Machine Learning
Adaptive Multi-Expert Graph Transformer for Interpretable EEG-Based Diagnostics
Maryam Rahimimovassagh, Md Elias Hossain, Ivan Garibay et al. (+1 more)
Electroencephalographic (
EEG) abnormalities arise from dynamic changes in neural synchrony across spatial and temporal scales, yet many computational approaches reduce these dynamics to static features. We present a Spatial Multi-Expert Graph
Transformer that models each
EEG recording as a sequence of dynamic functional connectivity graphs. Time-resolved connectivity is estimated using the weighted Phase Lag Index (wPLI), and hierarchical graph encoding aggregates information from electrode to regional and global levels. A multi-expert
transformer architecture enables subtype-aware
reasoning, with a gating mechanism adaptively fusing expert outputs for global abnormality prediction. Experiments on the TUAB
dataset show competitive abnormal
EEG detection performance and demonstrate the potential of dynamic graph modeling with adaptive expert fusion for interpretable, subtype-aware spatial–temporal analysis.
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All authors Maryam Rahimimovassagh, Md Elias Hossain, Ivan Garibay, Niloofar Yousefi
Machine Learning · Cross-listed from q-bio.GN
Making Single-Cell Data Distillation Auditable: Traceable Real-Cell Coresets via Discrete Min–Max Selection
Yaodi Luo, Peize He, Lingbei Meng et al. (+4 more)
Large single-
cell datasets are expensive to store, curate, and repeatedly reuse for model training. Data
distillation can reduce this burden by building smaller training sets. However, many existing methods rely on synthetic
cells. These synthetic
cells do not retain direct correspondence with assayed
cells and genes. This limits source-level inspection and biological traceability. Moreover, real-
cell expression
matrices are often sparse and noisy. In light of these challenges, we propose Minmax-CF, a label-aware characteristic-function selector for traceable single-
cell data
distillation. Minmax-CF formulates compression as a discrete min–max selection problem over characteristic-function directions. It uses
entropy-regularized maximization to emphasize the least preserved directions. Greedy minimization ranks
cells and genes by how much they reduce the resulting weighted error. The method alternates
cell and gene selection under explicit axis-specific budgets. Across five coarse-lineage
benchmarks and five compression budgets, Minmax-CF retains 95.3% of the Full-reference macro-F1 on average, with gaps that exceed one per-seed standard deviation. It also retains exact source-
cell indices and original gene symbols. Compared with size-matched synthetic PCA-Centroid and Distribution Matching (DM) baselines, Minmax-CF achieves higher coarse-lineage macro-F1 in 24 of 25 comparisons against each baseline. It exceeds their average performance by 10.4% and 17.4%, respectively. Retained
cells can also be projected onto independently computed
embeddings for direct biological interpretation.
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All authors Yaodi Luo, Peize He, Lingbei Meng, Bowen Han, Zheng Lu, Jianqing Zhu, Lian Zhang
Machine Learning · Cross-listed from cond-mat.mtrl-sci
GQD-AdsNet: Graph Neural Networks Unlock Rapid Exploration of Transition Metal Adsorption on Graphene Quantum Dots
Lara Goncebat, Rodrigo Echeveste, Matías Gerard et al. (+3 more)
In recent years, interest in single-atom catalysts supported on carbon-based structures has grown considerably due to their high catalytic activity and efficient uses of metal atoms. However, the design and characterization of these materials through first-principles calculations are computationally expensive, limiting the exploration of a large number of possible configurations. Here, we developed a framework based on graph neural networks (GNNs) to predict the adsorption energies of transition metals on
graphene quantum dots (GQDs). The model was trained using data obtained from density functional theory calculations and achieved an $R^2$ of 0.906 with an MAE of 0.101 eV, while reducing computational cost by roughly six orders of magnitude relative to DFT. This methodology provides an efficient tool for the accelerated screening and rational design of new catalysts based on carbon nanostructures.
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All authors Lara Goncebat, Rodrigo Echeveste, Matías Gerard, Frederik Tielens, Gustavo Belletti, Paola Quaino
Machine Learning
Planning as Emergent Behavior in Reinforcement Learning with Relational Hidden States
Armin Sommer
Reinforcement learning is conventionally divided into model-based and model-free methods. In this taxonomy, model-based methods perform lookahead planning over a learned world model, whereas model-free methods learn a reactive state-action mapping. Recent work, however, has shown that planning can emerge from model-free reinforcement learning alone. The conditions under which this behavior emerges from a pure reward-maximization objective have so far remained unclear. In this paper, we present evidence that, in the observed cases, the hidden-state structure of the neural architecture is the deciding factor. We find that a network of relational hidden states, each anchored to an environment state and exchanging messages along learned relations, acquires a planning mechanism. These hidden states recover the environment's transition structure in their learned relations, and improve the policy at decision time by planning over the learned graph. In a matched control
agent that must additionally discover which
cells represent which states, no such binding arises, and no planning follows from it. We argue that this explains the observed phenomenon of emergent planning in model-free reinforcement learning and raises the question of how common such emergent planning might be more generally. Finally, we hypothesize that the discovered mechanism could describe how planning emerges from pure reward maximization in the human
brain through a neural architectural prior.
