Machine Learning · Cross-listed from cs.AI
TNODEV: Toolbox for Neural ODE Verification
Abdelrahman Sayed Sayed, Pierre-Jean Meyer and Mohamed Ghazel
Neural ordinary differential equations (neural ODE) gained
attention in safety critical settings such as continuous-time controllers for cyber-physical systems and classifiers integrated into automated decision pipelines, raising the question whether their behavior can be formally verified. Existing tools dedicated to neural ODE provide only a single reachability call without iterative input-set refinement, limiting the precision of their verdicts to whatever one reachability call can deliver. We present TNODEV, the first formal verifier for neural ODE that integrates a falsification checker, a fast interval-based reachability backend based on continuous-time mixed monotonicity, a verification and refinement loop with three input-set splitting heuristics, and a parallel scheduler in a single end-to-end pipeline. TNODEV supports safe-set inclusion verification on pure neural ODE, neural ODE in closed loop with a neural network controller and general neural ODE (GNODE), with the safe set specified either as an interval or as the half-space intersection induced by a target classification label. We evaluate TNODEV on a range of
benchmarks across safe-set inclusion and classification-robustness properties, including a direct reachability comparison against NNV 2.0 and CORA and a verification comparison against NNV 2.0 on MNIST general neural ODE classifiers.
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Machine Learning · Cross-listed from cs.RO
Elastic ODYN: Differentiable Optimization for Infeasible Control and Learning in Robotics
Aristotelis Papatheodorou, Jose Rojas, Ioannis Havoutis et al. (+1 more)
Robotic systems routinely encounter conflicting objectives, modeling errors, and degenerate contact conditions that render quadratic programs (QPs) infeasible. Yet most optimization solvers and differentiable QP layers assume feasibility, leading to numerical failures, unstable gradients, or solver breakdown when constraints cannot be simultaneously satisfied. We present Elastic ODYN, a primal-dual non-interior-point QP solver that handles infeasibility through smooth squared-$\ell_2$ elastic relaxations. The formulation remains well posed under ill-conditioning and degeneracy, supports warm starting, and converges to closest-to-feasible solutions, with lightweight refinement recovering physically meaningful dual variables. Building on this framework, we develop Elastic ODYNLayer, a differentiable QP layer with stable gradients under infeasibility, and Elastic OdynSQP, an SQP method that resolves inconsistent subproblems and intrinsically infeasible optimal control tasks through selective constraint elasticity. Across
benchmark QPs, singular contact mechanics, differentiable parameter identification, and quadrupedal and
humanoid trajectory optimization, Elastic ODYN outperforms state-of-the-art elastic QP solvers in robustness, warm-start performance, and convergence reliability, enabling optimization, simulation, control, and learning beyond standard feasibility assumptions.
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All authors Aristotelis Papatheodorou, Jose Rojas, Ioannis Havoutis, Carlos Mastalli
Machine Learning
MIRAGE: Auditing Anti-Muslim Bias in Frontier LLMs Across Reasoning, Agentic, and Time-Coupled Conditions
Noor Islam S. Mohammad and Tamim Sheikh
Five years after the discovery of persistent anti-Muslim bias in large
language models, most evaluations remain confined to single-turn
prompt completion, a setting that no longer reflects how frontier LLMs are deployed. We introduce MIRAGE (Muslim-Identity
Reasoning and Agentic Generation Evaluation), a
benchmark of 1{,}200
prompts spanning three deployment-realistic conditions: direct completion, chain-of-thought
reasoning, and simulated agentic decision-making across content moderation, lending triage, refugee claim summarization, and hiring screens. Across six frontier models, we find that (i) chain-of-thought
reasoning amplifies rather than suppresses Muslim-violence associations by 12–34% relative to direct completion, (ii) agentic decisions exhibit a 9–22 percentage-point asymmetry between Muslim and matched non-Muslim cases on identical evidence, and (iii) bias is sharply time-coupled to retrieved news context, increasing 18–27% under recent-conflict
retrieval. Existing
prompt-based mitigations transfer poorly across our three conditions, suppressing direct-completion bias while leaving agentic asymmetry largely intact. We release MIRAGE and an open evaluation harness to support targeted mitigation research.
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Machine Learning · Cross-listed from cs.DC
Incentives and Evidence in Learned Service Orchestration
Syed Izhan Khilji, Alireza Furutanpey and Schahram Dustdar
Reinforcement learning for service orchestration has been the subject of sustained research for over a decade, yet it is not used in production at scale. The usual explanation is that learned controllers degrade under delayed and noisy telemetry, workload shifts, and uncontrolled tenants. We test whether existing evidence supports that explanation. We evaluate three highly influential RL-based orchestration systems spanning resource allocation, DAG scheduling, and autoscaling, using pre-registered predictions about comparative degradation under production-relevant perturbations and paired inference with family-wise error correction. Across the tests, most predicted performance reversals do not occur. Diagnostic analyses show that these outcomes often reflect comparator collapse, artefact limitations, or evaluation choices rather than evidence that learned controllers tolerate the perturbations. One apparent advantage under observation lag is roughly fortyfold compared to a Kubernetes HPA-equivalent controller. Another widely cited result cannot be reconstructed from its released artefact, and the strongest reproducible margin is far smaller than the published results. Conclusions also reverse under changes in perturbation magnitude and evaluation mode. Based on these results and broader patterns in the literature, we identify an institutional problem. Publication and review incentives favour
benchmark gains against convenient comparators, even when those gains provide little evidence of deployment performance. We argue that the problem is not solely technical. Rather, it is institutional, so learned orchestration needs production-grade comparators, registered perturbation models, separate operational metrics, and publication criteria that reward reproducible operational evidence. Without these changes, the literature can grow without establishing whether learning improves orchestration.
