Machine Learning
Probabilistic Physics-Informed Neural Networks for Estimating Heterogeneous Elastic Properties from Low-Resolution and Noisy Displacement Data
Tatthapong Srikitrungruang and Jaesung Lee
Estimating spatially heterogeneous elastic properties from low-resolution displacement measurements is a severely ill-posed inverse elasticity problem because low resolution obscures spatial details needed to distinguish heterogeneous property variations, and small measurement perturbations or fitting errors are amplified through inverse estimation. Existing inverse methods often rely on high-fidelity observations and manually prespecified loss weights, limiting their adaptability and making them sensitive to noise and resolution degradation. We propose a Probabilistic Inverse Elasticity Physics-Informed Neural Network (PIE-PINN) framework for robust estimation of Young's modulus and Poisson's ratio from noisy, low-resolution displacement data. PIE-PINN models displacement observation, strain-discrepancy, and
equilibrium residuals using Laplace distributions within a unified probabilistic model. To improve robustness, the framework combines a B-spline-guided displacement network with a hierarchical half-Cauchy model for displacement residual scales. The B-spline provides a smooth global representation of the displacement field, while the neural network correction captures local variations. The hierarchical scale model adaptively downweights severe displacement fitting errors, enabling more robust recovery of the latent mean displacement field. An alternating maximum-likelihood training strategy updates the mean through weighted residual minimization and updates the scales to adjust the loss weights. Systematic case studies across varying noise levels and observation resolutions demonstrate the robustness of PIE-PINN.
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Machine Learning
CASP: Learning-Augmented Offline Approximation with Verifiable Certificates and Bounded-Loss PAC Guarantees
Haifeng Li and Mo Hai
Machine-learned predictions can speed up offline NP-hard optimization, but asking a predictor what to do amounts to asking it to solve the problem, and committing an unchecked prediction forfeits every worst-case guarantee. CASP (Certificate-Augmented Solution
Pruning) instead asks which parts of the search space may be ignored, and accepts each answer only after a sound
polynomial-time verifier has checked it, so correctness never depends on prediction quality. We develop the learning theory of this design. The verifier makes the induced loss class uniformly bounded, so certificate parameters are learnable from $\tilde O(\varepsilon^{-2}\log K)$ samples ($K$ the maximum instance size), whereas the unverified commitment class admits no distribution-free rate and, under cost spread $R$, none below $\Omega(R/\varepsilon^2)$. Filtering noisy predictions by verifiable confidence dominates the standard min-combiner, with a margin we compute in closed form, and the prediction stays useful even given the LP, because it breaks ties on degenerate optimal faces, where every symmetric LP policy, meaning one whose commitments depend on the instance only through the verifiable confidence values, provably stalls. Experiments on five problems test the theory's quantitative predictions. With trained predictors, unverified
pruning loses up to $26%$ of the optimum under distribution shift, while the verified deployment of the same predictions loses nothing.
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Machine Learning · Cross-listed from cs.SD
MIDI-RAE-JEPA: Hierarchical Representation Learning and Generation for Symbolic Music
Scott H. Hawley
Rich internal representations of musical structure are essential for music understanding tasks such as machine-assisted music co-writing, yet self-supervised approaches for symbolic music representation remain underexplored, particularly those that encode the hierarchical multiscale nature of musical structures. We present MIDI-RAE-JEPA, combining a pitch- and time-shift equivariance objective with LeJEPA and a Swin
Transformer V2 encoder to learn such hierarchical representations of symbolic music encoded as piano roll images. The time-shift equivariance objective encourages the model to internalize temporal musical relationships. The encoder is trained purely on self-supervised objectives – including a masked
embedding predictor (MEP) – with collapse prevented via SIGReg. A separate decoder trained on the frozen encoder
embeddings achieves reconstruction F1 of 0.995, and a flow matching generative model conditioned on those
embeddings produces generations that closely match the pitch register and rhythmic density of the conditioning excerpt, while mismatched conditioning yields unrelated but musically plausible output. Learned representations outperform a Haar scattering transform baseline on a downstream
emotion classification task, and
embedding distances increase monotonically with pitch and time shift magnitude, confirming measurable equivariance. These results suggest that equivariance-based SSL objectives, combined with sufficient fine-level encoder capacity, provide a viable path toward semantically rich, generatively useful representations of symbolic music.