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Machine Learning
On the Diverse Dynamical Behaviors Arising in Deep Linear Transformers
Sixu Li, Thomas Jacob Maranzatto, Jan Peszek et al. (+5 more)
We study the inference-time behavior of deep linear encoder-only
transformers through the lens of interacting particle systems. In this perspective,
tokens are modeled as particles that interact dynamically through successive linear self-
attention layers. We show that in
embedding dimension two, for any key, query, and value
matrices, the dynamics can be reformulated as a generalized Kuramoto-type model with pure second-harmonic coupling. This formulation is amenable to Watanabe–Strogatz theory which reveals the dynamics are intrinsically low-dimensional regardless of the parameter
matrices. For a class of
token initializations associated with the Ott–Antonsen (OA)
manifold, we show that the parameter
matrices induce a diverse variety of long-time behaviors in linear
transformers, including clustering, oscillations, and bifurcations. The oscillations and bifurcations are characterized by uncovering a hidden
Hamiltonian structure in the dynamics. By establishing a structural stability result, we further show that dynamics initialized near the OA
manifold exhibit the same long-time behavior as those initialized exactly on the
manifold. Motivated by our theory in dimension two, we conduct numerical experiments for analogous parameter regimes in higher-dimensional
transformers. Our numerical experiments suggest that the long-time behaviors characterized in our theoretical results persist in higher dimensions.
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All authors Sixu Li, Thomas Jacob Maranzatto, Jan Peszek, Trevor Teolis, Semih Akkoc, Konstantin Riedl, Sennur Ulukus, Nicolás García Trillos
Machine Learning
Conditioned Direct Feedback Alignment via Activity and Error Geometry
Houman Safaai, Varun Reddy and Bernardo L. Sabatini
Direct feedback
alignment (DFA) trains hidden layers with fixed random projections of the output error. Even when this feedback provides useful credit, unequal scales across activity or error directions can distort the local update. We study conditioned DFA (nDFA), a family that adapts established inverse-moment preconditioning to either side of this update. An aligned linear analysis describes how activity conditioning changes spectral learning rates and early-stopping risk. Synthetic experiments show gains from both stabilization and changes in update direction. Confirmatory CIFAR-10 experiments show that activity conditioning, including its FOOF formulation, improves tuned DFA at matched measured training time. Controls support a role for centered correlations beyond the tested mean and diagonal alternatives, while early-only conditioning retains most of the benefit with less training work. Conditioning also benefits backpropagation, and timing interventions do not establish a mechanism specific to random feedback. Error conditioning improves short-budget models and changes update directions, but its small additional improvement under stable training does not survive correction for multiple comparisons. Predicted benefits on image-background
benchmarks are not confirmed. These findings establish practical benefits and important limits of conditioning learning with fixed random feedback.
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Machine Learning
AMICA-Python: Adaptive Mixture Independent Component Analysis with Anderson Acceleration
Scott Huberty and Christian O'Reilly
Adaptive Mixture Independent Component Analysis (AMICA) is widely used in
EEG research and has long been associated with strong empirical performance for blind source separation. Despite its impact, practical use has historically depended on a single Fortran implementation, accessed via the EEGLAB toolbox for MATLAB, limiting its accessibility for analytical pipelines not designed within the MATLAB ecosystem. Here we present AMICA-Python, a Python implementation of the AMICA
algorithm, with a scikit-learn-conformant API designed for integration with existing scientific Python pipelines. The implementation follows the reference
algorithm closely while adopting modern software engineering practices and an interface familiar to Python users. Additionally, we introduce an optional Anderson acceleration scheme that can dramatically reduce the time to convergence for this relatively slow
algorithm. To evaluate numerical agreement and practical performance, we benchmarked AMICA-Python against the reference Fortran implementation on 14 open
EEG recordings. After averaging 3 runs of each implementation on all 14 recordings, AMICA-Python closely matched the reference, with a median final normalized log-likelihoods of 11.572 for both the Fortran and Python implementations, and a negligible median relative absolute difference of only $1.07\times10^{-8}$ when normalized by the absolute Fortran value. Runtime was also competitive. Relative to the reference implementation, AMICA-Python was 17.7% faster, while the Anderson-accelerated variant was 34.1% faster. AMICA-Python reproduces the reference implementation to high numerical precision with competitive runtime, while making AMICA available through a more accessible and extensible Python interface.
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Machine Learning · Cross-listed from cs.AI
Attacking Graph Foundation Models Through Their Shared Representation
Pankaj Kumar and Subhankar Mishra
A graph foundation model generalizes across graph domains by mapping every input into one shared representation before any task
reasoning. We call this map the
alignment layer, the component that separates a graph foundation model from a graph neural network, and we show it is a distinct attack surface that prior work has not studied. We attack it at inference time, with no access to training, on six public models spanning spectral tokenizers, text
embedding spaces, and a discrete codebook. A directed representation-space perturbation collapses every model, but at a budget comparable to the representation norm a plain graph network also needs, with one exception: OpenGraph, whose spectral tokenizer collapses at a fifth of that budget, an
alignment-specific fragility a plain network does not share and which a same-representation control traces to the tokenizer rather than the decoder. A realizable input-space attack that edits edges, features, or text removes at least half the correct predictions on three of the six models at peak. How much of this fragility an input-access attacker realizes tracks how directly the decoder reads the representation, and not the clean accuracy a task leaves; we measure this carrier gain structurally from the decoder's local Lipschitz sensitivity, and report clean-accuracy headroom as a within-model ordering heuristic that does not survive on realizable attacks.