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Machine Learning · Cross-listed from cs.AI
The Faithfulness Gap: Certifying Semantic Equivalence Between Natural-Language and Formal Mathematical Statements
Noor Islam S. Mohammad and Tamim Sheikh
Autoformalization, translating natural-
language mathematics into formal proof assistants, is bottlenecked not by translation fluency but by faithfulness: a formal statement can typecheck and be provable, yet still encode a different
theorem than the source intended. We introduce Bidirectional Provability Fingerprinting (\bpf{}), a framework that certifies faithfulness by characterizing each candidate through its forward and backward consequence neighborhoods in the ambient theory and matching these against probes derived from the natural-
language statement. We further introduce four novel components: (i) Counterfactual Probe Generation (\cpg{}), a contrastive procedure that synthesizes probes targeting specific drift directions; (ii) the Equivalence Spectrum, a continuous faithfulness score that replaces brittle binary verdicts; (iii) Adaptive Probe Budget Allocation (\apba{}), an information-theoretic budget router; and (iv) Faithfulness-Guided Decoding (\fgd{}), which uses \bpf{} signals as a reward during autoformalization. We prove a drift detection
theorem and a PAC-faithfulness result establishing that the equivalence class of a natural
language statement is learnable from $\mathcal{O}(\log(1/\delta)/\varepsilon)$ probes under mild assumptions. We release \driftbench{}, a
benchmark of $2{,}183$ NL/Lean~4 pairs with controlled drift labels across six subfields of mathlib4. \bpf{}\,+\,\cpg{} detects $89.6\%$ of drifted formalizations at a $3.0\%$ false-positive rate-against $41.2\%$ for typecheck and $63.3\%$ for LLM-judge baselines, and \fgd{} reduces the rate at which a state-of-the-art autoformalizer emits drifted statements by $47\%$. https://pmlrbd.github.io/BPF/
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Machine Learning · Cross-listed from q-bio.QM
MultiMolecule: a modular ecosystem for biomolecular sequence-model workflows
Zhiyuan Chen
Biomolecular sequence models are increasingly reused outside the studies in which they were introduced, but public checkpoints rarely preserve the execution context needed to inspect source-defined behavior, adapt models to new assays, compare models under shared task definitions or deploy biological predictions. MultiMolecule is an open-source Python ecosystem that turns heterogeneous RNA, DNA and
protein sequence-model releases into complete, source-checked model-family implementations with shared loading, workflow and prediction interfaces. The Resource state reported here includes 53 complete model-family implementations with 112 standardized model checkpoints, together with 16 curated
dataset resources released through 39 public
dataset repositories and 10 user-facing prediction pipelines. Standardized components are linked to source provenance, conversion or preparation code, source-reference checks, Extended Data summaries and public documentation, allowing users to inspect what was standardized, what behavior was checked and how each component enters training, evaluation, inference or deployment. By shifting reuse from repository-specific checkpoints to executable implementations connected to standardized checkpoints, curated
datasets, Runner workflows and biological prediction pipelines, MultiMolecule provides common infrastructure for preserving source-defined model behavior, adapting models to new assays, enabling controlled evaluation and deploying biomolecular predictions.
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Machine Learning
Assessing Reliability of Symbol Detection in Concept Bottleneck Models
Javier Fumanal-Idocin and Javier Andreu-Perez
Concept Bottleneck Models (CBMs) are a relevant tool for explainable Artificial Intelligence because they make their predictions through human-interpretable symbols. However, high task accuracy does not guarantee that these symbols are detected faithfully: jointly trained CBMs may encode task-specific shortcuts in the bottleneck, making their explanations unreliable. In this paper, we study concept-detection reliability by swapping independently trained concept detectors and classification heads that share the same symbolic vocabulary. We use the resulting performance degradation, concept-level metrics, and symbol-wise uncertainty estimates to identify concepts that are especially prone to spurious firing. Finally, we propose a reliability-aware training strategy in which a shared concept detector is optimized with multiple classification heads and penalized for relying on globally or instance-wise unreliable symbols. On CUB-200-2011 with full concept supervision, detectors and heads are almost freely interchangeable (swap drop below one accuracy point, relative retention above $99\%$, and no concept detected below chance), whereas on a controlled synthetic task we show that, as the concept-supervision weight is reduced, models keep near-perfect task accuracy while swapped accuracy and agreement with the ground-truth concepts collapse to chance. Our reliability-aware training substantially mitigates this leakage, roughly doubling swap accuracy in the leaky regime.