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Machine Learning
Muse: Representation Geometry of Muon Beyond Normalized Momentum
Da Chang, Qiankun Shi, Lvgang Zhang et al. (+4 more)
Muon-style optimizers apply a polar map to
matrix momentum, but their updates also depend on the representation of each parameter block before orthogonalization. We study this representation choice as a form of optimizer geometry and introduce {\method}, a family of
Muon-style optimizers that shares the same momentum rule and Newton–Schulz backend across native, nearest-square, skinny, and vector representations. Each Frobenius-isometric representation induces a distinct polar steepest-descent geometry, in which the shorter
matrix dimension determines the number of supported singular channels, the pullback scaling, and the constants in
stochastic nonconvex convergence bounds. In a teacher–student model,
curvature collapse and an isotropic Marchenko–Pastur spectral profile connect early-stage dissipation to the represented
nuclear-to-squared-Frobenius norm ratio. Pretraining experiments on LLaMA2-130M and LLaMA2-600M, together with fixed-momentum diagnostics, show that balanced non-native representations can match the performance of the native representation, whereas reducing the shorter dimension weakens the scaling and singular-channel support, leading to behavior that increasingly resembles normalized momentum.
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All authors Da Chang, Qiankun Shi, Lvgang Zhang, Di He, Yaoshuai Ma, Ganzhao Yuan, Yongxiang Liu
Machine Learning
xHC: Expanded Hyper-Connections
Xiangdong Zhang, Xiaohan Qin, Sunan Zou et al. (+10 more)
Hyper-Connections (HC) expand the residual stream of
Transformers into $N$ parallel streams, providing a form of
memory scaling beyond model width and depth.
Manifold-Constrained HC (mHC) stabilizes this formulation at scale. The large gains from $N{=}1$ to $N{=}4$ suggest residual-stream expansion as a promising scaling axis. However, existing HC-family methods typically stop at $N{=}4$. Our experiments reveal why: scaling mHC beyond this point yields diminishing performance gains and rapidly increasing training cost. We attribute this limitation to two bottlenecks: insufficient write-back information for an expanding number of streams and residual-mixing generation whose cost scales cubically with $N$. To address both bottlenecks, we propose xHC (Expanded Hyper-Connections), the first HC-family method to achieve meaningful expansion beyond $N{=}4$. xHC combines temporal feature augmentation for richer write-back with a sparse residual-stream architecture that updates only $k=4$ of the $N=16$ streams while retaining dense access to the full residual state. Across 18B and 28B MoE models, xHC delivers strong and consistent downstream improvements. On an 18B MoE model, xHC improves the average downstream score by 4.0 points over mHC, while adding only modest training FLOPs over the vanilla baseline. Scaling-law experiments show that the vanilla and mHC require $1.50\times$ and $1.19\times$ the compute of xHC, respectively, to reach the same loss. Practical large-$N$ training also requires controlling
memory traffic from the expanded residual state. We therefore introduce xHC-Flash, which reduces the per-sublayer
memory traffic from $73.5C$ to $40C$, comparable to the $34C$ required by mHC at $N{=}4$, while retaining the gains of full xHC. Together, xHC and xHC-Flash make large-$N$ residual-stream expansion effective and practical for LLM pre-training.
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All authors Xiangdong Zhang, Xiaohan Qin, Sunan Zou, Tuo Dai, Xiaoming Shi, Huaijin Wu, Yebin Yang, Zhuo Xia, Shaofeng Zhang, Lin Yao, Yuliang Liu, Yu Cheng, Junchi Yan
Machine Learning · Cross-listed from math.AP
Riesz-Kernel Stein Variational Gradient Descent: Renormalized Entropy and Long-Time Particle Limits
Trevor Teolis and Maarten V. de Hoop
Stein variational gradient descent (SVGD) transports interacting particles toward a target distribution through deterministic kernelized dynamics. Singular Riesz kernels are attractive because they can provide quantitative population-level convergence, but at the finite-particle level the corresponding Stein energy has infinite self-interaction. We study periodic Riesz SVGD with self-interaction removed and prove a many-particle, long-time sampling
theorem. Throughout the range in which the singular Stein energy is locally integrable, under a uniform bound on the initial relative
entropy per particle, the time-averaged empirical-measure law converges weakly to the point mass \(\delta_\pi\) at the target as the particle number and any diverging averaging horizon tend to infinity. We also show that the empirical-measure laws induced by invariant particle laws of finite relative
entropy converge weakly to \(\delta_\pi\), without a uniform
entropy bound. Below the logarithmic singularity threshold, we obtain an explicit algebraic finite-particle error bound. These results extend the joint-
entropy approach for smooth-kernel SVGD to singular interactions.
