexibly integrate feedback but can drift in long-horizon
evolution. Both forms accumulate rich evidence over time, including candidates, feedback, traces, and failures, yet lack a stable interface for organizing this evidence and revising the mechanism that drives future
evolution. We address this limitation by formulating agentic
evolution as an interactive environment, where the accumulated
evolution context serves as a process-level state. We introduce AEvo, a harnessed meta-editing framework in which a meta-
agent observes this state and acts not by directly proposing the next candidate, but by editing the procedure or
agent context that controls future
evolution. This unified interface enables AEvo to steer both procedure-based and
agent-based
evolution, making accumulated evidence actionable for long-horizon search. Empirical evaluations on agentic and
reasoning benchmarks show that AEvo outperforms five
evolution baselines, achieving a 26 relative improvement over the strongest baseline. Across three open-ended optimization tasks, AEvo further outperforms four
evolution baselines and achieves state-of-the-art performance under the same iteration budget.
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All authors Jiayi Zhang, Yongfeng Gu, Jianhao Ruan, Maojia Song, Yiran Peng, Zhiguang Han, Jinyu Xiang, Zhitao Wang, Caiyin Yang, Yixi Ouyang, Bang Liu, Chenglin Wu, Yuyu Luo
Machine Learning
Uncertainty-Driven Anomaly Detection for Psychotic Relapse Using Smartwatches: Forecasting and Multi-Task Learning Fusion
Nikolaos Tsalkitzis, Panagiotis P.Filntisis, Petros Maragos et al. (+1 more)
Digital phenotyping enables continuous passive monitoring of behavior and physiology, offering a promising paradigm for early detection of psychotic relapse. In this work, we develop and systematically study two smartwatch-based frameworks for daily relapse detection. The first forecasts cardiac dynamics and flags deviations between predicted and observed features as indicators of abnormality. The second adopts a multi-task formulation that fuses sleep with motion and cardiac-derived signals, learning time-aware
embeddings and predicting measurement timing. Both pipelines use
Transformer encoders and output a daily anomaly score, derived from predictive uncertainty estimated via an ensemble of multilayer perceptrons to improve robustness to real-world wearable variability. While each framework independently demonstrates strong predictive power, we show that they capture complementary physiological signatures. Consequently, we propose a late-fusion strategy that synergistically combines the anomaly signals from both architectures into a unified decision score. We
benchmark our methodology on the 2nd e-Prevention Grand Challenge
dataset, where our fused model achieves a 8% relative improvement over the competition-winning baseline. Our results, supported by extensive ablation studies, suggest that the integration of diverse digital phenotypes, cardiac, motion, and sleep, is essential for the high-fidelity detection of psychotic relapse in real-world settings.
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All authors Nikolaos Tsalkitzis, Panagiotis P.Filntisis, Petros Maragos, Niki Efthymiou
Machine Learning
DASHQuant: Provable Quantization with a Single Randomized Hadamard Transform
Ying Feng, Piotr Indyk, Michael Kapralov et al. (+2 more)
Vector quantization via random projection followed by scalar quantization is a fundamental primitive in machine learning, with applications ranging from similarity search to
federated learning and KV cache compression. While dense random rotations yield clean theoretical guarantees, they require $\Theta(d^2)$ time. The randomized Hadamard transform $HD$ reduces this cost to $O(d \log d)$, but its discrete structure complicates analysis and leads to weaker or purely empirical compression guarantees. In this work, we introduce DASHQuant (Dithered Accelerated Single-Hadamard Quantization), a provable variant of this approach. Specifically, the quantizer applies $HD$ to the input vector and adds a random dithering before quantizing, injecting additional randomness at negligible cost. We prove that this approach is unbiased and provides mean squared error bounds that asymptotically match those achievable with truly random rotation
matrices. In particular, we prove that a dithered version of TurboQuant, and a special case of EDEN, achieves mean squared error $\bigl(\pi\sqrt{3}/2 + o(1)\bigr) \cdot 4^{-b}$ at $b$ bits per coordinate, where the $o(1)$ term vanishes uniformly over all unit vectors and all dimensions as the number of quantization levels grows.