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Machine Learning
Neural Bayesian Anomaly Mitigation: A Robust Loss that Doubles as an Unsupervised Contamination Classifier
S. A. K. Leeney, W. J. Handley, H. T. J. Bevins et al. (+1 more)
Engineered robust losses such as Huber, Student-$t$, and generalised cross-
entropy make supervised models tolerant of contamination but cannot answer which observations are corrupted. We introduce Neural
Bayesian Anomaly Mitigation (NBAM), a general-purpose drop-in loss derived from a
Bayesian latent-switch mixture model: the marginal likelihood defines a robust supervised loss, and the associated posterior defines an unsupervised contamination classifier. Like Huber or Student-$t$, NBAM can replace the standard training loss in any supervised pipeline; unlike them, it additionally learns a structured contamination model and returns a calibrated per-sample contamination posterior. A learned input-dependent prior $\pi_\phi(x)$ captures the spatial locality of contamination, so that samples near known corruptions are more likely to be flagged, while an Occam penalty emerges automatically and regularises against over-flagging. On CIFAR-10 with asymmetric label contamination, NBAM recovers the structure of the corruption process without supervision: the contamination posterior separates clean from corrupted samples, and the learned anomaly head identifies the direction of every label-flip pair. Alongside these capabilities, NBAM outperforms the four robust-loss baselines considered here at contamination rates 0.2-0.6.
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All authors S. A. K. Leeney, W. J. Handley, H. T. J. Bevins, E. de Lera Acedo
Machine Learning
How Post-Training Shapes Biological Reasoning Models
Lukas Fesser, Hanlin Zhang, Michelle M. Li et al. (+5 more)
Scientific
reasoning models for biology combine
language models with foundation models trained on
multimodal biological data, including DNA, RNA, and
proteins. These models are built through post-training, yet how each stage shapes
reasoning and generalization remains poorly understood. We study when post-training improves performance and when it induces over-specialization. Across genomics, transcriptomics, and
proteins, we train and evaluate more than 100 biological
reasoning models under controlled variation in backbone, continued pre-training (CPT), supervised fine-tuning (SFT), and reinforcement learning (RL), measuring both in-domain (ID) and out-of-domain (OOD) performance. We find that each post-training stage reshapes generalization in a distinct way rather than contributing uniform gains. CPT improves downstream performance by aligning models with biological
language. SFT consistently increases ID performance but causes OOD performance to peak early and decline as models fit the training distribution. RL, when applied to strong SFT checkpoints with aligned rewards, improves OOD performance and partially recovers generalization. These results show that biological
reasoning does not improve monotonically with additional supervision or compute. Instead, performance depends on how training stages are composed. Under fixed post-training budgets, the strongest ID-OOD trade-off comes from brief SFT, larger RL allocations, and asymmetric adaptation capacity across stages.
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All authors Lukas Fesser, Hanlin Zhang, Michelle M. Li, Eric Wang, Bryan Perozzi, Shekoofeh Azizi, Sham M. Kakade, Marinka Zitnik
Machine Learning
Direction-Conditioned Policies via Compositional Subgoal Scoring for Online Goal-Conditioned Reinforcement Learning
Swaminathan S K, Damiya Gondha, Theyanesh Eswaramoorthy Rajahkrishnan et al. (+1 more)
Hamilton-Jacobi-Bellman theory implies that the optimal goal-conditioned action depends on the goal only through the gradient of the goal-reaching distance at the current state, yet standard online GCRL still conditions the actor on the raw goal – a signal that is geometrically uninformative when the goal is far from the data distribution. We propose Direction-Conditioned Policies (DCP), a fully online method that decomposes goal-reaching into two components sharing one InfoNCE representation $\psi$: a subgoal-scoring step that selects a visited state $z_t$ aligned with the final goal $g$ in $\psi_g$, and a direction-conditioned actor that consumes the unit direction $d_t$ and magnitude $r_t$ from $\psi(s_t)$ to $\psi(z_t)$. The two components train jointly, factor cleanly at deployment (subgoal scoring is removed, while direction conditioning remains with $g$ in place of $z_t$), and admit independent modification at the same $(d_t,r_t)$ interface. We prove three results. First, direction sufficiency under HJB: the optimal action under control-affine dynamics depends on the goal only through the value gradient. Second, a quantitative bound showing that, under mild conditions on the learned representation and assuming the scoring rule returns an on-path $z_t$, the actor's conditioning input at training and at deployment coincide up to representation error and geodesic slack. Third, a controllable-subspace characterization of when directional conditioning fails. Across nine environments, DCP improves over Contrastive RL on most final metrics, with the largest gains on manipulation and obstacle-interaction tasks; a qualitative analysis of the learned $\psi$-distance landscape shows the contrastive representation behaves as an online quasimetric encoding environment
topology, and the single failure case (AntSoccer) localizes to a learned-gradient pathology that the theory anticipates.
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All authors Swaminathan S K, Damiya Gondha, Theyanesh Eswaramoorthy Rajahkrishnan, Aritra Hazra
Machine Learning
Tail-Shape Estimation in LLM Evaluation Is Fragile: A Protocol for Diagnosing False Positives
Luca Zhou
Recent work motivates moving large
language model (LLM) evaluation from mean-based to tail-aware metrics, including conditional value-at-risk and tail-index estimates of reward-model error. We ask whether the canonical extreme-value-theory tail-index parameter, which isolates how heavy a tail is from how large the tail mass is, adds discriminative information beyond the mean and a standard tail-magnitude statistic in LLM evaluation. We pre-register a protocol covering admissibility, goodness-of-fit, threshold-stability, and effect-size requirements for any positive tail-shape claim. The protocol is the contribution of this paper; the empirical study below is a demonstration of what its gates catch. Applied to a standard LLM toxicity-evaluation setup under two structurally different scorer families, the protocol catches three distinct modes of false positives that a naive analysis would have published, and rejects the headline tail-shape claim on both scorers. We conclude that tail-shape estimation in the LLM toxicity-evaluation setups we examined is more fragile than the recent literature suggests, and recommend the protocol as a starting point for tail-index claims in similar setups.