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Machine Learning
A Continuous-Time Reinforcement Learning Framework for Fine-Tuning Discrete Diffusion Models
Zikun Zhang, Jiayuan Sheng, David D. Yao et al. (+1 more)
We formulate reinforcement learning (RL) in continuous time with discrete state spaces and possibly arbitrary action spaces via a
stochastic control approach, where the state dynamics are modeled as a controlled continuous-time Markov chain (CTMC). We consider policy optimization problems and derive corresponding policy gradient methods, leading to continuous-time variants of proximal policy optimization (PPO) and group relative policy optimization (GRPO). As a primary application, we develop a continuous-time RL framework for fine-tuning score-based discrete
diffusion models, which enables reward-driven optimization without requiring differentiability on the reward signals. In contrast to the existing GRPO-based approaches that only rely on terminal rewards, our formulation allows intermediate reward or advantage signals to be incorporated throughout the denoising trajectory. Importantly, when specialized to masked
diffusion models (MDMs), our framework encompasses a rich class of policy parameterizations over the vocabulary simplex with analytically tractable probability ratios, providing a unified perspective on exploration and policy optimization in MDMs. For
diffusion large
language models (dLLMs), we further propose trajectory subsampling techniques to efficiently estimate computationally prohibitive trajectory likelihoods, reducing the computational cost of computing per-position probability ratios. We showcase the effectiveness of our methods on both low-dimensional
entropy-regularized optimization problems and RL post-training of dLLMs on
reasoning and coding tasks.
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All authors Zikun Zhang, Jiayuan Sheng, David D. Yao, Wenpin Tang
Machine Learning
Adaptive Runge-Kutta Step Control Buys Training Loss, Not Generalization: An Honest Compute-Matched Study of RK-Adam Optimizers
Akhilesh Gogikar
Interpreting optimizers as gradient-flow discretizations has motivated applying higher-order Runge-Kutta (RK) integrators to neural networks. We build a representative Adam variant (Bogacki-Shampine 3(2) RK pair, FSAL reuse, local-error step control) and evaluate it under a strict compute-matched protocol giving every method the same gradient-evaluation budget - an accounting this literature rarely enforces. Under it the RK variant loses to plain Adam on training loss in both minibatch and full-batch (RK's best-case) training. Instrumenting it shows the "adaptivity" is illusory: normalized error stays far below tolerance, the step size pins at its growth cap from step one (98-100 percent of steps), and no rtol x hmax x h0 setting makes it act; tolerances spanning 100x give bit-identical trajectories. The method is exactly fixed-step Adam with an averaged gradient at 3-4x cost. Repairing it (true reject branch; error on the applied map) reverses the full-batch result - about 40x lower training loss than tuned Adam - and a fixed-step control isolates adaptivity (an emergent warmup-and-growth schedule) as the mechanism. But the gain is fragile to the initial step size and does not reach test accuracy. A pre-registered follow-up rules out the obvious explanations: deeper minimization does not overfit, and an explicit temperature knob only hurts - leaving a trajectory effect, the controller selecting a minimum generalizing 1.3-3.4 points below first-order descent at equal depth. An n=10 study confirms one secondary effect: gradient averaging is a genuine implicit regularizer, beating lr-matched Adam and AdamW on 10/10 seeds - yet RMSprop and NAdam match or beat it at a third the per-step cost. Higher-order adaptive integration buys deeper deterministic minimization and a small regularization effect, but nothing a cheaper, well-tuned first-order baseline does not already provide.