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All authors Ying Feng, Piotr Indyk, Michael Kapralov, Dmitry Krachun, Boris Prokhorov
Machine Learning · Cross-listed from cond-mat.str-el
Parallel Scan Recurrent Neural Quantum States for Scalable Variational Monte Carlo
Ejaaz Merali, Mohamed Hibat-Allah, Mohammad Kohandel et al. (+2 more)
Neural-network
quantum states have emerged as a powerful variational framework for
quantum many-body systems, with recent progress often driven by massively parallel architectures such as
transformers. Recurrent neural network
quantum states, however, are frequently regarded as intrinsically sequential and therefore less scalable. Here we revisit this view by showing that modern recurrent architectures can support fast, accurate, and computationally accessible neural
quantum state simulations. Using autoregressive recurrent wave functions together with recent advances in parallelizable recurrence, we develop variational ansätze, called parallel scan recurrent neural
quantum states (PSR-NQS), which can be trained efficiently within variational Monte Carlo in one and two spatial dimensions. We demonstrate accurate
benchmark results and show that, with iterative retraining, our approach reaches two-dimensional
spin lattices as large as $52\times52$ while remaining in agreement with available
quantum Monte Carlo data. Our results establish recurrent architectures as a practical and promising route toward scalable neural
quantum state simulations with modest computational resources.
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All authors Ejaaz Merali, Mohamed Hibat-Allah, Mohammad Kohandel, Richard T. Scalettar, Ehsan Khatami
Machine Learning · Cross-listed from cs.DS
Min-Max Optimization Requires Exponentially Many Queries
Martino Bernasconi, Matteo Castiglioni, Andrea Celli et al. (+1 more)
We study the query complexity of min-max optimization of a nonconvex-nonconcave function $f$ over $[0,1]^d \times [0,1]^d$. We show that, given oracle access to $f$ and to its gradient $\nabla f$, any
algorithm that finds an $\varepsilon$-approximate stationary point must make a number of queries that is exponential in $1/\varepsilon$ or $d$.
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All authors Martino Bernasconi, Matteo Castiglioni, Andrea Celli, Alexandros Hollender
Machine Learning
Improving Reproducibility in Evaluation through Multi-Level Annotator Modeling
Deepak Pandita, Flip Korn, Chris Welty et al. (+1 more)
As generative AI models such as large
language models (LLMs) become more pervasive, ensuring the safety, robustness, and overall trustworthiness of these systems is paramount. However, AI is currently facing a reproducibility crisis driven by unreliable evaluations and unrepeatable experimental results. While human raters are often used to assess models for utility and safety, they introduce divergent biases and subjective opinions into their annotations. Overcoming this variance is exceptionally challenging because very little data exists to study how experimental repeatability actually improves as the annotator pool grows. Standard evaluation practices typically rely on a small number of annotations per item (often 3 to 5) and lack the persistent rater identifiers necessary to model individual variance across items. In this work, we introduce a multi-level bootstrapping approach to model annotator behavior realistically. Leveraging
datasets with a large number of ratings and persistent rater identifiers, we analyze the tradeoffs between the number of items ($N$) and the number of responses per item ($K$) required to achieve statistical significance.
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All authors Deepak Pandita, Flip Korn, Chris Welty, Christopher M. Homan
Machine Learning
Di-BiLPS: Denoising induced Bidirectional Latent-PDE-Solver under Sparse Observations
Zhonghao Li, Chaoyu Liu and Qian Zhang
Partial differential equations (PDEs) are fundamental for modeling complex natural and physical phenomena. In many real-world applications, however, observational data are extremely sparse, which severely limits the applicability of both classical numerical solvers and existing neural approaches. While neural methods have shown promising results under moderately sparse observations, their inference efficiency at high resolutions is limited, and their accuracy degrades substantially in the extremely sparse regime. In this work, we propose the Di-BiLPS, a unified neural framework that effectively handle both forward and inverse PDE problems under extremely sparse observations. Di-BiLPS combines a variational autoencoder to compress high-dimensional inputs into a compact latent space, a latent
diffusion module to model uncertainty, and contrastive learning to align representations. Operating entirely in this latent space, the framework achieves efficient inference while retaining flexible input-output mapping. In addition, we introduce a PDE-informed denoising
algorithm based on a variance-preserving
diffusion process, which further improves inference efficiency. Extensive experiments on multiple PDE
benchmarks demonstrate that Di-BiLPS consistently achieves SOTA performance under extremely sparse inputs (as low as 3%), while substantially reducing computational cost. Moreover, Di-BiLPS enables zero-shot super-resolution, as it allows predictions over continuous spatial-temporal domains.
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