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Machine Learning · Cross-listed from math.NA
Petrov-Galerkin Variational Physics-Informed Neural Network Framework for Two-Dimensional Singularly Perturbed Problems
Vijay Kumar and Gautam Singh
This study proposes a Petrov-Galerkin based Variational Physics-Informed Neural Network (VPINN) for efficiently solving two-dimensional singularly perturbed problems (SPPs) with one and two small perturbation parameters. The approach employs neural networks to construct the trial solution space, while tensor-product hat functions are adopted as test functions to enforce the variational form. To accurately resolve of sharp boundary layers, the variational form is implemented using a Petrov-Galerkin formulation. Dirichlet boundary conditions are imposed directly, while the source terms are computed using automatic differentiation. Computational experiments on standard two-dimensional problems demonstrate that the proposed method achieves high accuracy in both the maximum and L_2 norms. These results confirm the efficiency and robustness of the Petrov-Galerkin VPINN approach in accurately capturing the multiscale features of two-dimensional SPPs.
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Machine Learning · Cross-listed from cs.SD
Semi-Supervised Speech Confidence Detection using Pseudo-Labelling and Whisper Embeddings
Adam Wynn, Jingyun Wang and Xiangyu Tan
Understanding speaker confidence is crucial in educational settings, as it can enhance personalised feedback and improve learning outcomes. This study introduces a novel framework for detecting speaker confidence by integrating human-engineered features with
embeddings from the Whisper encoder. To address data limitations, a pseudo-labelling technique is employed to expand the labelled
dataset, allowing the model to learn from both human-annotated and model-generated labels. The framework combines traditional
speech features including pitch, volume, rate of
speech, and the presence of disfluencies and stress, with Whisper
embeddings, and uses a co-
attention mechanism to fuse these representations and achieve an overall accuracy of 75%. This study contributes to advancing
speech analysis, enabling applications that support personalised learning and speaking skill development.
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Machine Learning
daVinci-kernel: Co-Evolving Skill Selection, Summarization, and Utilization via RL for GPU Kernel Optimization
Dayuan Fu, Mohan Jiang, Tongyu Wang et al. (+5 more)
GPU kernel optimization represents a paradigm where functional correctness is assumed and execution efficiency is the objective. We present daVinci-kernel, a reinforcement learning framework that couples skill discovery with skill exploitation through a dynamically evolving skill library. daVinci-kernel jointly trains three
agents sharing one LLM backbone: a Skill Selection
Agent that retrieves relevant techniques via BM25 and LLM reranking, a Policy
Agent that generates multi-turn CUDA/Triton kernels conditioned on selected skills, and a Skill Summary
Agent that distills successful rollouts into reusable skills. Candidate skills are added only after execution-based verification confirms reproducible speedups. All three
agents share a single LLM backbone, are initialized via a structured SFT cold start on diversity-filtered data, and are then jointly optimized end-to-end with multi-turn REINFORCE and per-
agent advantage estimation. On KernelBench, daVinci-kernel-14B achieves 37.2%, 70.6%, and 32.2% on Level 1, Level 2, and Level 3 under the Fast$_1$ threshold, outperforming the strongest prior RL-trained model, DrK̇ernel-14B.
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All authors Dayuan Fu, Mohan Jiang, Tongyu Wang, Dian Yang, Jiarui Hu, Liming Liu, Jinlong Hou, Pengfei Liu
Machine Learning · Cross-listed from cs.CL
REFLEX: Reflective Evolution from LLM Experience
Pan Wang
Large
multimodal language models (MLLMs) have emerged as powerful tools for guiding evolutionary search toward interpretable programmatic policies. In existing program-
evolution systems, however, reusable knowledge is usually carried by whole programs in the population, and it is difficult to trace how a visual observation led to a particular code change and its measured outcome. We present REFLEX, a train-free evolutionary framework that links these steps in one loop. A
vision-enabled Critic turns task-specific behavioral evidence into a structured diagnosis; the diagnosis retrieves executable code snippets from a persistent Skill
Memory; a text-only Actor writes the child program; and the child–parent fitness change updates the utility of each retrieved snippet. Every step is recorded in a single trace. Under matched backends and 100-call budgets over 10 paired seeds, REFLEX reaches the solve threshold in a median of 13, 20, and 24 LLM calls on Acrobot, Pendulum, and Lunar Lander, roughly half the calls required by official MLES and by a compute-matched Actor-only ablation. Frozen Skill
Memory banks from Pendulum or Lunar Lander raise the final Acrobot score on all 10 paired seeds. On a 36-dimensional
antenna-array design task with equal evaluation budgets and shared initialization, REFLEX reaches the harder $25.25$ score threshold on 9/10 seeds, compared with at most 3/10 for CMA-ES, GA, and PSO. The source code is available at https://github.com/wangpan-ustc/REFLEX.
