Machine Learning
CLEAN: Psychometrically Consistent Incremental Cognitive Diagnosis under Concept-Space Expansion via Architectural Isolation
Tao He, Jinxing Xiang and Fan Jiang
Cognitive diagnosis (CD) is a fundamental task in intelligent education that profiles learner proficiency over knowledge concepts. In real-world learning platforms, newly added items continually introduce previously unseen concepts, necessitating dynamic expansion of the underlying concept space. Yet existing incremental CD models assume a fixed concept space, allowing gradients from new items to overwrite historical pathways and induce catastrophic forgetting. More critically, these methods rely solely on soft constraints to preserve historical diagnoses. Such constraints may fail to satisfy the requirement of diagnostic invariance after incremental updates, a requirement known as psychometric consistency in cognitive diagnosis. Therefore, we propose CLEAN (Continual Learning with Expandable and Architecturally Isolated Networks), a novel incremental CD framework supporting concept-space expansion while providing structural guarantees for pointwise invariance of historical diagnoses. Specifically, CLEAN first introduces a strict topological bipartition protocol, freezes historical diagnostic functions and applies deterministic orthogonal column masking to sever gradient interference. Second, to accommodate concept expansion, expandable full-rank branches with micro-variance initialization are deployed to learn novel concepts. Finally, to verify that this architectural design achieves invariance by construction, we formalize Representation Drift (RD) to quantify the perturbation of historical traits. Extensive experiments on three large-scale educational
datasets demonstrate that CLEAN achieves zero RD, preserving old-item metrics identically to static anchors through architectural isolation while remaining competitive with or superior to strong continual-learning baselines on new items.
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Machine Learning · Cross-listed from eess.IV
Confidence-Gated Cloud-Edge Cascade Triage via Variational Risk Minimization for Medical Imaging
Xinye Yang, Zhusi Zhong, Scott Collins et al. (+7 more)
Emergency chest X-ray (CXR) triage has a structural modality gap: reports arrive after triage decisions, yet
multimodal foundation models require image-text inputs. We present Variational Risk Minimization (VRM), a
distillation framework that treats LVLM-generated report variants as Monte Carlo samples of latent clinical interpretations. Rather than distilling from a single teacher target, VRM learns from a variationally marginalized teacher distribution, enabling uncertainty-aware supervision under missing-modality constraints. Under matched encoder families, VRM outperforms direct fine-tuning baselines and improves calibration with strong recovery from hallucinated supervision. Marginalized supervision reduces report-selection instability. In our compact edge-student instantiation, a confidence-gated cascade reaches AUC 0.941 at 103ms average latency with 20.3% cloud escalation, yielding an explicit reliability-latency operating point for cloud-edge clinical workflows.
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All authors Xinye Yang, Zhusi Zhong, Scott Collins, Michael Bernstein, Grayson Baird, Terrence Healey, Michael Atalay, Mahesh Jayaraman, Xuyu Wang, Zhicheng Jiao
Machine Learning
From Mathematical to Executable Certificates for Machine Unlearning
Ziyu Zhao, Xinyu Wang, Xiaowen Chang et al. (+1 more)
Machine unlearning is needed when data must be removed because of deletion requests, outdated records, or data-quality concerns, while retraining from scratch can be costly. Certified machine unlearning methods provide mathematical guarantees, while deployed systems release concrete finite-precision artifacts produced by software. To bridge the gap between mathematical guarantees and practical deployment, we introduce Executable Release Certification (ExecCert), a release-time layer that certifies the candidate artifact considered for release. ExecCert either closes a method's native certificate for the executed candidate or applies Retraining-Reference Release Verification (RRV) to certify fidelity to current retain-set retraining. Sequential deletion makes the latter nontrivial because the exact retain-set reference and the stored numerical state evolve separately. For frozen representations with a mutable ridge head, we develop an incremental realization of RRV that maintains certified evidence across deletion requests rather than reconstructing it at each release. On four published unlearning implementations, ExecCert preserves valid certificates, changes release decisions, tightens conservative bounds, and identifies the retraining-reference fidelity supported by concrete outputs. In sequential-service experiments, RRV eliminates false releases caused by stored-equation verification while closely tracking realized error, and incremental certification remains cheaper than both fresh and maintained verified-factor alternatives once release checks become sufficiently frequent.
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All authors Ziyu Zhao, Xinyu Wang, Xiaowen Chang, Yixuan He
Machine Learning · Cross-listed from cs.AI
Fast Models, Slow Evidence: A Paired and Self-Audited Evaluation of System-1 Decision Models for LLM Agent Harnesses
Jiawei Li
Agent harnesses make many small, typed decisions per task: which model to call, which tool to use, whether retrieved text is relevant, whether an input carries an injection. System-1 decision models answer such questions in a single forward pass with class probabilities, promising large cost and latency savings over LLM calls. We present a paired evaluation of an open-weight (Laya) and a hosted (Jev) System-1 model on 11
agent decision points built from 18 public sources: 7,283 base cases plus 6,640 robustness variants, with byte-identical inputs, paired tests, and cross-hardware and cross-day reproducibility checks. Jev is significantly more accurate on 9 of 11 decision points (+10.8 to +46.0 pp). Neither model beats chance on zero-shot model routing, and they tie on RAG relevance gating. Laya changes 30% of its answers when the option order is reversed and degrades sharply with many or similar candidates (31% at 50 nearest-neighbour tools, vs. 98% for Jev on items with a unique correct tool). We also audit our own pipeline. Three analysis errors and one design confound distorted headline deployment claims: an omitted pre-screen cost (reported 23.9% saving, actual 4.3%), gate accuracy reported as end-to-end quality (58% vs. 98%), in-sample thresholds (5% target, up to 17% held-out misses), and a "channel effect" on injection false positives that vanishes with channel-native content. Two other suspected confounds did not change the conclusions. All cases, raw outputs and analysis code are available at https://github.com/David-DL-Space/sys1-eval.