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Machine Learning
Robust Multi-View Classification under Noisy Supervision via Global Anchor Consensus
Yuliang Yang, Hongzhe Zhang and Huiru Wang
In recent years, multi-view learning has attracted increasing
attention, as it integrates the complementary information of heterogeneous views. Most existing multi-view classification methods rely on accurate annotations to guarantee performance. However, noisy labels are ubiquitous in practice due to imperfect annotation, and the refinement signals that existing methods derive from models trained on such noisy supervision can gradually lose their reliability. To deal with this problem, we propose a novel Global Anchor-based Label
Auditing method (GALA) for multi-view classification to resist the negative impact of noisy labels. Specifically, we construct a global anchor for each class in every view, which aggregates the samples of the whole class and thus offers a stable reference insensitive to individual predictions. Then, each view measures how close an instance is to the anchor of its observed label relative to the nearest competing anchor, and the per-view evaluations are fused with the classifier confidence into a cross-view audit score. Based on the audit scores, suspicious samples are assigned small weights, and an adaptive correction strategy rewrites a label only when the anchor-based candidate agrees with the classifier prediction. Finally, the corrected labels in turn refine the anchors and supervise noise-robust representation learning. Extensive experiments on six
datasets demonstrate that GALA outperforms eight state-of-the-art methods, especially under high noise rates.
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Machine Learning · Cross-listed from stat.ML
Mixing-Free and Signal-Optimal Learning of Gaussian Graphical Models from Glauber Dynamics
Vignesh Tirukkonda and Gautam Dasarathy
Gaussian graphical model selection is usually studied under independent sampling, but in many applications the data arise as a single trajectory of a dependent
stochastic process. We study exact recovery of the graph from one trajectory of random-scan Gaussian Glauber dynamics. Existing techniques for this problem either inherit the mixing time of the chain, which can be super-
polynomial in the dimension $p$ without strong assumptions, or are suboptimal in the minimum normalized edge strength $\kappa$. We propose two
algorithms that are mixing-free and attain the $\kappa^{-2}$ dependence of the information-theoretic lower bounds. Both instantiate a shared dueling-neighborhood search meta-
algorithm with a local statistic built directly from the update sequence. For every fixed precision
matrix and deterministic initialization, the first
algorithm fits a least-squares regression at the updates of each node and has pointwise recovery horizon $\widetilde O(pd^{2}/\kappa^{2})$, where $d$ is the maximum degree. Its horizon depends logarithmically on a local conditioning quantity and on the initialization potential. The second
algorithm is based on counting occurences of a specific update pattern and requires $\widetilde O(pd^{4}/\kappa^{2})$ updates, with no dependence on any condition number. The central technical challenge is that both statistics are built from dependent, non-stationary observations. Our analysis tackles this by demonstrating how to extract fresh Gaussian innovations from the update sequence, which yields mixing-free control of appropriate quantities. Neither the
algorithms nor their analyses invoke stationarity, a spectral gap, or mixing conditions.
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Machine Learning · Cross-listed from cs.MA
Scalable Policy Optimization for Networked Multi-Agent Reinforcement Learning with Continuous State-Action Spaces
Dongming Wang, Pengcheng Dai, Wenwu Yu et al. (+1 more)
Learning local policies for continuous networked systems requires accounting for the effects of decisions beyond each
agent's observation neighborhood. Spatial decay limits these effects, but a finite critic must also control representation and estimation errors throughout policy optimization. We analyze the Continuous Distributed Coupled Policy Gradient (CDCPG)
algorithm using local random
Fourier features and least-squares temporal-difference critics. For features that retain the boundary inputs required by the local dynamics, we derive an action-value representation with separate spatial and finite-feature residuals. A global integrated transition-approximation bound and a projected Bellman argument control population prediction error without an inverse-conditioning multiplier. We then quantify the dependence of critic estimation on feature excitation and dimension, and construct simultaneous lower confidence bounds for temporal-difference conditioning along the executed iterates. Combining critic error with localized reward aggregation bounds the expected squared projected-gradient mapping by an optimization term and an explicit residual separating spatial approximation, finite features, and omitted distant rewards. For fixed neighborhoods and feature dimension, the shared-oracle sample count is inverse-squared in the excess squared-stationarity accuracy, up to logarithmic factors. The guarantee assumes known local dynamics and rewards, independent discounted-occupancy samples, and stated excitation, decay, and smoothness conditions, and is conditional on favorable feature draws. Numerical studies illustrate related implementations on a linear-coupled-quadratic
benchmark.