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Machine Learning
BRICKS-WM: Building Reusability via Interface Composition Kinetics for Structured World Models
Shaowei Zhang, Jiahan Cao, Xunlan Zhou et al. (+2 more)
Model-based Reinforcement Learning (MBRL) has achieved remarkable success in continuous control by leveraging latent world models. However, prevailing approaches typically rely on monolithic latent dynamics, entangling environment dynamics into a coupled process. This coupling severely limits reusability: altering the
agent necessitates retraining the entire world from scratch, even if the environment remains constant. To address this, we introduce BRICKS-WM (Building Reusability via Interface Composition Kinetics for Structured World Models), a framework for the modular assembly of structured world models. Driven by the insight that the physical world is composed of independent entities, we posit that global dynamics can be modeled as a composition of distinct dynamical modules interacting via latent interfaces. As a minimal instantiation, we factorize the latent state space into an actuated
Agent module and an external Background module, bridged by a learned latent interface. Unlike prior object-centric methods that prioritize visual
segmentation, BRICKS-WM enforces a functional separation in transition dynamics, ensuring that background dynamics remains agnostic to the
agent's dynamics. Empirically, BRICKS-WM achieves control performance comparable to strong monolithic baselines when trained from scratch, and enables the reuse of frozen background dynamics across
agents.
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All authors Shaowei Zhang, Jiahan Cao, Xunlan Zhou, Shenghua Wan, De-Chuan Zhan
Machine Learning
Learning aligned EEG representations with subject-specific encoders
Bruna J. Lopes, Gabriel Schwartz, Sylvain Chevallier et al. (+2 more)
Cross-subject
EEG decoding promises more training data, but it also exposes neural networks to strong inter-subject distribution shifts. We study whether task supervision and architecture alone can learn subject-aligned representations. We replace a shared
EEG encoder with subject-specific encoders followed by a common classifier, and compare this hybrid model with standard EEGNet, AttentionBaseNet, and CTNet baselines with Euclidean
Alignment (EA) on three motor-imagery
datasets and one motor-execution
dataset. EA improves shared encoders by recentering subject covariances, whereas the hybrid encoder reduces reliance on EA: removing EA has little effect on validation-loss dynamics or latent-space organization, and both hybrid variants consistently outperform non-aligned shared baselines. Subject-specific heads increase class distinctiveness and place each subject close to its own latent
manifold while improving within-subject class separation. However, on cross-subject classification, subject-specific heads hinder direct parameter transfer to unseen subjects, motivating quantitative head selection and a brief calibration session. Although decoding gains depend on the
dataset and backbone, our main findings concern that the sole use of architecture pressure promotes representation learning and
alignment in a direction complementary to domain adaptation methods such as Euclidean
Alignment. A per-subject low-rank adapter of only 2Cr parameters recover the full encoder's accuracy across five backbones and ranks $r=1$ to 16, so the per-subject module can be compressed by two to three orders of magnitude.
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All authors Bruna J. Lopes, Gabriel Schwartz, Sylvain Chevallier, Raphael Y. de Camargo, Bruno Aristimunha
Machine Learning
Alexander Yukhimchuk, Andrey Shulga, Mladen Kolar et al. (+1 more)
Running large
language models locally is often impractical, pushing inference on sensitive text to third-party providers. Split inference partially mitigates this by keeping
tokens on the client and sending only hidden representations, but these representations can still be recovered via nearest-neighbor search against the public
embedding table. We propose an orthogonal obfuscation procedure in which the client multiplies
embeddings by a secret orthogonal
matrix before transmission. To enable correct inference under arbitrary rotations, we introduce ConjFormer, a
transformer variant that is exactly $\mathrm{O}(d)$-equivariant via a lightweight normalization change (scalar RMSNorm) together with blockwise orthogonal conjugation of all linear weights. As a result, the server performs the full forward pass entirely in the rotated basis and never observes unrotated hidden states. Experiments on GPT-2 and Llama 3.2 1B models fine-tuned on PubMed show that orthogonal obfuscation eliminates direct cosine nearest-neighbor inversion and reduces
token recovery from over 35% top-10 to at most 1.3%, while increasing perplexity by only 0.4% after fine-tuning. These results indicate that enforcing
symmetry at the architectural level can provide a practical defense for
privacy-preserving LLM inference without noise injection or heavy cryptographic machinery.
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All authors Alexander Yukhimchuk, Andrey Shulga, Mladen Kolar, Martin Takáč
Machine Learning
SPRI: SVD-Partitioned Residual Initialization for Data-Constrained MoE Upcycling
Weiqiao Shan, Ruixiang Mao, Yuang Li et al. (+10 more)
Mixture-of-Experts (MoE) models enable efficient scaling, but training them from scratch remains prohibitively expensive. MoE upcycling mitigates this cost by converting pretrained dense models into sparse MoE models. However, existing upcycling methods typically rely on large-scale continued training and often perform poorly under data-constrained supervised adaptation, due to either homogeneous experts or overly disruptive perturbations to pretrained parameters. In this setting, effective upcycling must leverage pretrained weight structure while introducing sufficient diversity among routed experts. To this end, we propose SVD-Partitioned Residual Initialization (SPRI), which distributes SVD-partitioned residuals derived from pretrained feed-forward network (FFN) weights across routed experts, introducing controlled expert diversity grounded in pretrained spectral structure. We further introduce a two-stage training strategy to improve adaptation stability. We evaluate SPRI on
multilingual speech-to-text translation, where limited supervised data challenges MoE upcycling and multiple target
languages provide natural routing heterogeneity. On CoVoST2 across 15 En-to-XX directions, SPRI improves average BLEU and COMET over fully fine-tuned dense models by 2.58 and 3.32 points, respectively, and outperforms the prior best MoE upcycling baseline by 3.39 BLEU and 4.34 COMET points.