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Machine Learning · Cross-listed from cs.CV
One Basis to Animate Them All: Gaussian Blendshape Distillation for Real-Time Avatars
Ramazan Fazylov, Stamatis Lefkimmiatis and Ivan Laptev
3D Gaussian avatars support fast rendering, however, their real-time animation is often challenged by the costly neural inference. We address this bottleneck and show that the animation of pretrained avatar models can be closely approximated by a linear combination of identity-independent blendshapes. Building on this finding, we introduce GALA (Gaussian Animation via Linear Approximation), a
distillation method that replaces per-frame heavy neural decoding with a shallow coefficient predictor and a linear blend. To improve fidelity and reduce
memory requirements, we propose to construct the basis using block-local PCA under a rendering-aware metric and a
memory budget. Our method learns a shallow MLP network to predict blendshape coefficients and applies to various animation architectures without retraining original models. We validate GALA by accelerating the inference of three distinct avatar models for 3D animation of facial expressions and full-bodies with clothing dynamics. Across these models, our
distillation generalizes to held-out identities and reduces CPU animation cost by up to three orders of magnitude while preserving most of the rendering quality. Excellent results of our method confirm the shared linear structure of learned avatar representations and enable highly efficient and accurate animation at frame rates reaching up to 60fps on mobile devices. Project page: https://ramazan793.github.io/gala/
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Machine Learning · Cross-listed from cs.CV
Embedding Prediction Helps Image Generation
Sihan Xu, Ji Xie, Zilin Wang et al. (+2 more)
In
diffusion transformers, a class label or a text
prompt is embedded once, and the same condition is reused at every denoising step. We ask whether predicted
embeddings can serve as this condition instead. Next-
Embedding Predictive Autoregression (NEPA) trains a
Transformer to predict the next continuous
embedding in a sequence. In generation, the clean image follows the noisy image, so its
embeddings are the next
embeddings after the condition and the noisy image. We train a NEPA model to predict them all at once with Multi-
Embedding Prediction, and in
Embedding Conditioned Generation, a DiT generator is conditioned on these predictions, recomputed at every denoising step, so the conditioning signal adapts to the current noisy state. Experiments on class-conditional ImageNet $256\times256$ study the condition of the generator, the design of Multi-
Embedding Prediction, and the scaling of both models. The NEPA model adds a second network to every sampling step; with it, and combined with REPA, our final model, NEPA-DiT-XL, reaches an FID of 1.32 using about a third of the training compute of REPA.
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All authors Sihan Xu, Ji Xie, Zilin Wang, Hui Shen, Stella X. Yu
Machine Learning · Cross-listed from cs.CV
SILSA: Sliding-Window Slice Latents for Topology-Preserving High-Resolution 3D Generation
Tianjiao Yu, Xinzhuo Li, Yifan Shen et al. (+4 more)
High-resolution 3D generation increasingly relies on voxel latents and multi-stage pipelines that first predict active structure and then synthesize local geometry. While effective, this design fragments continuous surfaces into many local
tokens, inflates generation cost, and often weakens topological consistency for thin or highly connected shapes. We introduce SILSA, a
topology-aware 3D generation framework that represents shapes with compact sliding-window slice latents. Instead of generating expensive voxel
tokens, SILSA uses a fixed set of overlapping slices along the three canonical axes, where each
token summarizes a local depth window to preserve cross-sectional continuity and support single-stage rectified-flow generation. A Slice VAE encodes oriented surface samples into multi-axis slice latents and reconstructs them with a sparse volumetric decoder, while a Volumetric Anchor
Lattice coordinates directional slice streams through a shared 3D workspace. To preserve structural correctness, we introduce slice-level
topology supervision that matches persistence diagrams and aligns Betti transitions across neighboring slices. Experiments show that SILSA improves structural fidelity while substantially reducing generation cost. SILSA improves PSNR by $8.7\%$, coverage by $5.96$ absolute points, and Betti error by $9.2\%$ over the strongest baseline, while using $70.0\%$ fewer
tokens than the next-most compact baseline and over $98\%$ fewer
tokens than sparse or hierarchical tokenizers, effectively reducing training
memory by $40.4\%$ and inference time by $58.5\%$. Qualitative results further show improved preservation of thin structures, repeated components, and long-range connectivity.