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All authors Dongming Wang, Pengcheng Dai, Wenwu Yu, Wei Ren
Machine Learning
Operational Proto-Introspection in Looped Language Models: Process-Quality Taps, Executable Branching, and the Readout-Control Boundary
Jan Kirin
Can a
language model read the quality of its ongoing computation, and can an external intervention turn that readout into better outcomes? We test both questions in a frozen 2.6B looped
transformer, Ouro-RLTT. On GSM8K, a strict pre-answer probe excludes the answer region and gold value yet predicts success: hidden states plus length/log-probability features reach AUROC 0.797 versus 0.731 for those surface features alone (increment +0.066; task-clustered 95% CI [+0.021,+0.112]; 170 tasks). On Horizon Logic, a prospectively extended task-disjoint study gives an increment of +0.111 (CI [+0.056,+0.169]), independently replicated on the new cohort (+0.095) and robust to an
adversarial malformed-sibling shortcut. Recurrence also moves candidate-quality readability to progressively earlier physical depth; the trend replicates across the Ouro family and qualitatively in out-of-family Huginn, although their transfer geometry differs. The readout converts into validated decision-level gains. Hidden-state-based scores improve risk-coverage over shortcut-only scores in four sealed selective-prediction arms, and terminal selection beats matched random even when every candidate is well formed (27/32 correct selections versus 64.8% expected; p = 0.0086). Generative control does not convert: directional steering is negative, a branch screen is bounded, and exact-compute loop allocation and minimal LoRA direction-binding detect no gain. These tests run through bit-exact branch/carry/prune machinery over Ouro's 192-slot recurrent cache, including a suffix-recompute splice saving up to 88% of per-branch layer passes. We call this decision-usable but not generatively controllable property operational proto-introspection. All load-bearing values use source-item-disjoint splits and antisymmetrized pairwise evaluation.
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Machine Learning · Cross-listed from quant-ph
Quantum Reservoir Computing: Recent Advances and Future Directions
Shehbaz Tariq, Muhammad Talha, Arshid Ali et al. (+2 more)
Quantum reservoir computing (QRC) uses the dynamics of a fixed or weakly tuned
quantum system to transform temporal and sequential inputs into measured features, while training is typically confined to a classical readout. This separation reduces reliance on repeated
quantum parameter updates and avoids the barren plateaus associated with variational
circuit training. Its computational power is often attributed to the exponentially large
Hilbert space of the
quantum system. However, the
memory, nonlinearity, and expressivity that determine what a reservoir can actually compute depend jointly on the input encoding,
quantum evolution, observables, measurement, and readout, not on
Hilbert space dimension alone. On hardware, these capabilities are further constrained by finite sampling, hardware noise, measurement backaction, and the cost of estimating observables, so a large state space alone does not guarantee useful computation. In this survey, we develop a common system model that connects these components and use it to organize QRC foundations, computational properties, reservoir architectures, operating protocols, and physical implementations. We examine
spin, photonic, superconducting, bosonic, neutral atom, and other analog platforms, together with applications, software and high performance computing support, benchmarking, and reproducibility. The analysis distinguishes hardware demonstrations from simulations and identifies the assumptions and resources that govern comparisons across implementations. Current results do not establish a broad
quantum advantage over well matched classical reservoirs. We therefore specify the resource accounting,
benchmark standards, and theoretical criteria needed to evaluate claims of
quantum advantage.
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All authors Shehbaz Tariq, Muhammad Talha, Arshid Ali, Muhammad Diyan, Symeon Chatzinotas
Machine Learning · Cross-listed from cs.CV
Recti-Q: Feature-Space Rectification for Out-of-Distribution-Robust Quantized Perception in Edge Robotics
Hamidreza Yaghoubi Araghi, Parastoo Pilevar and Ming C. Lin
Robotic perception pipelines increasingly rely on large
vision backbones deployed on SWaP-constrained edge platforms, making post-training quantization (PTQ) attractive for real-time inference. However, while PTQ often preserves clean in-distribution accuracy, we show that it can substantially degrade reliability under deployment-relevant distribution shifts (e.g., sensor noise, severe weather, and novel operating environments), creating a Quantization-Induced Robustness Gap. Across foundational
vision benchmarks (ImageNet-C and PACS), 4-bit PTQ models exhibit pronounced robustness degradation despite negligible ID accuracy loss. To address this, we propose Recti-Q, a lightweight feature-space rectification framework that freezes the quantized backbone and trains a small classifier-head LoRA adapter using only source data. Recti-Q is architecture-agnostic across CNNs and
Transformers, supports efficient teacher-free training, and recovers a significant portion of the lost robustness, in some cases matching or exceeding FP32 performance. At less than 1% parameter overhead (as small as 6 KB), Recti-Q preserves over 99% of PTQ
memory savings, adds negligible compute, and enables low-bandwidth Over-The-Air (OTA) resilience patching for deployed robotic fleets operating in unpredictable physical environments.
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Machine Learning
Censoring-Aware In-Context Learning for Generalized Supplier Lead Time Estimation in Supply Chain Planning
Christopher Wang, Sebastien Ouellet, Behrouz Haji Soleimani et al. (+1 more)
Supplier lead time
forecasting is a central input to material requirements planning, inventory optimization, and supply chain risk management. However, many industrial lead time
datasets are naturally right-censored: at the time forecasts are required, some orders have not yet arrived. Standard regression and classification approaches discard this information, while conventional survival models require task-specific modeling. We propose LeadTime-ICL (LT-ICL), a censoring-aware in-context learning model for probabilistic lead time
forecasting. LT-ICL combines a
transformer backbone with a conditional normalizing-flow head, producing a full predictive distribution over lead times. The model is pretrained on synthetic right-censored lead time tasks, enabling in-context adaptation to new industrial
datasets without task-specific parameter updates. We provide theoretical support for this formulation by showing that excess CRPS is bounded by prior misspecification and amortized approximation errors, providing clear direction for improving
forecasting performance. We evaluate LT-ICL on 24 proprietary supply-chain
datasets spanning seven industries. LT-ICL achieves the lowest point-
forecasting error on 15 of the 24
datasets, and the lowest probabilistic
forecasting error on 14
datasets, yielding the best average rank across both. These results support right-censored probabilistic
forecasting as a practical formulation for supplier lead time prediction and demonstrate that pretrained in-context models can provide accurate, low-adaptation-cost
forecasting for industrial planning systems.
