Peer Revenue Returns subject to peer review

Papers

Fresh from arXiv, typeset properly. Highlighted words trade on the market.

Computer Science Machine Learning

cs.LG Watch Machine Learning (sign in to use)

Saturday 2 May

Machine Learning

Importance-Guided Basis Selection for Low-Rank Decomposition of Large Language Models

Low-rank decomposition is a compelling approach for compressing large language models, but its effectiveness hinges on selecting which singular-vector bases to retain for a target task. Existing methods such as Basel adapt singular-value coefficients on downstream data and prune bases with small re-learned magnitudes, a heuristic that can be misaligned with task performance because it ignores the local geometry of the loss landscape. We present Basis Selection with Importance (BSI), a principled low-rank compression framework that ranks and prunes bases by directly estimating the expected loss increase incurred when each basis is removed. BSI derives a derivative-based importance score from a second-order Taylor expansion of the task loss with respect to singular values, combining first-order sensitivity and second-order curvature to quantify pruning impact. To make this criterion practical for LLMs, we develop an efficient Hessian-diagonal estimator by adapting the Hutchinson randomized-probing method to loss curvature with symmetric parameter perturbations. We provide a comprehensive theoretical analysis, including loss-increase bounds under basis pruning, explicit propagation of Hessian-diagonal estimation error into these bounds, variance characterization tied to the Hessian spectrum, high-probability sample-complexity guarantees for achieving a target estimation accuracy, and guidance on perturbation intensity. Extensive experiments on mathematical reasoning benchmarks demonstrate that BSI consistently outperforms state-of-the-art low-rank decomposition baselines, with especially strong improvements under deep compression.
Read the full abstract

Machine Learning

PRIME: Protein Representation via Physics-Informed Multiscale Equivariant Hierarchies

Proteins are inherently multiscale physical systems whose functional properties emerge from coordinated structural organization across multiple spatial resolutions, ranging from atomic interactions to global fold topology. However, existing protein representation learning methods typically operate at a single structural level or treat different sources of structural information as parallel modalities, without explicitly modeling their hierarchical relationships. We introduce PRIME (Protein Representation via Physics-Informed Multiscale Equivariant Hierarchies), a unified framework that models proteins as a nested family of five physically grounded structural graphs spanning surface, atomic, residue, secondary-structure, and protein levels. Adjacent levels are connected through deterministic, physics-informed assignment operators, enabling bidirectional information exchange via bottom-up aggregation and top-down contextual refinement. Experiments on standard protein representation learning benchmarks demonstrate strong and competitive performance across diverse tasks, with particularly notable gains on the Fold Classification benchmark, where PRIME outperforms the strongest geometric GNN baseline by margins of 13.80 and 18.30 points on the harder Superfamily and Fold splits, and achieves a state-of-the-art accuracy of 84.10% on Reaction Class prediction, surpassing all baseline methods, including ESM. Ablation studies confirm that each structural level contributes complementary and non-redundant information, and adaptive cross-attention analysis reveals that PRIME autonomously identifies the most task-relevant structural resolutions at prediction time. Our source code is publicly available at https://github.com/HySonLab/PRIME
Read the full abstract

Machine Learning · Cross-listed from math.AT

Persistent Homology of Time Series through Complex Networks

We present a unified pipeline for univariate time series classification via complex networks and persistent homology. A time series is mapped to a graph through one of five constructions across three families (visibility (natural and horizontal visibility graphs), transition, and proximity) and the graph is converted to a dissimilarity matrix from which a Vietoris-Rips filtration yields persistence diagrams. These diagrams are vectorized into fixed-length features through persistence landscapes and topological summary statistics. By standardizing the downstream processing, differences in classification performance are attributable to the network construction and distance metric alone. Experiments on twelve UCR benchmarks show that (i) no single construction dominates: the optimal graph type depends on the signal's discriminative structure; (ii) the graph distance metric is a first-order design choice, with diffusion distance uniformly outperforming shortest-path alternatives; and (iii) persistence-based features degrade gracefully under noise, consistent with the classical stability theorem of persistent homology.
Read the full abstract

Machine Learning

From Packets to Patterns: Interpreting Encrypted Network Traffic as Longitudinal Behavioral Signals

Human behavior is difficult to observe continuously at scale, yet it leaves measurable traces in everyday device use. We test whether encrypted smartphone network traffic—a ubiquitous, always-on, passive sensing modality—can passively capture behavioral patterns related to sleep, stress, and loneliness. We model shared behavioral structure using a transformer backbone with per-user adapters, allowing the model to represent both typical individual behavior and deviations from it. To make these representations interpretable, we apply a sparse autoencoder to extract behavioral features corresponding to distinct patterns of activity. We relate these features to sleep disturbance, stress, and loneliness using generalized estimating equations with Mundlak decomposition, separating between-person differences from within-person changes over time. We find that the three outcomes reflect distinct temporal structures: stress is primarily associated with stable between-person differences, loneliness with within-person variation, and sleep disturbance with a combination of both. Notably, these within-person dynamics are not captured by predefined network-traffic features, demonstrating the value of learned representations for longitudinal behavioral sensing. These results establish encrypted network traffic as a viable passive sensing modality, revealing interpretable behavioral dynamics—particularly deviations from an individual's baseline—that are not visible in raw traffic features.
Read the full abstract