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All authors Tianjiao Yu, Xinzhuo Li, Yifan Shen, Ying Shen, Kiet A. Nguyen, Adheesh Sunil Juvekar, Ismini Lourentzou
Machine Learning
TACO: Ternary Absolute-max Column-wise One-sparse Optimizer for LLM Fine-Tuning
Jichao Jiang, Cristian McGee, El Houcine Bergou et al. (+2 more)
Full-parameter fine-tuning of large
language models (LLMs) incurs substantial optimizer state
memory overhead, limiting the model sizes that fit on modern GPUs. Existing approaches either compress optimizer state, abandon first-order gradients, or change the update geometry while retaining dense state. The recently introduced
Muon optimizer reduces optimizer
memory through
matrix-valued updates. Still, its geometry differs from AdamW and can lead to performance degradation when fine-tuning AdamW-pretrained models. To reduce optimizer
memory without sacrificing accuracy or computational efficiency in LLM fine-tuning, we propose Ternary Absolute-max Column-wise One-sparse optimizer, or TACO, which follows
Muon's operator-norm steepest-descent view but takes the
geometric route further. TACO computes the exact steepest-descent direction under a dimension-normalized $1\to1$ operator norm by selecting the sign of the largest magnitude entry in each column of two-dimensional weight
matrices. This retains first-order gradients while making optimizer state
memory nearly negligible. Our practical TACO optimizer maintains only a small set of low precision gradient components per column, reducing persistent optimizer state by $174\times$ relative to AdamW8bit (from 27.7 GB to 0.16 GB) and peak training
memory by $2.9\times$ (from 80.6 GB to 27.5 GB) on OPT-13B, while achieving comparable accuracy and runtime. TACO further enables full-parameter fine-tuning of 30-32B-parameter models on a single 80 GB H100 GPU across multiple model families and tasks.
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All authors Jichao Jiang, Cristian McGee, El Houcine Bergou, HanQin Cai, Aritra Dutta
Machine Learning
FERPO: Forward Entropy-Regularized Policy Optimization
Sebastian Sanokowski, Alireza Sarmadi and Majid Khadiv
Several state-of-the-art methods for online reinforcement learning in continuous control improve policies using action gradients of a learned critic. However, critics are typically trained to predict returns, and accurate value predictions do not necessarily yield accurate action derivatives, potentially leading to unreliable policy updates. We propose Forward
Entropy-Regularized Policy Optimization (FERPO), an on-policy maximum
entropy reinforcement learning
algorithm that performs policy improvement using critic values without differentiating the critic with respect to actions. FERPO derives an optimal target action distribution from a policy-improvement objective regularized by
entropy and Kullback-Leibler (KL) divergence. We then fit the actor to this target by minimizing a forward-KL objective, estimated using self-normalized importance sampling (SNIS) with actions drawn from the rollout policy. By limiting the target distribution's deviation from the rollout policy, the KL regularization helps keep these importance weights well behaved. In contrast to reverse-KL objectives, which can favor a subset of the target distribution's modes, the forward-KL objective encourages coverage of multiple high-value modes and thereby promotes exploration. Experiments and ablations on MuJoCo Playground and ManiSkill show competitive performance and sample-efficiency gains. Computational
benchmarks also demonstrate faster actor updates than Relative
Entropy Pathwise Policy Optimization (REPPO).
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Machine Learning
Cost-augmented Schrödinger bridges on graphs are exactly solvable: a Feynman-Kac tilt replaces learned control
Akshay Balsubramani
The generalized Schrödinger bridge on a graph moves mass between two distributions while charging a cost for the states visited. It has been approached by learning the rates of a controlled continuous-time Markov chain, with a temporal-difference penalty that restores the cost. A state cost folds into the reference process as a Feynman-Kac tilt. The cost-augmented bridge is then a plain bridge against the tilted reference, and the penalty is unnecessary. The bridge is computed exactly by alternating two endpoint rescalings, each one sparse
matrix-exponential application; nothing is discretized in time or learned. The alternation converges at a rate set by the endpoint coupling alone. For a quadratic congestion cost on time-averaged occupancies, damped best response around the exact bridge is gradient descent on a strongly convex function, and its residual bounds its error. On a
protein-folding model, a free-energy cost lowers the expected barrier of the folding paths. On the learned approach's road network, roll-outs of the exact bridge match the target within sampling error, and on networks with millions of intersections its
memory grows linearly.
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Machine Learning · Cross-listed from cs.CL
Hui Ren, Zihan Li, Chang Liu et al. (+2 more)
Discrete
diffusion language models offer a compelling alternative to autoregressive generation for tasks demanding bidirectional
reasoning and global constraint satisfaction. Yet they share a structural bottleneck: when decoding in parallel, each
token is sampled independently from its marginal, severing the statistical dependencies among the
tokens decoded together. Continuous
diffusion language models avoid this by denoising a shared continuous state, but their denoiser sees only that state, so nothing ties it to a valid
token configuration until it is finally decoded. To address this, we propose Hierarchical Continuous
Diffusion Language Models (HC-DLM), which couple discrete
token generation with a continuous latent trajectory in a single, principled denoising process, whose training objective is derived from a variational bound on the
token likelihood. In contrast to recent methods that attach continuous context to a self-contained discrete chain, HC-DLM makes the latent the only persistent generative state:
tokens are read out from it at every step and feed back as a scaffold for the next latent update. On structured
reasoning (Sudoku), mathematical planning (Countdown) and
language modeling (LM1B), HC-DLM improves over discrete and continuous
diffusion baselines at matched model size, in puzzle accuracy on Sudoku and Countdown and in generative perplexity on LM1B. Project page: https://hc-dlm.github.io/.