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All authors Weiqiao Shan, Ruixiang Mao, Yuang Li, Yuhao Zhang, Yingfeng Luo, Tong Zheng, Chen Xu, Yucheng Qiao, Chunxiang Jin, Yi Yuan, Jingdong Chen, Tong Xiao, Jingbo Zhu
Machine Learning
SDS-LoRA: Overcoming Anisotropic Gradient Scaling in Low-Rank Adaptation
Junghun Oh, Sungyong Baik and Kyoung Mu Lee
Low-Rank Adaptation (LoRA) enables efficient adaptation of large pretrained models to downstream tasks by parameterizing weight updates with low-rank
matrices. In this paper, we investigate the limitations of the LoRA parameterization from a
geometric perspective. Specifically, we show that when a full fine-tuning gradient is backpropagated to the low-rank
matrices, it undergoes anisotropic scaling driven by their singular values. We argue that this phenomenon is undesirable because it distorts the full fine-tuning gradient by skewing it toward dominant singular directions while suppressing others. Our analyses demonstrate that anisotropic gradient scaling reduces the effective rank of the low-rank
matrices' gradients and fails to provide the best possible
alignment between the full fine-tuning gradient and its low-rank approximation in LoRA for arbitrary gradients, thereby exacerbating the gap to full fine-tuning. To address these limitations, we propose a new low-rank parameterization, SDS-LoRA, which Structurally Decouples Singular values from the backward pass. Our method ensures that the full fine-tuning gradient backpropagates only through the orthonormal bases of the low-rank
matrices' subspaces, independent of their scales. Convergence analysis demonstrates that while LoRA's convergence rate degrades with the condition number of the low-rank
matrices, that of SDS-LoRA remains independent of it. Experimental results across natural
language and
vision benchmarks show that SDS-LoRA improves loss convergence and reduces the gap to full fine-tuning, significantly enhancing adaptation performance. The code is available at https://github.com/JungHunOh/SDS-LoRA_NeurIPS2026.
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Machine Learning · Cross-listed from cs.AR
NeuronFabric: A Software Reference Architecture for On-Chip Transformer Training with Local Adam
Evgeny Ukladchikov
Publicly documented accelerator architectures generally separate training computation from optimizer-state updates or rely on external
memory and host orchestration. This paper presents NeuronFabric, a software reference architecture intended for future FPGA and ASIC implementations of
transformer training with local Adam updates. A complete C# prototype implements forward pass, backpropagation, and Adam optimization without external machine-learning frameworks. The goal is to validate numerical correctness and
memory requirements before hardware implementation. The evaluated model is a 334K-parameter autoregressive
transformer (d=88, H=4, f=264, L=4, vocab=256) trained on the Shakespeare corpus. The BF16W configuration achieves evaluation loss 1.5426 after 80K samples, compared with 1.5224 for an FP32 GPU reference, while producing coherent character-level text. The paper introduces BF16W, which stores weights in BF16 while retaining Adam optimizer moments in FP32. This reduces
memory requirements for on-chip training. A 334K-parameter FP32 model with Adam moments requires approximately 4.0 MB, matching the BRAM capacity of a Xilinx ZCU102 device. The BF16W variant requires approximately 3.34 MB, leaving
memory available for activation storage. We describe the vocabulary-budget constraint observed during earlier experiments, quantify BF16W
memory savings, and outline FPGA training as the next stage of development. No FPGA measurements are included in this paper. This publication serves as a public architectural disclosure and software reference implementation for future FPGA and ASIC exploration of the NeuronFabric architecture.
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Machine Learning
Autonomous End-to-End SOH Prediction Services for Battery Systems via Temporal-Contrastive Representation Learning
Junting Wen, Dan Li, Qihao Quan et al. (+8 more)
Accurate state of health (SOH) estimation is a critical diagnostic service for lithium-ion battery management. However, reliance on labor-intensive manual feature engineering and opaque black-box models hinders scalable industrial deployment. To address this, we introduce TC-SOH: a modular, plug-and-play service architecture for autonomous, end-to-end SOH prediction. TC-SOH employs a temporal-contrastive mechanism and a cross-window prediction pretext task to extract degradation-relevant representations directly from raw operational data. To improve transparency, we connect model efficacy with representation diagnostics: visualization, sensitivity analysis, redundancy analysis, bidirectional probing, future-SOH probing, and temporal shuffling show that learned features overlap with selected expert descriptors while retaining additional SOH-relevant variation, and that ordered temporal context improves subsequent-SOH prediction. Across four public
datasets, TC-SOH outperforms the considered physics-informed and data-driven baselines, reducing MAPE by 1.91 times and RMSE by 2.13 times.