All authors Rameen Mahmood, Omar El Shahawy, Souptik Barua, Zachary Beattie, Jeffrey Kaye, Xuhai "Orson” Xu, Chao-Yi Wu, Danny Yuxing Huang

Machine Learning · Cross-listed from cs.CY

The Case for ESM3 as a General-Purpose AI Model with Systemic Risk Under the EU AI Act

Due to ambiguity in the wording of the EU AI Act, we examine the question of to what extent frontier biological foundation models such as ESM3 are subject to obligations for general-purpose AI models with systemic risk under the EU AI Act. In this paper, we map ESM3 to the biorisk chain, and conclude that it would be desirable if the providers of ESM3 and similar biological models were subject to these obligations, which would require them to assess and mitigate dual-use risks from their models. We then perform an analysis, comparing the attributes of ESM3 to the classification criteria in the AI Act and the supporting material. We conclude that at this time, ESM3 does not appear to be meaningfully regulated by the Act. We then propose remedies to correct the situation.
Read the full abstract

All authors Taro Qureshi, Jacob Griffith, Koen Holtman, Marcel Mir Teijeiro, Ze Shen Chin, Rokas Gipiškis

Machine Learning

Concepts Whisper: Spectral Anti-Concentration and the Dual Geometry of Transformer Representations

We find that transformer concept representations systematically anti-concentrate in the spectral tail of the unembedding covariance, encoding word-level concepts in low-variance directions across a 17-model core suite and an expanded set of 22 semantic concept categories, with convergent replications from three independent extraction methods. Residual-stream difference-of-means vectors anti-concentrate in all 17 models (model-level one-sample t-test, p = 3.8e-9), and remain more tail-aligned than norm-matched random directions in 13 of 17; convergent support comes from sparse autoencoder (SAE) features (p = 4.5e-19 across concepts within a model) and linear probes on Llama and Qwen. We identify a dual geometry: activation-space concept directions anti-concentrate while static unembedding-row contrasts concentrate in high-variance directions (p < 10^-4). This investigation arose from testing whether the causal inner product of Park et al. (2024) aids cross-lingual concept transport; a matched-spectrum randomization across 17 models and four language pairs finds no evidence that Whitened Causal Alignment improves over spectral regularization alone (p = 0.95). Split-injection interventions, restricted to steering strengths at which both arms remain interpretable, show the predicted interference asymmetry in four of five models (paired Cohen's d_z up to 1.19) with no significant reversal inside that regime, and POS-tag probing across eight models shows syntax preferentially encoded in the high-variance subspace in six of eight architectures, with a significant reversal in the Qwen 2.5 family. These results suggest transformers rotate semantic content into spectrally quiet regions during contextualized processing, where, in some architectures, interventions may reduce grammatical disruption relative to high-variance steering.
Read the full abstract

Machine Learning

Model Merging: Foundations and Algorithms

Modern deep learning usually treats models as separate artifacts: trained independently, specialized for particular purposes, and replaced when improved versions appear. This thesis studies model merging as an alternative paradigm: combining independently trained neural networks directly in weight space, with little or no optimization and without requiring access to the original training data. The thesis considers two main regimes. In the single-task setting, where models share an objective but differ in initialization, we introduce C$^2$M$^3$, a cycle-consistent merging algorithm based on Frank-Wolfe optimization. C$^2$M$^3$ aligns multiple networks into a shared, reference-free parameter space, making weight averaging meaningful without privileging any individual model. In the multi-task setting, where models are fine-tuned for different downstream tasks from a common pretrained initialization, we first develop a theoretical account of task vectors as approximate gradients. This explains both the effectiveness and the limitations of task arithmetic. Building on this view, we show that task vectors inherit the low-rank structure of gradients and introduce Task Singular Vectors (TSV), a decomposition that enables compression and interference reduction through TSV-Merge. We then present MASS, an input-adaptive routing method that uses TSV geometry to select task-relevant subspaces at inference time. Finally, we introduce MERGE$^3$, an evolutionary merging framework that uses Item Response Theory to reduce evaluation costs by up to 50$\times$ while preserving solution quality. Together, these contributions provide theoretical and algorithmic foundations for model merging, supporting a paradigm in which learned capabilities can be composed, reused, and extended across models.
Read the full abstract

Machine Learning · Cross-listed from stat.ME

Minimum Specification Perturbation: Robustness as Distance-to-Falsification in Causal Inference