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All authors Hui Ren, Zihan Li, Chang Liu, Huidong Liu, Alexander Schwing
Machine Learning
The Missing Primitive: Diagnosing and Repairing Mathematical Reasoning in Large Language Models
Shuo Xing, Zilin Dai, Chengyuan Qian et al. (+7 more)
While Large
Language Models (LLMs) have demonstrated striking capabilities on frontier mathematical problems, it remains unclear whether they possess the structural mathematical understanding underlying their solutions. In this paper, we take a first step toward systematically studying mathematical understanding in LLMs, from diagnosing its distinct capabilities to leveraging these findings to improve post-training. First, we introduce the notion of Mathematical Primitive to probe structural mathematical understanding and propose \hlei{}, a novel
benchmark that evaluates mathematical
reasoning along four distinct dimensions: Discovery, Generation, Digestion, and Execution. Second, our systematic diagnosis shows that solution accuracy masks distinct capability profiles, primitives unlock substantial latent execution capacity, and Discovery is the dominant bottleneck in mathematical
reasoning. Our post-training analysis further shows that discovery-limited failures are particularly amenable to repair. Finally, building on these findings, we introduce \abs{}, a primitive-privileged self-
distillation framework that selectively transfers primitive-guided
reasoning into the student model. Extensive experiments demonstrate that \abs{} consistently improves mathematical
reasoning over baselines across model scales and challenging
benchmarks.
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All authors Shuo Xing, Zilin Dai, Chengyuan Qian, Fangzhou Lin, Wenjing Chen, Ping He, Pan Lu, Alvaro Velasquez, Mohit Bansal, Zhengzhong Tu
Machine Learning
Trust the Direction, Search the Step: Zero-and-First-Order Methods for LLM Fine-Tuning
Cristian McGee, El Houcine Bergou and Aritra Dutta
Step-size selection remains a central challenge in large-scale neural network optimization; conservative steps slow convergence, while aggressive steps can destabilize it. We combine Zero-and-First-Order optimization~(ZFO) and propose a lightweight framework that decouples direction selection from step-size. ZFO uses a trusted first-order optimizer to determine the direction and performs zeroth-order evaluations only along this one-dimensional subspace to choose how far to move. Using the current {gradient information} and two additional objective function evaluations, ZFO instances construct a local model of the objective function along the proposed direction and select a
curvature-aware step within a bounded search interval. This yields an adaptive step-selection mechanism that costs less than a full line search. We provide theoretical guarantees to show that shared-sample evaluations produce reliable finite-difference
curvature estimates, that the induced local model selects a near-optimal step along the search interval, and that ZFO converges to a neighborhood of a stationary point. Across the evaluated settings,
language models and
datasets, ZFO frequently improves optimization and final performance relative to fixed-step first-order baselines, with the magnitude and preferred local model depending on the objective. Our code is publicly available at: https://github.com/nizswan/Zeroth-First-Order-Framework.
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Machine Learning
Generative modeling of intrinsically disordered protein regions by reinforcing sparse autoencoder features
Jason X. Liu, Sebastian Ibarraran, Frank Hu et al. (+7 more)
Intrinsically disordered
protein regions (IDRs) play central roles in cellular processes such as transcriptional regulation, signal transduction, and subcellular localization, yet their functional design remains challenging. Structure-based design methods do not readily apply to IDRs, and existing
protein language models are trained on full-length
protein sequences, thus learning a prior that is biased towards folded domains. Here, we present IDiom, an autoregressive
protein language model trained on IDiom-DB, a
dataset of 54 million predicted IDRs curated from the AlphaFold Database. IDiom generates diverse sequences that recapitulate the composition, patterning, motifs, and predicted disorder of natural IDRs. To control function-associated sequence patterns, we also introduce reinforcement learning with sparse autoencoder features (RL-SAE), a post-training method that rewards the generation of sequences that activate specified feature sets. Across eight IDR design tasks, RL-SAE sequences activate, on average, 90% of 30 targeted features, compared to 24% for activation steering. We demonstrate that RL-SAE improves the predicted subcellular localization and transcriptional activity of generated IDRs compared to steering and supervised fine-tuning, and enables features associated with distinct biological functions to be combined within individual sequences. Thus, IDiom and RL-SAE enable interpretable and composable IDR design through explicit control of function-associated sequence features. More broadly, RL-SAE could extend to other
protein design settings where interpretable features provide useful design targets. Code is available at https://github.com/rotskoff-group/idiom.
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All authors Jason X. Liu, Sebastian Ibarraran, Frank Hu, Soojung Yang, Xinyu A. Feng, Abigail Park, Anagha Aneesh, Lacramioara Bintu, Alexander R. Dunn, Grant M. Rotskoff
Machine Learning
Higher-Order Molecular Grammars for Generative and Foundation Models in Chemistry
Yiming Huang, Yujie Zeng, Vijay Prakash Dwivedi et al. (+4 more)
Molecular learning models are strongly shaped by their underlying representations. Yet standard sequential and graph formalisms struggle to explicitly encode higher-order
topology, such as ring systems and recurring motifs. Existing higher-order representations can capture these structures directly, but they are often computationally demanding and difficult to decode into valid molecules. Here, we introduce Higher-order Grammar Representation (HGR), a principled,
topology-aware framework that lifts molecules to combinatorial complexes and parses each complex into a compact sequence of production rules under a context-free higher-order grammar. By serialising higher-order
topology into rule sequences, HGR makes these structures directly compatible with standard sequence models, avoiding the computational overhead of explicit higher-order encodings while preserving topological expressiveness. To reduce
benchmark bias towards simple ring systems, we construct RingDiv, a ring-enriched
benchmark containing 1.18 million molecules, including the curated RingDiv300k subset, and introduce the ring diversity index (RDI) to quantify ring-system coverage. In molecular generation, HGR-based models uniquely combine 100% validity by construction with leading distributional
alignment, ranking first in FCD on all five generation
benchmarks. In representation learning, HGR-FM achieves the highest mean AUC across seven MoleculeNet
benchmarks under both transfer protocols, improving on the strongest baseline by 8.3 and 3.3 AUC points under probing and full fine-tuning, respectively. Collectively, these results establish HGR as an efficient higher-order representation for molecular generation and transferable representation learning.