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All authors Christopher Wang, Sebastien Ouellet, Behrouz Haji Soleimani, Ali Etemad
Machine Learning
Adaptive Two-Stage Online Learning for Service-Affecting Failure Detection in Mobile Core Networks
J. du Toit, G. Fita, J. Salzwedel et al. (+2 more)
Mobile network operators monitor aggregated traffic volumes to assess the operational health of core network infrastructure. Reliable failure detection is challenging due to strong temporal structure, non-stationarity, measurement artefacts, and extreme class imbalance, which limit static threshold-based monitoring. This paper proposes a two-stage online learning framework for traffic-based failure detection in mobile core networks. Stage I incrementally models normal traffic dynamics using lightweight regression with time-aware features. Stage II analyses prediction residuals together with contextual indicators to detect genuine service-affecting network failures. The framework operates fully online under a prequential evaluation protocol, enabling continuous adaptation with low computational overhead. Across linear and non-linear models, the proposed two-stage architecture achieves the best precision-recall trade-off, attaining the highest recall, F1-score, and AUC at acceptable false positive rates. These results demonstrate the importance of explicit residual decomposition for reliable failure detection in streaming mobile core network data.
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All authors J. du Toit, G. Fita, J. Salzwedel, A. Stoltz, R. Wolhuter
Machine Learning
Signed Rectified Flow: Negativity-Controlled Generation
Runlong Liao, Baiyu Su, Lizhang Chen et al. (+1 more)
We introduce Signed Rectified Flow (Signed RF), a generalization of Rectified Flow that targets the signed measure $\pi^{sign} = (1+\alpha)\pi^+ - \alpha\pi^-$, where $\alpha>0$, $\pi^+$ is the distribution to promote, and $\pi^-$ is the distribution to suppress. Although direct sampling from a signed measure is not well-defined, Signed RF induces a valid generative process that concentrates probability in regions where the signed measure is positive while provably excluding regions dominated by its negative component. It therefore provides a principled framework for incorporating negative information and exclusion constraints into generative modeling. We analyze the signed continuity equation underlying Signed RF and use a charged-particle interpretation to explain how negative mass forms exclusion barriers. This theory further motivates practical adaptive guidance
algorithms. Across several applications, Signed RF improves the fidelity-diversity trade-off on ImageNet, reduces nearest-neighbor similarity in anti-memorization experiments, and reduces nudity induced by
adversarial prompts in Stable
Diffusion 3.5 while preserving CLIP and aesthetic scores.
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All authors Runlong Liao, Baiyu Su, Lizhang Chen, Qiang Liu
Machine Learning
Automated Data Engineering and Feature Selection for the Case Study of Warpage Detection in Fused Deposition Modeling
Saleh Valizadeh Sotubadi, Nazanin Mahjourian and Vinh Nguyen
This study contributes toward development of an Automated Data Processing (ADP) framework designed to evaluate and reinforce optimal machine learning model-feature combinations for predictive tasks in fused deposition modeling (FDM) process
datasets. The methodology is centered around a reinforcement learning-inspired policy updating mechanism, where multiple machine learning models are trained on both full feature sets and feature subsets selected through Shapley-based Explainable AI (SHAP XAI) across 217
datasets. At each episode, the framework assesses the predictive accuracy and F1-scores of each model-feature pair, computes a scalar reward, and updates $Q$ values to guide future model selection. SHAP XAI feature importance was employed to generate reduced yet informative feature subsets to enable the framework to explore performance with dimensionality. The policy was shown to evolve over multiple episodes, with reward distributions used to visualize performance stability. Overall, results indicate that leveraging the ADP framework through XAI
algorithms successfully converges toward optimal model-feature configurations with improved accuracy and stability. Specifically, the proposed framework improves the test-set AUC from 0.9248 to 0.9731 and increases the mean reward value by more than fifty percent compared with the baseline full-feature configuration.
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Machine Learning
Now We Know? A Systematic Comparison of TerraMind and THOR
Frederick Schindlegger, Kenzo Bounegta, Eva Gmelich Meijling et al. (+5 more)
Benchmarks for Geospatial Foundation Models (GFMs) increasingly rank models by aggregate score, but such rankings obscure why models differ: how much of the gap is architecture, how much is decoder capacity, and how much is a use-case-specific artefact? This study addresses that gap through a controlled comparison of two GFMs developed under European Space Agency's $\Phi$-lab with contrasting design philosophies: THOR, which introduces a compute-adaptive architecture supporting variable patch sizes and unifies Sentinel-1, -2, and -3 data at their native resolutions; and TerraMind, a
multimodal generative GFM pretrained with a dual-scale
token/pixel objective that enables any-to-any cross-modal generation (Thinking-in-Modalities) to infer missing sensors at inference time. Rather than reporting a single leaderboard, we investigate the axes along which the two architectures actually differ - patch size, decoder complexity, finetuning regime, input modality, and model scale - across ten use cases spanning
segmentation and regression in diverse domains, including
climate disaster response, methane leak detection, snow monitoring, or sea ice mapping. We find that architectural design choices - patch size and decoder type in particular - explain more performance variance than model identity itself, that the two models embody complementary investment strategies (pretraining-time scale for TerraMind versus inference-time tokenisation for THOR), and that correctly interpreting results requires
dataset-level characterisation. The resulting picture is not a single winner but a set of hypotheses and a diagnostic ablation methodology that we expect to generalise to future GFMs beyond THOR and TerraMind.