Empirical causal claims depend on many analyst decisions, from selecting covariates to choosing estimators. Existing robustness tools summarize how results vary across these choices, but, to the best of our knowledge, do not answer: How many analyst decisions must change to reach a specification, which is a set of choices, whose confidence interval (CI) contains zero? We introduce Minimum Specification Perturbation (MSP), the smallest number of changes. MSP is small under the null, grows with effect strength and captures distance-to-falsification information that dispersion-based summaries cannot report; when making decisions under weak effects, an MSP-based rule yields lower false-positive rates than dispersion-based rules. We show that Fragility Index and MSP measure orthogonal vulnerabilities: fragility to influential observations need not imply fragility to specification choices. On the LaLonde benchmark, MSP = 1 implies that one decision change makes the CI contain zero. We further provide exact permutation calibration under randomization and characterize computation, showing tractable cases under additive structure and NP-hardness in general.
Read the full abstract

Machine Learning

Hybrid Quantum Reinforcement Learning with QAOA for Improved Vehicle Routing Optimization

Vehicle Routing Problem (VRP) is one of the most complex NP-hard combinatorial optimization problem in transportation and logistics that requires a dynamic solution approach. In this paper we present a new hybrid approach that combines the Quantum Approximate Optimization Algorithm (QAOA) into the QRL policy network, instead of the usual variational layers, QAOA mixing and cost Hamiltonian layers. This enhancement enables the agent to exploit problem specific particular quantum correlations when learning policies, and so richer exploration of the routing solution space. The QAOA-augmented QRL framework shows quicker convergence in training and can tackle larger VRP instances that are beyond the reach of Grover's Adaptive Search (GAS) and Quantum Reinforcement Learning (QRL) approaches. Experiments on standard VRP instances demonstrate better solutions, fewer episodes to converge and good memory usage on near term quantum hardware simulators. These findings demonstrate QAOA- integrated QRL as a viable approach to scalable, high quality quantum-assisted combinatorial optimization.
Read the full abstract

All authors T. Satyanarayana Murthy, B. Swathi Sowmya, Santhosh Voruganti, Sai Varshini Giridi, Chaitanyya Pratap Agarwal, Vanteddu Akshitha

Machine Learning · Cross-listed from cs.SE

Feedback-Normalized Developer Memory for Reinforcement-Learning Coding Agents: A Safety-Gated MCP Architecture

Large language model (LLM) coding agents increasingly operate over repositories, terminals, tests, and execution traces across long software-engineering episodes. Persistent memory is useful, but static vector stores or generic retrieval-augmented generation (RAG) are insufficient for reinforcement-learning (RL) code development, where small details can alter Bellman targets, terminal masks, gradient flow, or validation claims. This paper presents RL Developer Memory, a local-first, Model Context Protocol (MCP)-native developer-memory architecture for RL coding agents. It treats memory selection as a logged contextual decision process: issue_match ranks candidates and records telemetry, issue_feedback maps raw labels to bounded rewards, and issue_record_resolution links verified resolutions to earlier retrieval events. A deterministic ranker remains deployed, while a contextual-bandit residual policy runs in shadow mode and can affect canary behavior only through conservative off-policy-evaluation (OPE) gates. RL/control memories require theory-to-code metadata and review-gated governance. The system is evaluated on a deterministic 200-case benchmark with RL algorithm bugs, hard negatives, review-gated RL/control cases, and low-risk failures. In the same-commit comparison, deterministic control and full shadow/OPE both achieve 80.0% expected-decision accuracy and 100.0% hard-negative suppression; the full configuration adds learning telemetry rather than accuracy gain. Static validation passed 11/11 checks; dynamic integration passed 10/10 cases. The evidence reports limits: active learned-policy deployment and official-client MCP interoperability are unsupported, live full-configuration latency regresses, and 40 residual non-RL failures remain. The contribution is an auditable memory-control architecture with explicit claim boundaries, not a universal coding-agent improvement claim.
Read the full abstract

Machine Learning · Cross-listed from econ.EM

Hall-Like Transversal Stress and Sandpile Criticality on Real Production Networks

This paper develops a Hall-Sandpile model of economic instability that combines a Hall-like transversal stress mechanism with sandpile threshold dynamics on a real production-network substrate. In analogy with the physical Hall effect, where exposed flows under an external field generate stress in a transversal direction, we model economic shocks as fields that act on flow-intensive, low-redundancy, low-capacity nodes and produce systemic stress through a multiplicative conversion function. The accumulated stress drives a discrete toppling rule and an avalanche dynamics whose effective activation threshold declines with transversal exposure. The model is calibrated on annual World Input–Output Database (WIOD) production networks for 2000–2014 and simulated on the 2014 substrate (2{,}283 country–sector nodes) under three alternative propagation normalisations to avoid mechanical near-criticality from row-stochastic operators. Controlled Monte Carlo experiments over external field intensity and redundancy stress generate four ordered regimes: stable absorption, latent fragility, critical transition, and avalanche regime. Mean avalanche size and the probabilities of finite-size systemic events $\Pr(S\!\geq\!5)$, $\Pr(S\!\geq\!10)$ and $\Pr(S\!\geq\!20)$ rise jointly with field intensity and redundancy stress. Tail diagnostics show regime-dependent thickening of the avalanche distribution, but the estimated tail indices remain too high to interpret as evidence of universal power-law criticality. The contribution is therefore a finite-size, real-network description of how transversal stress activates structural fragility, not a claim of self-organised criticality in the global economy.
Read the full abstract