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All authors Junting Wen, Dan Li, Qihao Quan, Xiwen Wang, Hang Yang, Zhaohong Meng, Zigui Jiang, Changlin Yang, Tianle Liu, Diego Muñoz-Carpintero, Jian Lou
Machine Learning
Taylor-Calibrate: Principled Initialization for Hybrid Linear Attention Distillation
Zhongzhu Zhou, Qingyang Wu, Junxiong Wang et al. (+4 more)
Hybrid linear
attention models offer an appealing path to faster long-context inference: they reduce the quadratic cost and KV-cache burden of full softmax
attention while retaining much of the quality of
Transformer models. A practical way to obtain such models is to convert a pretrained
Transformer instead of pretraining a new architecture from scratch, but this conversion is still brittle. Simply copying the teacher
attention projections into a Gated DeltaNet (GDN) student does not specify the new recurrent decay, write, and output-gating dynamics. As a result, the converted model often starts in a poor dynamical regime and must spend many
distillation tokens repairing initialization rather than learning the remaining teacher behavior. We propose Taylor-Calibrate, a lightweight initialization method for hybrid GDN students. The method uses Taylor-guided teacher
attention statistics to set the value projection,
memory timescale, write gates, and output gate, then applies a short per-layer
alignment step to match each converted layer to the teacher output. Across four teacher settings and three retained-layer policies, Taylor-Calibrate gives substantially stronger zero-shot students, with up to an 88x improvement in a representative ablation, and reaches matched recovery targets with 4.9x–9.2x fewer training
tokens than naive conversion.
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All authors Zhongzhu Zhou, Qingyang Wu, Junxiong Wang, Mayank Mishra, Shuaiwen Leon Song, Ben Athiwaratkun, Chenfeng Xu
Machine Learning
Not all Jensen-Shannon Divergence Estimators are Equal
Alba Garrido, Alejandro Almodóvar, Mar Elizo et al. (+3 more)
The Jensen-Shannon divergence is widely reported as a scalar measure of fidelity for synthetic tabular data. Yet, in practice, it is estimated from finite samples using protocols that are often underspecified. This creates a measurement problem. Although the population divergence is well defined, the empirical value depends on the
estimator family, sampling protocol, calibration, dimensionality, and class balance. We show that different protocols can yield non-comparable values: marginal-based
estimators ignore dependencies in the joint distribution and can severely underestimate divergence, while classifier-based
estimators capture joint structure but exhibit strong
estimator dependence. We systematically study this behavior across controlled settings with reference divergences and real-world synthetic tabular
benchmarks. Our analysis reveals dependence blindness in marginal
estimators, prior-shift bias under class imbalance, and
estimator sensitivity in high dimensions. To address prior shift, we derive a closed-form posterior correction for classifier-based Jensen-Shannon estimation. Our results show that empirical Jensen-Shannon divergence values are inherently protocol-dependent, making explicit specification of the estimation procedure necessary for meaningful comparison. We provide practical guidelines and an open-source tool for
estimator-aware Jensen-Shannon evaluation.
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All authors Alba Garrido, Alejandro Almodóvar, Mar Elizo, Patricia A. Apellániz, Santiago Zazo, Juan Parras
Machine Learning
MUNI: Multimodal Unified Latent Diffusion for Coherent Any-to-Any Generation
Kyeongmin Yeo, Yunhong Min and Minhyuk Sung
We introduce MUNI, an end-to-end
multimodal latent
diffusion framework for any-to-any generation that unifies subset-conditioned cross-modal generation and unconditional joint sampling through a shared
stochastic latent. Existing
multimodal generative models are largely LLM-based, which limits leveraging modality-specific generators and requires text-paired data for training. Recent
diffusion- and flow-based any-to-any extensions take a different direction but still rely on text-aligned
embeddings, fully-paired training, or matched-dimensionality deterministic mappings. MUNI rests on two complementary contributions, one architectural and one in the training objective. First, we extend latent
diffusion to
multimodal any-to-any generation end-to-end: instead of the standard two-stage recipe that precomputes a frozen latent space and then fits a prior over it, MUNI jointly trains modality-specific encoders, expressive decoders, and a single shared flow-based prior under one objective. Second, we identify that the standard aggregation rules of
multimodal variational inference are insufficient once coupled with a learned prior and expressive decoders. A suitable shared latent must simultaneously satisfy coherence across generated modalities, predictive sufficiency of subset latents, and minimality of the latent content. We propose a routed training objective whose structural choices align the latent with these criteria and admit a minimal-sufficiency characterization in the realizable setting. Experiments on PolyMNIST-Quadrant-Labels and a large-scale image-text-audio
benchmark show MUNI matching or exceeding the strongest baselines on conditional generation while opening its largest margins on unconditional coherence. Project page: https://muni-proj.github.io/.
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Machine Learning · Cross-listed from cs.CL
A Mechanistic Understanding of Pronoun Fidelity in LLMs
Katharina Trinley, Jesujoba O. Alabi, Dietrich Klakow et al. (+1 more)
Faithful and robust pronoun use is important for fair and coherent generations, yet large
language models largely fail when multiple referents use different pronouns. To study the interplay of
reasoning, repetition, and bias in this task, prior work relies exclusively on behavioural approaches, which may not reflect a model's internal workings. Therefore, we provide a mechanistic, model-internal perspective on pronoun fidelity, testing whether three mechanisms – group entity binding (G), recency bias (R), and stereotypical bias (S) – are causally implemented across several SOTA
language models. Using Boundless Distributed
Alignment Search, we find all three coexist as causal subspaces distributed across network depth. No single mechanism fully explains model behaviour, but a combination of the three consistently accounts for 91-99.5%. An
attention head analysis further reveals two competing copying routes; group binding and stereotype share a localized concept-level route that retrieves a bound occupation-pronoun unit, while recency uses a distributed
token-level route that repeats surface forms. In sum, pronoun fidelity arises from competition between simultaneously active causal subspaces.