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All authors Frederick Schindlegger, Kenzo Bounegta, Eva Gmelich Meijling, Johannes Jakubik, Arnt-Børre Salberg, Theodor Forgaard, Nicolas Longepe, Valerio Marsocci
Machine Learning
The Dynamics of Discoverability: How Trajectories and Priors Shape Equation Recovery
Matteo Gallo, Fabio Anselmi and Paolo Lazzari
How the dynamical regime of the observed system affects equation discovery has mainly been investigated through comparisons across systems. However, such comparisons vary both the equations and the dynamics, confounding the effect of the regime with the difficulty of recovering the equations symbolically. We separate the two by varying the forcing of Lorenz-84, moving its fully observed post-transient trajectories through fixed-point, periodic, and chaotic regimes while preserving the equations' functional form. Within each regime, we separately vary the amount of data, the noise, and prior knowledge of which terms the equations contain. We then measure how well two complementary approaches, sparse regression over a fixed library of candidate functions (SINDy) and an evolutionary search over symbolic expression trees (PySR), recover the true equations' terms and coefficients. We find that recovery depends on whether the sampled states distinguish combinations of candidate functions: equations remain poorly recovered from fixed-point data even when the candidate set contains only the true terms. We link the effect of the dynamics on both
algorithms to one object: the moment
matrix of the candidate functions under the invariant measure of the regime. Small
eigenvalues mark weakly distinguishable combinations of candidate functions: we show that more data, less noise, and more prior knowledge can mitigate the resulting recovery difficulties, while a zero
eigenvalue makes distinct equations indistinguishable on the visited states. Hence, a more precise prior needs less informative data, with consequences for data collection, method design, and evaluation.
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Machine Learning
Hybrid Latent-Structural Fusion (HLSF) for Cyber Anomaly Detection
Dorianis M. Perez, Maksim E. Eren and Bryan E. Kaiser
Malicious anomalous activity detection is a fundamental challenge for cyber security systems. Both tensor decomposition under statistical framework with CANDECOMP-PARAFAC alternating Poisson regression (CP-APR) and normalizing flows have proven to be powerful unsupervised machine learning methods that model multi-dimensional data and capture complex and multi-faceted details of behavior profiles in cyber security applications. In this study, we propose Hybrid Latent-Structural Fusion (HLSF), a weighted anomaly fusion framework integrating CP-APR structural anomaly scores with latent-space density scores derived from normalizing flows. In our experiments, we show that the HLSF framework improves anomaly detection performance on a
dataset of real-world compromised user credentials collected from the large enterprise network of Los Alamos National Laboratory (LANL) during a red-teaming exercise, compared with using CP-APR or normalizing flows alone.
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Machine Learning · Cross-listed from cs.CL
Structured Output Collapses Answer Diversity Across 44 Language Models
Tapan Parikh
When a
language model must choose one answer from a large space of equally valid options, a format clause – "Reply with JSON only" – changes which answer it chooses. We re-run the One-Word Census (arXiv:2607.12796): 31 wide-answer-space category
prompts asked of 44 models, now with the reply requested in JSON – no schema enforcement, no constrained decoding, only the request. Convergence deepens sharply: on the unconstrained "Pick a word"
prompt the modal answer rises from 41% to 64% of the pool and distinct answers fall from 52 to 36; mean answer-choice surprisal drops from 1.80 to 1.58 bits. The tax is progressive: six of 44 models move individually (BH-FDR q=.10), all toward the mode, led by the most distinctive models, while the conformist floor is immobile. It is a sharpener, not a re-indexer – the plain-chat modal answer survives in 28 of 31 categories. Defaults are register-indexed: a within-run re-sample (n=20) finds JSON shifts 53% of a model's stable chat defaults, mostly back to the crowd, and installs defaults absent from chat (Claude Fable 5 answers "cerulean" for colour 0% of the time in chat, 100% in JSON). Full-battery controls reveal a register gradient: compression is significant and specific to the answer-delivery formats models are trained to speak (JSON -0.22 bits, p=.0002; XML -0.19, p=.002), absent for YAML and CSV, and reversed for an arbitrary bracket wrapper (+0.13, p=.009) – weighing the mechanism toward tool-use post-training. Enforcing the schema at the decoder (response_format) compresses no further than the request (-0.03 bits): the collapse lives in the model's response to the register, not the decoder. Structured output is how software consumes
language models, and that surface is served by a measurably more homogeneous model than the chat surface on which models are evaluated, compared, and chosen.