Machine Learning

ECG-biometrics-bench: A Unified Framework for Reproducible Benchmarking of ECG Biometrics

Electrocardiogram (ECG) biometrics have emerged as a promising modality for continuous, liveness-aware authentication in wearable systems. However, many prior studies report overly optimistic results due to data leakage (e.g., random splits within the same session). To address this issue, we introduce ECG-biometrics-bench, a modular, reproducible benchmarking framework that standardizes preprocessing, segmentation, and evaluation across seven widely used public ECG datasets spanning clinical, ambulatory, and large-scale cohort settings. The framework supports both closed-set and open-set (i.e., subject-disjoint generalization in this work) evaluation, as well as progressively realistic protocols including cross-session and long-term temporal separation. To facilitate reproducible research in the community, the ECG-biometrics-bench repository will be made publicly accessible on GitHub upon the acceptance of this manuscript. Through a comprehensive multi-dataset analysis, we expose the Random Split Fallacy, demonstrating that intra-session evaluation protocols artificially inflate performance while masking severe degradation caused by temporal drift and unseen identities. Furthermore, by evaluating multiple architectures, including DeepECG, ResNet1D, and CNN-LSTM, we show that these failures are not model-specific but are likely inherent to current supervised feature-learning paradigms. Finally, we demonstrate that performance degradation due to temporal aging can be partially mitigated through a heavy enrollment, lightweight authentication strategy based on dynamic multi-session template fusion. These findings establish a more realistic baseline for ECG biometrics and highlight critical challenges that must be addressed for reliable real-world deployment.
Read the full abstract

Machine Learning

Mesh Based Simulations with Spatial and Temporal awareness

Machine Learning surrogates for Computational Fluid Dynamics (CFD), particularly Graph Neural Networks (GNNs) and Transformers, have become a new important approach for accelerating physics simulations. However, we identify a critical bottleneck in the field: while architectures have advanced significantly, the common underlying training paradigms remain bound to naive assumptions, such as node-wise supervision and explicit Euler time-stepping. These legacy choices ignore the stiff dynamics and local flux continuity inherent to numerous partial differential equations resolution methods, such as Finite Element, Difference, or Volume (FEM). In this work, we propose a unified framework to bridge the gap between geometric deep learning and rigorous numerical analysis. We introduce three key innovations: (1) Multi Node Prediction, a stencil-level objective that predicts field values for a node's full local topology, enforcing spatial derivative consistency; (2) Temporal Correction, replacing unstable explicit schemes with a predictor-corrector via temporal Cross-Attention; and (3) Geometric Inductive Biases, leveraging 3D Rotary Positional Embeddings (RoPE) to robustly capture rotational symmetries in unstructured meshes. We evaluate this framework across three architectures (MeshGraphNet, Transolver, and a Transformer) on diverse physics datasets. Our approach yields consistent improvements in accuracy and stability, particularly in long-horizon rollouts, while producing latent representations that generalize to unseen subtasks such as Wall Shear Stress or Pressure prediction. Code is available at https://github.com/DonsetPG/graph-physics.
Read the full abstract

Machine Learning

ProMORNA: An End-to-End Generative Framework for Full-Length mRNA Design

Designing therapeutic messenger RNA (mRNA) requires generating full-length transcripts that optimally balance intracellular stability and translation efficiency. While generative models have advanced mRNA design, existing approaches rely on region-wise generation, expensive inference-time search, or target-specific model updates. To overcome these limitations, we introduce ProMORNA, a zero-shot, end-to-end generative framework for full-length mRNA design. ProMORNA aligns the design process with modern Large Language Model training pipelines: it utilizes a BART-style architecture pre-trained on over 6 million natural protein-mRNA pairs, followed by a two-stage post-training process comprising cold-start supervised fine-tuning and multi-objective reinforcement learning. By standardizing and aggregating relative advantages at the individual metric level with domain-specific stabilization, our post-training stage directly aligns the generative policy with conflicting biological constraints while avoiding direct scalarization of raw objective scores. In silico evaluations demonstrate that ProMORNA pushes the Pareto frontier of predicted stability and translation efficiency beyond standard baselines and GEMORNA, a leading state-of-the-art method. In three independent in vitro Fluc2P experiments, Candidate 2 achieved a 12-72h reporter-activity AUC 3.33 times that of the conventional Benchmark (Holm-adjusted $P=0.01285$), while its estimated 1.29-fold advantage over the reported best GEMORNA candidate remained exploratory. These results support ProMORNA as a promising framework for generating functionally active full-length mRNA candidates.
Read the full abstract