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Machine Learning · Cross-listed from cs.AI
RetroAgent: Harnessing LLMs to Search Over Structured Memory for Agentic Retrosynthesis Planning
Yanqiao Zhu, Jingru Gan, Xiaoqi Sun et al. (+8 more)
Multi-step retrosynthesis planning seeks to decompose a target molecule into commercially available building blocks through a sequence of feasible reactions. The vast combinatorial search space makes this task challenging even for expert chemists. Traditional methods combine tree search with offline-trained value networks that score candidates in isolation, without
reasoning about complete multi-step routes. Recent work leverages Large
Language Models (LLMs) for this task, but relies on simple interfaces that limit exploration of the full search space. We introduce RetroAgent, an LLM
agent that bridges symbolic search and neural
reasoning through a harness with structured
memory. Through
memory and chemistry tools, the
agent observes the full search state, including explored routes, available alternatives, and properties of intermediates, enabling informed decisions grounded in both global progress and domain knowledge. Experiments on in-distribution and out-of-distribution
benchmarks demonstrate that RetroAgent delivers strong performance and generalization.
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All authors Yanqiao Zhu, Jingru Gan, Xiaoqi Sun, Fang Sun, Yidan Shi, Md Mofijul Islam, Chao Shang, Wenhao Gao, Connor W. Coley, Yizhou Sun, Wei Wang
Machine Learning · Cross-listed from cs.CV
Multi-Scale ViT Inference with Habitat-Fit Priors and kNN Retrieval for Multi-Species Plant Identification
Alper Erten, Murilo Gustineli and Adrian Cheung
This paper describes DS@GT ARC's third-place solution to the PlantCLEF 2026 challenge on multi-species plant identification in vegetation quadrat images, where systems must predict every species present in high-resolution (~3000 x 3000 pixel) plot photographs while training only on single-label images of individual plants. The pipeline is built around a fine-tuned DINOv2 ViT-L/14 classifier applied over a multi-scale tile decomposition of each quadrat, with per-tile predictions blended with a FAISS kNN retriever and post-processed by source-aware temporal fusion across repeated plot visits, a habitat-fit demotion that injects geographic and altitude priors from the training data, and a South-Western Europe geographic mask. Habitat-fit demotion and multi-scale aggregation are the largest individual contributors in the ablations. Two complementary training-centric directions, a cross-region
transformer with noisy-student
distillation on the LUCAS
dataset and a label-as-query
transformer decoder over synthetic CLS-domain pseudo-quadrats, yielded null results. An inference-time augmentation with instance-aware
segmentation crops also did not improve performance. The selected submission reaches a private-leaderboard macro-F1 of 0.43902 (third place; public 0.51096); an unselected configuration of the same pipeline scored above 0.45 on the private set. Code: https://github.com/dsgt-arc/plantclef-2026.
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Machine Learning
Non-vacuous Generalization Bounds for Reinforcement Learning with Verifiable Rewards
Yuxuan Zhu, Rohan Alur and Daniel Kang
While reinforcement learning with verifiable rewards (RLVR) is widely used to improve the
reasoning capabilities of large
language models (LLMs), the generalizability of the resulting models remains poorly understood. In this work, we establish the first non-vacuous generalization bounds for parameter-efficient RLVR fine-tuning at the billion-parameter scale. Our approach adapts PAC-Bayes compression bounds to this setting, and addresses the inherent stochasticity of
token generation by applying the Gumbel-max reparameterization trick. To operationalize these bounds, we propose the Progressive RLVR framework, which integrates RLVR with on-policy
distillation, TinyLoRA, and model quantization. Progressive RLVR empirically retains 84-97% performance of standard LoRA fine-tuning while producing models that are 14,796x more compressible. We show that this framework yields non-vacuous generalization bounds in four domains: mathematical problem-solving, programming, general-knowledge
reasoning, and Text-to-SQL. Our bounds exceed the accuracy of the base model by 9-51% and lie within 6-11% of the accuracy of the fine-tuned models.