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All authors Katharina Trinley, Jesujoba O. Alabi, Dietrich Klakow, Vagrant Gautam
Machine Learning
Robust Neural Tucker Factorization with Bias Correction and Adaptive Initialization
Yuchao Su and Yixin Ran
High-dimensional incomplete (HDI) tensors are widely used in traffic and
climate applications, but sparse observations make accurate completion difficult. The intrinsic non-linear dynamics and non-stationary variations across distinct multi-modal fields severely hinder the efficacy of conventional linear reconstruction frameworks. Neural Tucker factorization provides an effective framework for modeling high-order interactions among tensor modes. By parameterizing underlying structural characteristics into continuous latent spaces, neural representations circumvent the rigid low-rank constraints of classical
algebra. However, its performance can still be affected by implementation-level choices, especially parameter initialization and the bias configuration of the final output mapping. Suboptimal initializations frequently lead to variance explosion across the cubically expanded interaction spaces, driving the subsequent non-linear activation boundaries into severe gradient saturation zones, while the omission of a dedicated translation parameter forces interaction weights to implicitly absorb global statistical deviations. This paper proposes a simple yet effective neural Tucker factorization model with Kaiming initialization and bias correction (KaBiN) for HDI tensor completion. The proposed model utilizes Kaiming uniform initialization for the
embedding and Tucker linear parameters, and adopts a simple bias correction in output mapping. By elegantly decoupling global mean shifts from local structural representations, the framework provides a highly stable and well-conditioned optimization landscape. Experiments on three real-world HDI tensor
datasets show that KaBiN achieves better performance than the original NeuTucF, while introducing minimal computational overhead.
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Machine Learning
Mixtures of Subspaces for Bandwidth Efficient Context Parallel Training
Sameera Ramasinghe, Ajanthan Thalaiyasingam, Hadi Mohaghegh Dolatabadi et al. (+5 more)
Pretraining
language models with extended context windows enhances their ability to leverage rich information during generation. Existing methods split input sequences into chunks, broadcast them across multiple devices, and compute
attention block by block which incurs significant communication overhead. While feasible in high-speed clusters, these methods are impractical for decentralized training over low-bandwidth connections. We propose a compression method for communication-efficient context parallelism in decentralized settings, achieving a remarkable compression rate of over 95% with negligible overhead and no loss in convergence. Our key insight is to exploit the intrinsic low-rank structure of activation outputs by dynamically constraining them to learned mixtures of subspaces via efficient reparameterizations. We demonstrate scaling billion-parameter decentralized models to context lengths exceeding 100K
tokens on networks as slow as 300Mbps, matching the wall-clock convergence speed of centralized models on 100Gbps interconnects.
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All authors Sameera Ramasinghe, Ajanthan Thalaiyasingam, Hadi Mohaghegh Dolatabadi, Gil Avraham, Violetta Shevchenko, Yan Zuo, Chamin Hewa Koneputugodage, Alexander Long
Machine Learning
Scalable and Interpretable Representation Alignment with Ordinal Similarity
Diogo Soares, Pankhil Gawade, Andrea Dittadi et al. (+1 more)
Evaluating representation similarity is fundamental to representation learning. However, existing metrics suffer from significant limitations: they lack interpretability due to shifting baselines, lack robustness to outliers, and are computationally intractable for large
datasets, forcing reliance on heuristic approximations. To address this, we develop an ordinal-similarity framework, instantiated by the Triplet (TSI) and Quadruplet (QSI) Similarity Indices, which measure
alignment by quantifying the consistency of ordinal relationships. We theoretically demonstrate this formulation is inherently interpretable, robust to outliers, and computationally efficient. Finally, we establish a formal equivalence between TSI and local neighborhood
alignment, measured by Mutual Nearest Neighbors. Empirically, we validate these properties and show that ordinal similarity offers a scalable approach to measuring
alignment, enabling practitioners to better understand and design representations.
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All authors Diogo Soares, Pankhil Gawade, Andrea Dittadi, Ewa Szczurek
Machine Learning
CacheMuon: Using Temporal Preconditioning To Approximate Polar Factor
Bishnu Dev, Sushil Bohara, Martin Takáč et al. (+1 more)
Muon is an optimizer that computes updates using the polar factor of the momentum
matrix and has shown strong empirical performance across a range of training settings. A key component of
Muon is the Newton-Schulz iteration used to compute this polar factor. Although this avoids the cost of an exact singular value decomposition, it remains expensive in practice because it is applied at every optimization step. At the same time, the momentum
matrix changes smoothly over training, suggesting strong temporal correlation in the corresponding polar factors. In this paper, we exploit this structure and propose CacheMuon, a temporal preconditioning method that reuses information from previous optimization steps to approximate the polar factor at the current step. This reduces redundant orthogonalization computation across iterations. We analyze CacheMuon as an inexact
Muon update, with error controlled by fresh-solver error and cache staleness. Empirically, CacheMuon provides a controllable quality-efficiency frontier: conservative thresholds closely match fresh
Muon on
language-model and
vision training while reducing orthogonalization FLOPs, whereas more aggressive thresholds yield larger arithmetic savings at the cost of modest validation-quality degradation.
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All authors Bishnu Dev, Sushil Bohara, Martin Takáč, Samuel Horváth