All authors Zixi Shao, Tao Wang, Ye Shen, Tianyi Huang, Yibei Xiao

Machine Learning · Cross-listed from stat.ML

Stabilizing Private LASSO under Heterogeneous Covariates via Anisotropic Objective Perturbation

We study high-dimensional LASSO under differential privacy via objective perturbation with heterogeneous covariate scales. In practical scenarios, covariates often exhibit diverse scales; however, standard preprocessing is problematic under privacy constraints, as it consumes additional privacy budget. This heterogeneity induces effective anisotropy in the objective perturbation via the inverse Gram matrix of covariates, which can degrade the stability and accuracy of algorithms. To address this, we propose a Gram-based anisotropic objective perturbation, a “pre-distortion" strategy that counteracts the distortion from the covariate structure to restore isotropy in the estimation process. Using an Approximate Message Passing (AMP) framework and state evolution analysis, we demonstrate that our proposed perturbation significantly stabilizes convergence and improves both statistical efficiency and privacy performance compared to standard uniform noise injection. Our results provide theoretical insights into designing stable and efficient private estimators without relying on data-dependent preprocessing.
Read the full abstract

Machine Learning · Cross-listed from cs.CV

CGFformer: Cluster-Guidance Frequency Transformer for Pansharpening

Pansharpening aims to generate high-resolution multispectral (HRMS) images by fusing low-resolution multispectral (LRMS) images with high-resolution panchromatic (PAN) images. However, the current mainstream frequency-based pansharpening methods employ fixed frequency filters, which cannot precisely adapt to complex and spatially diversified frequency distributions in PAN and MS images. Furthermore, existing denoising strategies insufficiently exploit frequency components for denoising and struggle to suppress various noise types accurately. To address these challenges, we propose CGFformer, a cluster-guidance frequency Transformer that focuses on varying frequency distribution and interactions between frequency and spatial components. Specifically, we design an adaptive separation module that integrates local features and non-local information through K-means clustering, enabling more precise separation of high- and low-frequency components. Subsequently, we introduce a dual-stream refinement module combined with Transformer-based cross-attention to remove various noise, allowing the network to jointly suppress frequency-relevant and irrelevant disturbances. In addition, we develop a frequency-spatial fusion module designed to enhance detail and facilitate spatial-frequency interaction, ensuring more effective reconstruction of spatial structures in the fused results. Extensive experiments on multiple benchmark datasets demonstrate that the proposed CGFformer achieves notable improvements over existing pansharpening approaches.
Read the full abstract

All authors Zijian Zhou, Jianing Zhang, Kai Sun, Xiangyu Zhao, Chunxia Zhang, Xiangyong Cao

Machine Learning

Evaluating LLMs on Large-Scale Graph Property Estimation via Random Walks

With the rapidly improving reasoning abilities of Large Language Models (LLMs), there is also a rising demand to use them in a wide variety of domains. This brings about the need to carefully evaluate the limits of the capabilities of these models with various tests and benchmarks. Graph structures are ubiquitous in real-world data, and are often used to represent and analyze relationship patterns within data. Many benchmarks have already been proposed in the graph literature to test the reasoning ability of LLMs to follow and execute graph algorithms. However, due to the limited context length of LLMs, these benchmarks consist of very small graphs. In real-world data, the size of graphs can be significantly larger, and in many cases, not fully accessible. In this paper, we examine a class of problems that arises with very large graphs having limited accessibility. We propose a large graph benchmark dataset, EstGraph, and introduce four distinct tasks designed to estimate large graph properties. We evaluate the reasoning abilities of LLMs on these tasks using a wide variety of graph datasets. In addition, we provide task-specific prompt constructions based on random walk sampling of large graphs (up to millions of nodes) that effectively convey sufficient information to LLMs within the limits of context length.
Read the full abstract

Machine Learning · Cross-listed from cs.CV

LIE: LiDAR-only HD Map Construction with Intensity Enhancement via Online Knowledge Distillation

Online High-Definition (HD) map construction is a key component of autonomous driving. Recent methods rely on multi-view camera images for cost-effective HD map segmentation, but cameras lack depth information for accurate scene geometry. In contrast, LiDAR provides precise 3D measurements but lacks dense semantic cues. In this work, we propose LIE, LiDAR-only semantic map construction method that employ Knowledge Distillation (KD) to handle the lack of dense semantic and texture cues. Specifically, the teacher branch fuses student LiDAR features and the corresponding 2D intensity map tile to provide dense supervision for segmenting map elements using online distillation scheme. Experimental results show that our method outperforms all single-modality approaches, achieving 8.2% higher mIoU than the state-of-the-art camera-based model on nuScenes. LIE is robust over long ranges and under challenging weather and lighting, and efficiently adapts to Argoverse2 with only 10% fine-tuning, surpassing camera-based models trained on the full dataset. Source code will be available \href{https://iv.ee.hm.edu/lie/}{here}.
Read the full abstract