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Machine Learning · Cross-listed from cs.AI
SAGA: Schema-Aware Grounding for Agentic Text-to-SPARQL Generation
Yiming Zhang and Koji Tsuda
Complex knowledge base question answering (KBQA) is commonly approached through either information
retrieval over a question-specific subgraph or semantic parsing into an executable logical form. We study the latter paradigm. Recent large
language model
agents make semantic parsing interactive: they alternate between
reasoning, querying the knowledge base, and extending a partial SPARQL query. This interleaving reduces reliance on one-shot generation, but makes the quality of KB grounding depend on what the interaction tools expose. Existing
agents retrieve or prune candidate properties mainly through lexical relevance and instance-level observations, without systematically conditioning on entity types, property domains and ranges, or the expected answer type. We call this failure mode type-blind grounding. It enlarges the grounding search space and often produces plausible-looking but semantically incompatible triple patterns that execute to empty results. We propose SAGA (\underline{S}chema-\underline{A}ware \underline{G}rounding for \underline{A}gentic Text-to-SPARQL Generation), a training-free framework that turns property exploration into a schema-constrained grounding operation. SAGA maintains a persistent bidirectional type state, filters known-incompatible property candidates at construction time, presents the remaining graph patterns in a compact schema-annotated format, and handles missing schema information permissively through empirical and trace-local evidence. Across nine
benchmark settings over Wikidata and Freebase, SAGA achieves the highest F1 on all nine settings and the highest exact-match accuracy on eight, while reducing empty-result queries across all reported Wikidata settings.
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Machine Learning · Cross-listed from physics.chem-ph
Full-data accuracy with fewer labels for training and fine-tuning machine-learning force fields
Sheng Bi, Yi-Ze Wang and Jun Cheng
Machine-learning force fields (MLFFs) are reliable only near their training distribution, making efficient construction of diverse training sets a major bottleneck for both train-from-scratch and foundation fine-tuning workflows. Active learning can reduce this cost, but standard model-committee uncertainty is impractical for foundation MLFFs because each committee member requires a separate fine-tuning run. We present an active-learning workflow based on last-layer-projection regression (LLPR), a forward-pass-cheap per-configuration uncertainty
estimator. Across molecular, condensed-phase, and electrolyte systems, LLPR identifies compact, high-value training sets that recover full-data accuracy using only a small fraction of electronic-structure labels. In foundation-model fine-tuning, LLPR-selected configurations approach the practical fine-tuning ceiling with substantially fewer labels than random selection. In iterative electrolyte fine-tuning, LLPR detects unphysical local coordination before new labelling, calibrates uncertainty in force-error units, and supports retrospective convergence monitoring. The resulting models reproduce reference density and Li–O coordination structure, providing a scalable uncertainty-quantification strategy across MLFF training regimes.
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Machine Learning · Cross-listed from cs.CE
One-Shot Generative Design for Disordered Metamaterials via Self-Organizing Neural Cellular Automata
Yujie Xiang and Liwei Wang
Disordered metamaterials feature microstructures with inherent randomness and irregularity, enabling them to achieve broader property coverage and superior performance unavailable in their regular counterparts. Despite their promise, designing disordered microstructures is substantially harder than designing regular ones. Their design remains trapped between manual parameterizations with limited expressiveness, and generative AI that is data-hungry and struggles to generalize. To address these limitations, we propose a generative design framework based on Neural Cellular Automata that dynamically grows complex microstructures through learned local interaction rules, inspired by the self-organizing processes in natural materials. This framework requires only a single training template, yet accommodates diverse disordered microstructures and adapts to irregular domains and arbitrary discretizations. By manipulating the learned local rules, we can steer the growth process to generate microstructures unseen during training, providing control over orientation, anisotropy, and directional thickness without retraining. As a dynamic, local growth process, it naturally produces spatially varying microstructures that transition smoothly to enable location-specific mechanical properties. We demonstrate this in a multiscale mechanical cloaking design, where microstructures vary across the space to meet an optimized heterogeneous property distribution. Our design enables excellent cloaking performance without complicated post-processing and incompatible assembly common in existing methods. This data-efficient, generalizable approach opens access to previously intractable disordered materials for biomedical implants and soft robotics.
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Machine Learning · Cross-listed from cs.SD
Can Tokens Compete? Token Representations against Supervised CNN Backbones for BirdCLEF+ 2026
Anthony Miyaguchi, Murilo Gustineli and Adrian Cheung
This paper details the DS@GT ARC team's approach to BirdCLEF+ 2026, multi-label detection of animal vocalizations in soundscapes from the Pantanal wetlands. The 2026 edition adds about an hour of labeled soundscapes, shifting the task toward supervised pipelines fit to the labeled set. First, we build a competitive supervised baseline that ensembles a frozen Perch v2 backbone, a trained HGNetV2-B0 sound-event-detection network, and a non-bird prototypical head, reaching a private leaderboard score of 0.936 at rank 1894 within a 90-minute CPU budget. Second, we ask whether
token-based representations can compete, contrasting codec representations from neural audio codecs against semantic representations from foundational
embeddings. We compare two bioacoustic specialist models against four
token-based encoders trained on AudioSet. The repository for this work can be found at https://github.com/dsgt-arc/birdclef-2026.