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Machine Learning
RRPO: Reference-Relative Policy Optimization with Stratified Conditional Rollouts
Yuxin Xiong, Xunyi Jiang, Rohan Surana et al. (+8 more)
Group Relative Policy Optimization (GRPO) has shown strong effectiveness in reinforcement learning from verifiable feedback, where sampled rollouts can be compared within a group using task-provided correctness signals. However, extending group-relative optimization beyond verifiable settings is challenging because success in many tasks is not captured by a single correctness criterion. We propose Reference-Relative Policy Optimization (RRPO), which generalizes GRPO by replacing direct correctness-based advantage construction with reference-relative contrastive comparisons. RRPO first uses stratified conditional rollouts to construct positive and negative anchor sets, and then trains a metric projection head with a set-contrastive objective to compare candidate rollouts against these anchors. The resulting
alignment scores directly define contrastive advantages: during policy optimization, the projection head is frozen, and the scores are centered within each rollout group in a standard group-relative objective. We evaluate RRPO using anchor-based contrastive advantages throughout policy optimization, without relying on task ground-truth verifiers. Across verifiable
reasoning, open-ended generation, and post-SFT settings, RRPO remains competitive with verifier-based optimization, improves over weakly supervised baselines, and provides additional gains after supervised fine-tuning.
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All authors Yuxin Xiong, Xunyi Jiang, Rohan Surana, Xintong Li, Sheldon Yu, Nikki Lijing Kuang, Ryan A. Rossi, Jingbo Shang, Tong Yu, Julian McAuley, Junda Wu
Machine Learning
Weak-to-Strong Learning in Decision Making
Jingwei Ji and Renyuan Xu
Many operational decisions rely on predictive models that estimate uncertain outcomes conditional on observable contexts. Training such models, however, often faces a fundamental data asymmetry: labeled outcomes are scarce or costly to obtain, while contextual
covariates are abundant. Motivated by this data asymmetry, we develop a decision-aware weak-to-strong (W2S) framework that leverages both labeled and unlabeled data to improve contextual
stochastic optimization. Specifically, we first train a weak model using limited labeled data and then use it to generate predicted outcome distributions on unlabeled contexts. These distributions provide soft supervision for training a strong model. We establish a non-asymptotic upper bound on the excess decision risk of W2S and a complementary lower bound for a strong-only
benchmark. Their comparison yields explicit sufficient conditions under which W2S improves downstream decision performance. The key quantity is the correlation dimension between the weak and strong feature representations: when it is small, abundant unlabeled data reduce the effect of teacher errors along non-overlapping directions. A synthetic newsvendor experiment and a comment moderation experiment based on real-world data provide empirical evidence consistent with the theory.
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Machine Learning
AHEAD: Advancing Multi-Class Label Aggregation with Interpretable Cross-Annotator Modeling
Ju Chen, Sijia Xu, Jun Feng et al. (+2 more)
Crowdsourced labeling provides valuable labeled data for domains across natural
language processing, computer
vision, and
video. Label aggregation aims to infer latent true labels from noisy and biased annotations, with the key lying in annotator reliability estimation. Despite promising progress, existing approaches struggle with one real-world bottleneck: most individual annotators label only a small subset of tasks, making accurate annotator estimation highly intractable. In this paper, we focus on the considerably more challenging multi-class label aggregation and propose AHEAD (cross-Annotator learning and High-confidEnce Annotator-guideD label aggregation), a cross-annotator learning framework that advances annotator reliability estimation by leveraging the population-level data. Specifically, AHEAD first learns high-dimensional cross-annotator contexts via a graph neural network, deriving multi-view, complementary annotator
embeddings by aggregating individual-level annotator features with contextual information. These
embeddings are then decoded into interpretable annotator-specific confusion
matrices to fit the observed labels. We formulate a composite objective incorporating high-confidence annotators to alleviate the unsupervised training issues faced by prior models. Experiments on 10 real-world
datasets spanning NLP, CV,
Video, and Audio show that AHEAD substantially improves label accuracy, increasing average accuracy from 68.75% to 73.23%, with gains of up to 14.9% in the best case. Meanwhile, scalability experiments on the largest
dataset further demonstrate the overall superiority of our method.
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All authors Ju Chen, Sijia Xu, Jun Feng, Zhiqiang Gao, Zhengyi Yang
Machine Learning
Estimating Rare Events in Language Models with Proper Evaluation
Nikita Y. Parulekar and Anqi Liu
Quantifying the risk of rare failures in
language models, such as those triggered by
adversarial distribution shifts or very large-scale deployments, requires estimating probabilities far too small for random sampling. While recent work has formalized Low Probability Estimation, existing pipelines remain fragile in the rarest regimes:
estimators can suffer zero-estimate collapse or systematic bias, and standard evaluation losses can become unstable or poorly matched to asymmetric safety costs. In this work, we introduce Gradient Activation Adaptive Multi-Level Splitting (GA-AMLS), which adapts rare-event Monte Carlo methods to the continuous activation space of
language models. Specifically, GA-AMLS uses a gradient-based MCMC kernel to navigate activation space, eliminating the zero-estimate collapse of input-space search and replacing the independence assumptions of prior activation-space
estimators with conditional sampling under an explicit, heavier-tailed activation prior. We also propose the Shifted-Power Bregman (SPB) Loss, a proper scoring rule that remains finite for zero-estimates and offers tunable asymmetry between underestimation and overestimation penalties. Experiments on small
transformer models reveal a bias-variance tradeoff: GA-AMLS achieves the lowest loss under symmetric evaluation, reducing average log-space squared error relative to the strongest baseline across model sizes, while methods with overestimation bias prevail under asymmetric penalties. Our findings highlight that
estimator choice should be matched to deployment context. More broadly, our work establishes activation space as a tractable domain for rare-event estimation in
language models, circumventing the brittleness of discrete input-space search.