Machine Learning · Cross-listed from cs.CV

SplAttN: Bridging 2D and 3D with Gaussian Soft Splatting and Attention for Point Cloud Completion

Although multi-modal learning has advanced point cloud completion, the theoretical mechanisms remain unclear. Recent works attribute success to the connection between modalities, yet we identify that standard hard projection severs this connection: projecting a sparse point cloud onto the image plane yields an extremely sparse support, which hinders visual prior propagation, a failure mode we term Cross-Modal Entropy Collapse. To address this practical limitation, we propose SplAttN, which replaces hard projection with Differentiable Gaussian Splatting to produce a dense, continuous image-plane representation. By reformulating projection as continuous density estimation, SplAttN avoids collapsed sparse support, facilitates gradient flow, and improves cross-modal connection learnability. Extensive experiments show that SplAttN achieves state-of-the-art performance on PCN and ShapeNet-55/34. Crucially, we utilize the real-world KITTI benchmark as a stress test for multi-modal reliance. Counter-factual evaluation reveals that while baselines degenerate into unimodal template retrievers insensitive to visual removal, SplAttN maintains a robust dependency on visual cues, validating that our method establishes an effective cross-modal connection. Code is available at https://github.com/zay002/SplAttN.
Read the full abstract

Machine Learning · Cross-listed from stat.ME

Stable Localized Conformal Prediction via Transduction

Existing evaluations of conformal prediction, such as prediction efficiency and test-conditional coverage, are defined in expectation over the calibration data. In practice, when only one calibration set of limited size is available, prediction sets often exhibit high variability in size, especially for methods with localization. We formalize this concern as set stability, defined as the variance of the conditional expectation of the set size given the calibration data. To improve stability without requiring additional target-task labels, we propose Stable Conformal Prediction (StCP), a transfer learning approach that utilizes labeled source-task data and unlabeled target data. Theoretically, we characterize the marginal coverage and stability of StCP; empirically, it delivers more stable prediction sets than standard conformal prediction methods, especially for those with localization, when calibration data are limited.
Read the full abstract

Machine Learning · Cross-listed from cs.AI

SCALE-LoRA: Auditing Post-Retrieval LoRA Composition with Residual Merging and View Reliability

Libraries of Low-Rank Adaptation (LoRA) adapters are becoming a practical by-product of parameter-efficient adaptation. Once such adapters accumulate, a natural question is no longer how to train one adapter for one task, but how to reuse an open pool of adapters for a new task given only a small support set. Prior work has shown that LoRA modules can be composed at the task level and dynamically selected at the instance level. However, open-pool LoRA reuse is not automatic: retrieving relevant adapters does not guarantee that their parameter updates are compatible, and composing adapters does not guarantee reliable outputs. We introduce the Sparse-Composition Agreement Layer (SCALE), a post-retrieval audit and composition framework for open-pool LoRA reuse. SCALE contains a deployable 1.0* merge path, Layer-Adaptive Sparse Residual Composition (LASRC), and a higher-cost reliability-analysis layer for multi-view disagreement. LASRC addresses merge interference by preserving a linear anchor while residualizing block-wise adapter update directions. The reliability layer treats disagreement among sparse composition views as an observable uncertainty signal and compares agreement, support-loss proxy selection, and oracle headroom under explicit path cost. In matched FLAN-T5-Large, BIG-Bench Hard (BBH), and 97-LoRA experiments, LASRC gives a directional single-view gain under fixed retrieval, while SCALE-support is reported as a query-label-free 3.0* reliability-analysis variant rather than as a calibrated or throughput-equivalent selector. Protocol-distinct BBH-8 validation shows the same qualitative trend on three decoder-only backbones. Detailed scores, paired audits, and path-cost records are reported in the experimental section.
Read the full abstract

Machine Learning

Barriers to Counterfactual Credit Attribution for Autoregressive Models

Generative AI disrupts the practice of giving credit to work that came before. Ideally, a generative model would give credit to any work on which its output depends in a significant way. Counterfactual credit attribution (CCA) is a technical condition formalizing this goal–a relaxation of differential privacy–recently introduced by Livni, Moran, Nissim, and Pabbaraju [2024] who studied it in the PAC learning setting. We initiate the study of CCA generative models. Specifically, we consider autoregressive models giving credit to a deployment-time dataset (e.g., a RAG database). We uncover barriers to two natural approaches to CCA autoregressive models. First, we show that imposing CCA on the underlying next-token predictor does not guarantee that the model is CCA: CCA does not compose autoregressively (unlike DP). Second, we consider a different approach to building CCA models which we call retrofitting. Retrofitting takes a model that does not attribute credit, and adds credit onto it. We prove a lower bound for CCA retrofitting under a weak optimality requirement. Given black-box access to the starting model, retrofitting requires query complexity exponential in the length of the model's outputs.
Read the full abstract

Machine Learning

Quantifying Multimodal Capabilities: Formal Generalization Guarantees in Pairwise Metric Learning