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Machine Learning
Interleaved Noise Injection Improves Clean, Corrupted, and OOD Performance
Matt L. Wiemann, Peter Melchior and Andrew K. Saydjari
Noise injection is a well-known technique in
stochastic optimization. We report its surprising effectiveness with an interleaved (on-off-on-off...) rather than the usual monotonic decay schedule. We present a theoretical analysis of noise injection, which confirms that corruption by impulse noise approximates a Jacobian regularization, whereas Gaussian noise acts as a
curvature penalty. This regularization behavior has been invoked to explain why noise injection increases model robustness. But the interleaved nature of our proposed schedule produces superior results even for the optimization objective: mixing phases of noisy data permits the optimizer to escape local minima and increase exploration without the risk of catastrophically forgetting the important features from the clean data. To stabilize this training scheme against the rapid changes of the loss when switching between clean and noisy data, we introduce a gradient-norm stabilization technique that scales noisy updates based on clean gradient magnitudes. We compare this method with other common augmentation methods and find substantial improvements in corruption tolerance and robustness to real-world distribution shifts on CIFAR-100-C, ImageNet-C, and ImageNet-R for ResNet and ViT architectures, with the best results being achieved by stacking our method on top of other augmentations. Through saliency and
attention maps we show that the effect of interleaved noise injection stems from penalizing the failure modes encouraged by the inductive bias of the models: impulse noise works against the locality bias of convolutional (ResNet) architectures, and Gaussian noise reduces the tendency of
attention-based models to pick up large-scale spurious features. Interleaved noise injection is therefore an effective tool to improve the test performance on clean, noisy, and out-of-distribution data at essentially zero computational cost.
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Machine Learning
Depth-Dependent Hidden-State Collapse in Dynamical System Autoencoders for LiDAR Point-Cloud Classification
Patricia Medina and Hy P. G. Lam
We study Dynamical System Autoencoders (DSAE) for
LiDAR point-cloud classification using spatial coordinates and Product Coefficient feature augmentations. The experiments compare separately trained DSAE architectures at encoder depths $K=1,\ldots,5$ and evaluate the resulting hidden representations with Random Forest, kNN, and a majority-class Dummy baseline. The main finding is a hidden-state collapse at $K=5$. For both xyz and xyz plus Product Coefficient inputs, the hidden-state standard deviation falls to the order of $10^{-5}$, while all three classifiers attain the same macro F1 score of $0.224688$. We prove that between-class hidden scatter is bounded by total hidden scatter, which in turn is controlled by the reported hidden-state variance. Thus a nearly constant hidden representation cannot retain substantial class-separating structure. Product Coefficients neither improve pre-collapse macro F1 nor prevent the $K=5$ collapse in the present DSAE setting. These results identify large-depth representation collapse as a concrete failure mode for DSAE
LiDAR classification.
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Machine Learning
Active Real-World Factor-Based Evaluation for Generalist Robot Policies
Andrew Liao, Hanchen Cui, Karthik Desingh et al. (+1 more)
Generalist
robot manipulation policies trained on large, diverse
datasets have shown remarkable promise across a wide range of tasks. However, rigorously evaluating these policies remains a fundamental challenge. Real-world performance depends on a large combinatorial space of task factors including object poses and camera viewpoints, making full, exhaustive evaluation intractable. Additionally, real hardware evaluation is slow and resource-intensive, so current practice is to use narrow test suites that can miss critical failure modes and misrepresent true deployment readiness. We propose an active evaluation framework that addresses this challenge by treating policy evaluation as a sequential experimental design problem. Our approach fits a probabilistic surrogate model over a structured space of task factors and adaptively selects evaluation configurations to maximize information gain over the policy's performance distribution, allowing for sample-efficient characterization of policy behavior across unseen conditions and a systematic identification of failure-prone regions. We conduct 2331 real-world evaluations across 3 tasks with 3 factor variations and find that our approach typically saves the evaluator at least 20-40% of trials compared to typical random testing.
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All authors Andrew Liao, Hanchen Cui, Karthik Desingh, Aryan Deshwal