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All authors Yiming Huang, Yujie Zeng, Vijay Prakash Dwivedi, Simone Foti, Jianmin Wang, Jure Leskovec, Tolga Birdal
Machine Learning
Decoding Looped Transformers Better for (Almost) Free
Weihao Liu, Huangjie Zheng, Tianrong Chen et al. (+5 more)
Looped
Transformers achieve parameter efficiency by repeatedly executing a shared block across recurrent loops. Each loop yields an intermediate representation decodable for the same next
token, yet standard decoding discards earlier states. Because earlier loops embody less computation, recurrence inherently supplies aligned weak-and-strong prediction pairs without auxiliary models or external training. We introduce LoopCD, a training-free contrastive decoding framework that guides
token selection by contrasting the final prediction with an earlier recurrent pass, operating either in logit space with one extra output pass (LoopCD-Logits) or in hidden-state space with zero output overhead (LoopCD-Hidden). Across four looped
Transformer families, LoopCD delivers substantial, consistent gains at full recurrent depth: LoopCD-Logits raises Ouro-2.6B-Thinking's AIME 2024 pass@1 from 61.88% to 73.33%, while LoopCD-Hidden lifts Huginn's HumanEval pass@1 from 22.56% to 31.71%. Crucially, these performance gains enable halving the number of recurrent loops while still matching or exceeding full-depth unguided baselines, reducing forward FLOPs by 22.5% to 48.2%. By transforming intermediate recurrent states into effective guidance signals, LoopCD achieves superior decoding quality while substantially reducing inference compute.
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All authors Weihao Liu, Huangjie Zheng, Tianrong Chen, Rohit Dilip, Richard He Bai, Yizhu Jiao, Yuyang Wang, Ruixiang Zhang
Machine Learning
SoftServe: A Scalable Quasi-Newton Method for Deep Learning
Joohwan Ko, Tetiana Parshakova, Diana Cai et al. (+1 more)
Quasi-Newton (QN) methods have long been among the most effective methods for large-scale unconstrained convex optimization. Two obstacles have limited their use in deep learning: non-convexity and enormous parameter sizes. We introduce SoftServe, a family of QN methods designed to overcome these obstacles without line searches or ad hoc
curvature corrections. SoftServe derives positivedefinite
curvature estimates from the variational objective of Berglund et al. (2025), even in the presence of negative
curvature. We develop diagonal and Kroneckerfactored variants that preserve positive definiteness by construction and scale to massive neural networks. Finally, SoftServe relies on the stable coupled Newton-Schulz iteration for the required
matrix operations, replacing costly
matrix decompositions with GPU-friendly
matrix multiplications. SoftServe excels on problems that are severely ill-conditioned, including tasks such as recurrent networks, deep autoencoders, physics-informed neural networks, and a 136M-parameter physics-informed
diffusion model, often achieving lower losses than established baselines including Adam,
Muon, and SOAP.
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All authors Joohwan Ko, Tetiana Parshakova, Diana Cai, Robert M. Gower
Machine Learning
From Gradients to Capabilities: Understanding Multi-Teacher On-Policy Distillation
Siqi Zhu, Suozhi Huang, Kaixuan Zhang et al. (+4 more)
Multi-teacher on-policy
distillation (MOPD) aims to combine the strengths of RL-trained teachers in a single student, but how teacher signals affect parameter changes remains underexplored. We study Qwen3-1.7B with four domain teachers trained with RL from the same initialization as the student, comparing gradients, optimizer updates, and task learning curves, with additional SmolLM3-3B diagnostics. We find that several factors influence teacher signals. First, loss averaging implicitly weights responses:
token averaging favors longer responses, and equalizing domain contributions retains this weighting within domains. Second, Adam's first moment reduces differences in parameter updates: the cosine similarity is 0.83 between teachers and 0.96 between averaging rules, despite differences in raw gradients. Third, BF16 rounding hides small changes: about 97% of FP32 master weights differ from initialization, but only 7–11% of BF16 weights do. Finally, the top-64 intersection KL gradient closely matches Qwen's full-vocabulary gradient, but the effect on task performance depends on averaging: mathematics accuracy is 2.6 points higher than with sampled-
token policy-gradient (PG) under response averaging and 2.1 points lower under global
token averaging.