Multimodal learning leverages the integration of diverse data modalities to enhance performance in complex tasks. Yet, it frequently encounters incomplete or redundant modality data in real-world scenarios. This paper presents a fine-grained theoretical analysis of the generalization properties of multimodal metric learning models, addressing critical gaps in understanding the relationship between modality selection and algorithmic performance. We establish hierarchical relationships between function classes corresponding to different modality subsets and quantify the discrepancy between learned mappings and ground truth. Through rigorous analysis of pairwise complexity within the multimodal learning framework, we derive novel generalization error bounds that reveal the joint impact of modality quantity and granularity on model performance. Our theoretical findings on both upper and lower bounds demonstrate that incorporating fine-grained modality features reduces the complexity of the hypothesis space by enhancing modality complementarity. This work offers both theoretical foundations and practical implications for improving convergence rates and accuracy in multimodal learning systems.
Read the full abstract

Machine Learning

Rethinking Multi-Label Node Classification: Do Tuned Classic GNNs Suffice?

Multi-label node classification (MLNC) has recently been addressed by increasingly complex label-aware designs that explicitly model node-label interactions and inter-label dependencies.However, it remains unclear whether the advantages of these methods truly stem from their specialized designs, or simply from insufficiently optimized baselines. In this paper, we revisit MLNC from a strong-baseline perspective and investigate whether carefully tuned classic full-graph GNNs can already serve as strong solutions to this task. We systematically study several representative backbones, including GCN, SSGConv, and GCNII, and optimize them using standard yet effective techniques such as normalization, dropout, and residual connections. Experiments on five representative benchmark datasets show that our tuned baselines outperform representative specialized methods on four datasets and achieve state-of-the-art performance in multiple settings. These results indicate that careful tuning of classic backbones is a highly influential but often overlooked factor in MLNC, and highlight the need for more rigorous strong-baseline evaluation in future research on multi-label graph learning.
Read the full abstract

Machine Learning · Cross-listed from cs.CL

Injecting Distributional Awareness into MLLMs via Reinforcement Learning for Deep Imbalanced Regression

Multimodal large language models (MLLMs) struggle with numerical regression under long-tailed target distributions. Token-level supervised fine-tuning (SFT) and point-wise regression rewards bias learning toward high-density regions, leading to regression-to-the-mean behavior and poor tail performance. We identify the lack of cross-sample relational supervision as a key limitation of existing MLLM training paradigms. To address it, we propose a distribution-aware reinforcement learning framework based on Group Relative Policy Optimization, which introduces batch-level comparison-based supervision via the Concordance Correlation Coefficient-based reward to align predicted and ground-truth distributions in terms of correlation, scale, and mean. The framework is plug-and-play, requiring no architectural modification. Experiments on a unified suite of long-tailed regression benchmarks show consistent improvements over SFT and existing MLLM regression methods, with particularly strong gains in medium- and few-shot regimes.
Read the full abstract

Machine Learning

Sequential Learning and Catastrophic Forgetting in Differentiable Resistor Networks

Differentiable physical networks provide a simple setting in which learning can be studied through the interaction between trainable parameters and physical equilibrium constraints. We investigate sequential learning in differentiable resistor networks governed by Kirchhoff's laws. Although individual input–output mappings can be learned by gradient-based adjustment of edge conductances, sequential training on conflicting tasks produces catastrophic forgetting. We show that forgetting is controlled by task conflict and by the degree of adaptation to the new task. Uniform anchoring and normalised gradient-weighted anchoring reduce forgetting only by increasing the final loss on the new task, giving a clear forgetting–adaptation trade-off. We also show that forgetting is associated with localised conductance changes on high-current edges, giving a physical interpretation as reconfiguration of dominant transport pathways. Broader random-task ensembles show that the strongest forgetting occurs when the second task reverses the output ordering imposed by the first task. Finally, comparisons across Erdős–Rényi, small-world, scale-free, and random-geometric graph ensembles show that topology changes the forgetting–adaptation balance. These results position differentiable resistor networks as compact, physically interpretable testbeds for studying continual learning in tunable matter.
Read the full abstract

Machine Learning · Cross-listed from cs.CL

A framework for analyzing concept representations in neural models

Understanding how neural models represent human-interpretable concepts is challenging. Prior work has explored linear concept subspaces from diverse perspectives, such as probing and concept erasure. We introduce a unified framework to study these subspaces along two axes: containment, which tests if a concept is fully represented in a subspace but not outside it, and disentanglement, which tests for isolation from other concepts. In experiments on both text and speech models, we first highlight that concept subspaces may not be uniquely determined, and discuss the implications for concept subspace analysis. Then, we compare properties of concept subspaces estimated using five estimators, proposed in different communities. We find that (1) the choice of estimator impacts the containment and disentanglement properties; (2) the state-of-the-art concept erasure method, LEACE, performs well on both testing axes, but still struggles to generalize to unseen data; and (3) in HuBERT speech representations, phone information is both contained and disentangled from speaker information, while speaker information is hard to contain in a compact subspace, despite being disentangled from phones.
Read the full abstract