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Machine Learning
CANDOR: Chance-Calibrated Neighborhood Discordance in Frozen Encoders for Medical Imaging
Soroosh Tayebi Arasteh, Sven Nebelung and Daniel Truhn
In medical imaging, one frozen foundation encoder is often reused for many tasks. The encoder is usually chosen by the area under the receiver operating characteristic curve (AUROC) of a head trained on its features. The AUROC does not measure whether the encoder separates positive from negative images in its feature space. Chance-calibrated neighborhood discordance (CANDOR) measures this separation without training a head. Among images acquired the same way, a positive image is discordant when its k nearest negatives are more similar to it on average than its k nearest positives are. The discordance rate D is the share of discordant positives. When the neighbors come from positive and negative candidate sets of equal size, D has the chance level 1/2 for features without information about the label. With unequal candidate sets, all 11 chest encoders have rates above 1/2 (0.732 to 0.927) on the 12 chest findings of MIMIC-CXR and CheXpert. These rates increase as the finding becomes rarer. With equal sets, the same encoders have rates below 1/2 (0.277 to 0.463). On the chest test split, linear heads miss 0.301 of the discordant positives and 0.165 of the other positives. Across 22 encoders, 605,443 images, and 8 tasks in 7 domains, the best encoder of every task has a rate below 1/2. Because computing D takes one forward pass per image, a hospital can compare candidate encoders before it trains any head.
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Machine Learning · Cross-listed from cs.CL
Relay-Bench: Evaluating LLMs on Multi-Domain Reasoning Chains
Liam Swayne
Introducing Relay-Bench, an unsaturated, holistic, text-only
benchmark that measures LLMs' ability to complete an assortment of tasks from distinct domains in a single
prompt. The leading model, GPT-5.5 (xHigh), scores 43.3%. The test set entirely consists of composite problems: groups of single-domain subproblems that are strung together into challenges that require
reasoning across multiple domains in combination. Many of these problems then have layers of complexity added through
prompt encoding and deliberate context bloat. Domains tested include visual
reasoning, coding, math, information extraction (with a focus on web search), problem-solving, general knowledge, and data analysis. No restrictions are imposed outside of the model harness, and models are explicitly encouraged to leverage code-execution, web searches, and all available tools. All problems are composed of two to thirteen subproblems and do not require multi-modal input or output.
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Machine Learning
Intelligence from Learnable Novelty
Yanbo Zhang and Michael Levin
Intelligence appears under different names in different fields: as data compression in statistics and machine learning, as universal computation in dynamical systems, and as adaptive behavior in
agents. Each field carries its own objective, and the two most influential drives often fail in mirror image: novelty search, which seeks surprise, is transfixed by a noisy television screen, while the free-energy principle, which avoids surprise, is most content in a dark room. Both failures have a single cause: each objective treats as one quantity the surprise a learner can convert into knowledge and the surprise it never can. Here we show that the learnable part of that information, which we call learnable novelty, yields the seemingly disparate projections of intelligence, and we give a closed-form
estimator of it built on a cheap and differentiable reservoir computer. Used as a measure, with no supervision of any kind, the
estimator recovers decades of complexity classification, ranking the Turing-complete rule~110 highest among the elementary cellular automata. Used as an objective, its gradient carries a neural cellular automaton from simple dynamics into a regime of
solitons, the traveling, colliding structures by which rule~110 computes, as well as organizes the representation of an image encoder around the ten digit classes of MNIST, fully unsupervised: no label ever enters training. Handed to a reinforcement-learning
agent as an intrinsic reward, it supplies the exploration that task rewards lack, improving on the task baseline in nine of ten environments and collapsing in none. Complexity generation, abstraction, and exploration, ordinarily pursued with unrelated objectives in separate fields, thus emerge from ascent on one differentiable quantity, and the projections of intelligence gain a common quantitative footing.
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Machine Learning · Cross-listed from stat.ME
Using binary silver labels in electronic health records-based computable phenotyping algorithms
Shuhe Wang, Matthew T. Slaughter, Jennifer C. Nelson et al. (+1 more)
Gold-standard phenotype labels are often unavailable at scale in electronic health record (EHR) studies because they require manual chart review. Weakly supervised phenotyping methods instead use silver-standard labels, such as diagnosis-code counts, natural
language processing (NLP) mentions, medication indicators, or laboratory thresholds. PheNorm is widely used for this purpose, but its original formulation was designed for count-valued silver labels and relies on log transformation, utilization normalization, and Gaussian mixture modeling. These steps are not directly suited to binary silver labels, which are common and may be highly informative. We propose Binary PheNorm, an extension that uses binary silver labels directly in the corruption-and-regression denoising step and produces a continuous phenotype score without EM calibration. We also consider a lasso-regularized version for high-dimensional EHR settings and combined models using both binary and count labels. In simulations, Binary PheNorm achieved strong discrimination using binary labels alone and often improved performance when combined with count labels. In anaphylaxis, AUC increased from 0.793 for an epinephrine-mention indicator to 0.891-0.892 after Binary PheNorm. In acute pancreatitis, AUC increased from 0.736 for a lipase-threshold indicator to 0.805-0.819. These results support Binary PheNorm as a practical weakly supervised approach when informative binary silver labels are available.
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All authors Shuhe Wang, Matthew T. Slaughter, Jennifer C. Nelson, Brian D. Williamson