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All authors Siqi Zhu, Suozhi Huang, Kaixuan Zhang, Yuheng Yang, Zhanyang Jin, Yihang Sun, Jiaxuan You
Machine Learning
Effective Resistance and Graph Neural Network Reliability in Tissue-Specific Interactomes
Jianru Shen
Protein function annotation needs to know which predictions to distrust, not only what a model predicts. We ask whether tissue-specific interaction structure carries that information. Our candidate signal is effective resistance, used previously to relieve over-squashing by rewiring. Across 24 tissue-specific interactomes it is dominated by inverse degree, and the degeneration deepens as the co-expression filtered network grows, with a Spearman correlation of -0.955. The residual departure from that limit exceeds degree-preserving null graphs in all 24 networks. Controlling for predictive
entropy, degree, annotation cardinality, local structure and feature-only difficulty, the residual explains additional per-node loss in 19 of 24 held-out networks once a permutation floor is subtracted, at every depth, and the effect strengthens monotonically with depth. The increment reaches 0.37% of the variance the controls leave unexplained, 5.6 times a permutation floor, against 1.5 times when the model is retrained in a degree-preserving null world. Selective prediction improves negligibly. The signal is reproducible; degree degeneration bounds it.
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Machine Learning
Every Ablation Is a Dose: Counterweights and the Semblance of Self-Repair
Areeb Ahmad, Pratinav Seth and Vinay Kumar Sankarapu
Ablate a component of a
language model, and other components often appear to adjust and compensate. This phenomenon, termed self-repair, has been observed repeatedly, but its mechanism remains unclear. The most systematic study to date concluded that self-repair is noisy and unlikely to have a single explanation. We argue that it has one: a gain already present before any ablation. Any intervention on a causally important component can be viewed as a point on a coordinate axis $\lambda$, the signed strength of a counterfactual contrast. Hence, conventional ablation methods are uncalibrated points on this axis. We show that the causal repair response for a fine-grained unit $r$ is governed by an affine law, $E_r(\lambda)=\mathrm{own}_r+\gamma_r\lambda$. The slope $\gamma_r$ is a fixed coefficient that consistently influences the model, with or without ablation, and its sign determines whether the unit counteracts or reinforces the removed signal. On a factual-verdict task across four models from distinct families (Gemma, Qwen, LLaMA, and Mistral), we identify components including MLP
neurons, OV
neurons, and singular directions that follow this affine law, 68 of 81 downstream directions in all. Moreover, we can anticipate the magnitude of $\gamma_r$ from the fixed weights. On the IOI
circuit of GPT-2 Small, seven of the ten heads the intervention can reach follow the law, and all seven are counterweights. From this perspective, what may appear as self-repair is a counterweight performing its usual operation when the contrastive signal emerges at the core.
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Machine Learning
When Do Intrinsic Rewards Lead to Exploration?
Scott W. Viteri, Laura Gomezjurado Gonzalez and Clark Barrett
Intrinsic rewards are designed to guide exploration in reinforcement learning by assigning value to an
agent's experience, for example through prediction error or learning progress. However, maximizing these rewards need not produce the most informative experience available. We propose a formal criterion for exploration that compares policies by the counterfactual information they acquire: how well their histories can substitute for experience under alternative policies. We construct a single, simple environment in which specified count-based, prediction-error, empowerment, and information-gain objectives have maximizing policies that are Pareto-suboptimal at acquiring counterfactual information. We explain these failures and establish conditions under which existing intrinsic rewards successfully encourage optimal exploration. We also construct an objective that assigns a higher value whenever exploration strictly improves under our criterion.
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Machine Learning
Muon meets Tamed Langevin: Momentum Preconditioning beyond Convex and gradient-Lipschitz Potentials
Nikolaos Makras and Sotirios Sabanis
We consider the problem of sampling from Gibbs distributions on
matrix spaces whose potential energies are neither convex nor globally gradient-Lipschitz. We introduce a family of non-quadratic kinetic energies that lead to a new underdamped Langevin system with momentum preconditioning, in which the gradient of the kinetic energy acts as a smooth spectral taming of the momentum. We prove that, under these relaxed assumptions on the potential, the resulting dynamics leaves the target Gibbs measure invariant, and we establish exponential convergence to
equilibrium in a weighted total variation distance. Finally, we show that the corresponding Euler-Maruyama discretization admits moment bounds that are uniform in time, without any modification of the potential gradient, which ensures the stability of the resulting sampling
algorithm.
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Machine Learning · Cross-listed from cs.CL
From Knowledge Access to Source Learning: Developing Source-Specific Competence
Lucheng Fu, Kejing Xia, Yiyang Wang et al. (+10 more)
Large
language model (LLM)
agents increasingly rely on persistent external sources to solve sequences of knowledge-intensive tasks. Existing methods improve how source content is accessed and organized, while
agent-
memory systems preserve reusable knowledge from prior interactions, but repeated use of the same source is still largely treated as repeated access rather than an opportunity to progressively improve understanding of that source. We study source learning: developing reusable source-specific competence over a persistent authoritative source. We represent this competence with a persistent source model that captures reusable understanding of the source, including how its knowledge is structured, interpreted, and applied. To construct and progressively refine such models, we propose SourceLearn, which combines two complementary learning mechanisms. Self-Directed Source Learning identifies what remains incompletely understood and adaptively revisits the source, while Task-Guided Source Learning uses downstream experience to reveal local representational gaps and recurring needs in how source knowledge should be organized. In both cases, learning signals determine what should be reconsidered, while persistent updates are reconstructed from the authoritative source. Across five
benchmarks and three LLM backends, SourceLearn achieves the best performance in 13 of 15 settings, with gains of up to 22.6 points over Hybrid RAG and substantial overall improvements over static source representations and experience-based
memory baselines.