Machine Learning · Cross-listed from eess.SP

MU-SHOT-Fi: Self-Supervised Multi-User Wi-Fi Sensing with Source-free Unsupervised Domain Adaptation

Deep learning has been widely adopted for WiFi CSI-based human activity recognition (HAR) due to its ability to learn spatio-temporal features in a privacy-preserving and cost-effective manner. However, DL-based models generalize poorly across environments, a challenge amplified in multi-user settings where overlapping activities cause CSI entanglement and domain shifts. Practical deployments often limit access to labeled source data due to privacy constraints, motivating source-free adaptation using only unlabeled target-domain CSI and a pre-trained source model. In this paper, we propose MU-SHOT-Fi, a source-free unsupervised domain adaptation framework for single- and multi-user Wi-Fi sensing. MU-SHOT-Fi employs permutation-invariant set prediction with Hungarian matching during source training, followed by frozen-classifier backbone adaptation in the target domain. To enable stable adaptation without labels, we introduce occupancy-weighted information maximization that prevents model collapse by focusing diversity regularization on likely-occupied slots while excluding the dominant class from marginal entropy. Additionally, we employ binary rotation prediction as spatial self-supervision that exploits CSI frequency-time structure to learn domain-invariant features. For single-user scenarios, we introduce SU-SHOT-Fi by replacing occupancy weighting with standard information maximization and incorporating contrastive predictive coding to exploit temporal consistency. Extensive experiments on the WiMANS and Widar 3.0 datasets across cross-environment, cross-frequency, cross-orientation, and combined domain shifts demonstrate that MU-SHOT-Fi effectively recovers multi-user exact-activity classification performance under large domain shifts while maintaining accurate occupancy estimation and preventing collapse toward dominant classes.
Read the full abstract

Machine Learning · Cross-listed from quant-ph

From Characterization To Construction: Generative Quantum Circuit Synthesis from Gate Set Tomography Data

High-fidelity circuit execution on noisy intermediate-scale quantum devices is bottlenecked by compilation pipelines that disregard complex, correlated noise. To address this, this methodology article proposes a quantum machine learning control (QMLC) framework for generative quantum circuit synthesis from gate-set tomography (GST) data that bypasses the traditional two-step pipeline of characterizing native quantum gates via GST followed by unitary decomposition algorithms. Instead, a generative concept space is directly learnt from GST data, enabling conditional synthesis of quantum circuits on a desired output distribution. Our approach tokenizes GST germ circuits and embeds them into a structured latent space using a curriculum-learning-motivated strategy, starting with short circuits and progressively incorporating longer ones with diverse output statistics. The embedded sequences are processed by a set-vision transformer with permutation-invariant pooling, producing k-seed vectors that represent the learned concept space of the quantum device. Aggregating data across multiple circuits makes this latent representation inherently context-aware, capturing the shared physical noise environment (e.g., crosstalk, drift) that isolated gate metrics miss. We propose an unconditional diffusion model to sample from the concept space. During inference, a user provides a target measurement distribution, and the model generates a corresponding circuit. To ensure fidelity and robustness, the output is denoised using a diffusion model that operates on the target conditional covariance matrix. This end-to-end framework is a step towards context-aware, hardware-native circuit synthesis directly from raw GST data, which offers a new paradigm for integrating quantum control and compilation. The QMLC framework is particularly suited for near-term quantum devices with complex calibration procedures.
Read the full abstract

All authors King Yiu Yu, Aritra Sarkar, Erbing Hua, Maximilian Rimbach-Russ, Ryoichi Ishihara, Sebastian Feld

Machine Learning

Toward a foundational thermal model for residential buildings

The building energy community lacks a foundational thermal model, i.e., a single pretrained model capable of generalizing across diverse buildings, climates, and control strategies without building-specific calibration. Achieving this vision requires architectural principles that capture universal thermal dynamics rather than memorizing building-specific patterns. We take a step toward this goal by presenting a physics-informed transformer architecture that embeds domain knowledge, e.g., derivative enrichment and Euler-based numerical integration, into a decoder-only framework. We incorporate static building features extracted from simulation models and employ Rotary Position Embedding attention to capture temporal dependencies. Evaluated on the CityLearn dataset spanning 247 residential buildings across three climate zones, our model achieves one-step prediction accuracy (RMSE of 0.30{\deg}C in Texas, 0.29{\deg}C in Vermont) while outperforming both traditional baselines and fine-tuned Time-Series Foundation Models. We also demonstrate zero-shot transferability: models trained on as few as two buildings generalize to unseen buildings and climate zones without fine-tuning. Despite the limitation of simulated residential buildings, our results establish physics-informed architectural principles as a promising foundation for universal building thermal models.
Read the full abstract

All authors Ting-Yu Dai, Kingsley Nweye, Dev Niyogi, Zoltan Nagy