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All authors Lucheng Fu, Kejing Xia, Yiyang Wang, Yiqiao Jin, Jinjin He, Xiyuan Yang, Haoxin Liu, Ye Yu, Haibo Jin, Yijia Xiao, Wenke Lee, B. Aditya Prakash, Haohan Wang
Machine Learning
Faynt: Scaling and Optimizing Policies for Competitive Melee
Ali Janati, Nikita Kuzmin, Rohit Swamy et al. (+1 more)
We introduce Faynt, a family of 10M- and 75M-parameter
Transformer policies for Super Smash Bros. Melee, each controlling all 26 characters with a single checkpoint. After reinforcement learning (RL), the 10M wins 240 of 244 same-character games (98.4%) against fourteen specialist and multi-character releases on their supported rosters, with a winning record against every release. These opponents retain 21- or 24-frame action delays; Faynt uses no added delay, and we have not isolated the effect of this difference. In a separate evaluation against a privately supplied zero-delay Slippi-AI model, the 10M wins all 68 games across two conditioning settings. We study architecture, optimization, scaling, and hyperparameter transfer to guide pretraining on approximately 840,000 human replays. Post-training combines rank- and outcome-based curricula, 75M-to-10M
distillation, and RL restricted to Fox mirror matches. On the initial 152-game
benchmark, the supervised 10M wins 69.7% of games, compared with 45.4% for the pretrained 75M, despite higher overall held-out controller-prediction loss. The weighted validation loss used for supervised checkpoint selection agrees with the win-rate ordering of all four pretrained and supervised policies. After supervised post-training, both models take less damage per minute, build larger early leads, and win more often after losing the first life. Optimized inference on recorded game states averages 5.2 ms per decision for the 10M and 8.7 ms for the 75M on an NVIDIA T4, excluding emulator execution and communication. We open-source the weights, both
benchmark suites, and a platform for automated model tournaments.
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All authors Ali Janati, Nikita Kuzmin, Rohit Swamy, Charles Niu
Machine Learning
Finetuning with Sampling: SFT Learns Better Than You Think
Aayush Karan, Sitan Chen and Yilun Du
Introducing new capabilities to frontier models has long been the goal of posttraining, which predominantly employs supervised finetuning (SFT) and reinforcement learning (RL) to this end. Conventional wisdom dictates that RL enables strong generalization on new tasks without losing existing capabilities, while SFT is prone to weak generalization and catastrophic forgetting. At the same time, SFT can learn from off-policy expert data, whereas RL must rely on a model's ability to find successful trajectories with repeated sampling. In our work, we seek to leverage the strength of on-policy learning while utilizing the privileged information contained in off-policy data. However, rather than modifying the learning objective to accommodate this data, we instead tailor the data distribution to better suit the learner. We introduce a Markov chain Monte Carlo (MCMC) sampling
algorithm that progressively transforms off-policy traces to be more on-policy given a reference model for finetuning. Across tasks like scientific skill acquisition, mathematical
reasoning, and open-ended expertise, our sampling
algorithm enables SFT to rival prevailing posttraining techniques, often generalizing better and forgetting less than strong on-policy baselines. In addition, the resulting finetuned models exhibit strong distributional performance and are capable of learning beyond sharpening the base model distribution. At a higher level, our approach presents sampling as a model-native operator that shapes data for learnability, offering broader utility as a general-purpose primitive throughout the posttraining stack.
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Machine Learning
Linear Programming Representations and Strongly Polynomial Algorithms for Robust Markov Decision Processes
Han Zhong and Yinyu Ye
We study linear programming (LP) representations and strongly
polynomial algorithms for robust Markov decision processes (RMDPs) with rational polyhedral state-action rectangular uncertainty in rewards and transitions. By encoding a finite sequence of robust policy-iteration steps, we construct a single LP whose optimal solutions recover the robust optimal value and all optimal stationary randomized policies. At fixed discount, the LP has
polynomial dimension and encoding length and can be constructed in strongly
polynomial time. We also develop a general complexity analysis of robust policy iteration that combines the cost of minimizing over uncertainty sets with the number of iterations needed to evaluate a policy. For a fixed discount factor, we use this analysis to improve the known complexity bounds for $\ell_1$ and $\ell_\infty$ RMDPs and establish new strongly
polynomial bounds for general interval, weighted $\ell_1$, and Wasserstein RMDPs, as well as turn-based
stochastic games with these uncertainty sets.
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Machine Learning · Cross-listed from math.ST
Sample complexity bounds for categorical Markov random fields via Discrete Diffusions
Shivam Kumar and Nabarun Deb
Many applications in statistics, economics, and physics require sampling from high-dimensional categorical distributions with local dependence structures. Examples include finite
memory language models, Ising and Potts systems in statistical physics and
protein folding, etc. In modern machine learning, discrete
diffusions have emerged as a flexible approach for sampling such data, with strong empirical performance. Motivated by this, we develop learning methods with end-to-end sample complexity bounds for discrete
diffusion with uniform noising under local dependence, which we model through low order Markov random fields (MRFs). Our main technical insight is a new pinning decomposition of the discrete score. It shows that unlike in continuous
diffusions, the score decomposes into components where the dependence on time separates multiplicatively from the dependence on the target. Building on this decomposition, we propose a weight-sharing neural score learner and combine it with $\tau$-leaping to obtain an end-to-end sampling procedure. Rather than treating score-learning error as a black-box input, as is common in existing sampling analyses, we study the score learning error from finite data and derive optimal sampling guarantees with explicit dependence on the vocabulary size, the interaction order of the MRF, and the sample size. Moreover, our strategy trains a single score network across uniform noise levels while leaving the sampling discretization to be chosen at inference-time. This allows the same trained model to trade accuracy for computational cost as inference-time budgets vary. Numerical experiments on Potts, Ising, and tree-structured models show that weight-sharing score networks outperform fully connected ones for sampling long sequences.
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Machine Learning
Local Support Learning
Assaf Ben-Kish, Akarsh Kumar, James Glass et al. (+1 more)
We explore catastrophic forgetting in the context of large pre-trained models. By considering forgetting as a
geometric problem in the input space of each weight
matrix, we uncover a natural retention objective under which updates produced by gradient-based optimizers are suboptimal. Following this observation, we propose Local Support Learning (LSL), a general-purpose framework that augments gradient-based training for retention of prior capabilities without access to prior data. During a new learning phase, LSL pairs two components with distinct roles: a standard weight adapter, trained as usual to minimize the loss, and a gating function that enables the adapter only on input activations from its own training distribution, making the update local to that distribution. The key challenge is that this gate must route data from all learning phases while training only on data from the current one. We address this with a gate based on a Gaussian Mixture Model (GMM), whose likelihood decays rapidly away from its training data, giving it a natural tendency to stay closed on data from prior phases. We show that this post-training approach can resolve forgetting in LLMs of up to 7 billion parameters, retaining both pretrained and finetuned capabilities across multiple training phases, while being efficient in
memory and compute, robust to hyperparameter choice, and showing scaling potential.
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All authors Assaf Ben-Kish, Akarsh Kumar, James Glass, Raja Giryes
Machine Learning · Cross-listed from cs.CV
Where-OPD: Spatially Guided On-Policy Self-Distillation of MLLMs with Synthetic Scenes
Sophia Sirko-Galouchenko, Monika Wysoczanska, Andrei Bursuc et al. (+2 more)
On-policy self-
distillation has recently emerged as an effective approach for improving
language-model
reasoning by supervising students with a frozen or EMA version of themselves that receives privileged information. Its application to
multimodal large
language models (MLLMs), however, remains largely unexplored. Recent approaches use privileged visual information, such as image crops corresponding to a question, to improve fine-grained perception, but their gains are confined to tasks that benefit from such visual zooming and require either human-annotated grounding data or external teacher models. We introduce a different form of on-policy self-
distillation for MLLMs that provides the teacher with textual, spatially grounded guidance identifying the visual elements relevant to a query. We use procedurally generated scenes with automatically available object identities and spatial coordinates, enabling scalable and annotation-free post-training. The teacher uses this spatial guidance to locate and integrate evidence from multiple relevant image regions, while the student learns to reproduce the resulting behavior from the image and question alone. Our approach consistently improves performance on counting, document and chart understanding
benchmarks across multiple models. Importantly, although post-training uses only synthetic scenes, the resulting improvements transfer to real-world perception
benchmarks, yielding a 3.23-point gain in average performance across CVBench, V*, ZoomBench, BLINK, HR-Bench, and MME-RealWorld. These results show that spatially grounded privileged information can induce broader perceptual capabilities through on-policy self-
distillation, enabling substantial synthetic-to-real transfer beyond the task and data distribution used for post-training. Project page: https://github.com/sirkosophia/Where-OPD
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All authors Sophia Sirko-Galouchenko, Monika Wysoczanska, Andrei Bursuc, Nicolas Thome, Spyros Gidaris
Machine Learning
Are We Recovering Mechanisms? Objective-Level Recovery Gaps in Mechanistic Interpretability
Chuqin Geng, Li Zhang, Haolin Ye et al. (+3 more)
Mechanistic interpretability aims to recover the internal computations responsible for model behavior. Progress in automated
circuit discovery is often framed as a search problem: better attribution or optimization should identify better mechanisms. This assumes that the evaluation objective can recognize a better
circuit once it is found. Yet standard intervention-based evaluation replaces signals outside a
circuit to isolate its effect, changing the computational environment in which the retained components operate. We call this change context distortion. This raises the question of whether faithfulness rewards recovery of model behavior or compatibility with the altered context. We show that intervention-based faithfulness can prefer an equally sized
circuit that reproduces the model's behavior less well. We call this reversal misranking, an objective-level recovery gap. To isolate evaluation from discovery, we construct equally sized candidates through controlled edits to human-identified
circuits in pretrained
language models, including IOI and Greater-Than, and
benchmark circuits with known mechanisms. We find misranking even without a discovery
algorithm. Misranking also occurs in real automated
circuit-discovery settings. Among outputs of EAP, EAP-IG, ACDC, and Edge-SP, KL faithfulness under ordinary resampling prefers the behaviorally worse candidate in 13.2%-24.4% of candidate pairs across these methods on four pretrained-
language-model tasks. Finally, restoring selected intact-model signals reverses 96 of 100 selected persistent misrankings, demonstrating that context distortion contributes to these failures. In light of these findings, we call for rethinking both how
circuit discovery is performed and how its results are evaluated.
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All authors Chuqin Geng, Li Zhang, Haolin Ye, Mark Zhang, Luke Zhang, Xujie Si