Statistics Applications · Cross-listed from cs.CV
Multi-View Structure-from-Motion Enables Oriented Projective Shape Analysis in Three Dimensions
Musab Alamoudi, Robert L. Paige and Vic Patrangenaru
Projective shape analysis provides a
geometric framework for studying landmark configurations in digital images acquired by pinhole cameras. In the classical projective shape (PS) model, three-dimensional configurations ($k$-ads) are represented as points in $(\mathrm{RP}^3)^q$, $q = k - 5$. A nonparametric test is developed in Patrangenaru et al. [12], for this framework, to determine whether an object matches a design blueprint, with each configuration reconstructed from a single uncalibrated stereo pair. Such two-view reconstructions are identified only up to a 3D projective transformation, which may reverse orientation, so that the sign-blind PS summary was the only available, before oriented projective shape (OPS) was recently considered. Multi-view Structure-from-Motion (SfM) technology removes this obstruction: its bundle adjustment is identified up to an orientation-preserving projective transformation. In this paper we revisit a well-cited three-cube object, from Patrangenaru et al. [12], with $n = 8$ SfM reconstructions built in Agisoft Metashape Professional 2.3.0, and validate our implementation by reproducing the published stereo construction from the original data. This allows us to perform what is to the best of our knowledge the first three-dimensional OPS analysis, compute its extrinsic total-variance index and perform statistical inference in this novel setting. Due to the high concentration of SfM data, the OPS index is asymptotically one-half the PS index, a structural consequence of concentration rather than a property of the object. Here our blueprint hypothesis is not rejected for any of the $q = 14$ non-frame landmarks, while the SfM reconstructions are about 26 times more concentrated than the stereo ones, a substantial gain in reconstruction precision. Sample-size, photograph-count, and frame-ordering analyses support the robustness of these conclusions.
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Statistics Applications
Pre-game paired-comparison modeling of professional League of Legends map outcomes
Min-Ren Guan and Shen-Ning Tung
We build and evaluate a pre-game win-probability forecaster for individual maps (“games”) in professional League of Legends (LoL). The proposed model is a one-stage logistic regression fit end-to-end on the win/loss log-loss: each team's exponentially-weighted moving average of past same-side results, a ridge-shrunk stable strength that is the maximum-a-posteriori estimate of a logistic mixed model, and a first-pick draft
covariate, natively calibrated out of sample (walk-forward slope $0.995$). It augments a purely dynamic Bradley–Terry specification with stable team strengths. A second, independently built two-stage composite mixed model under restricted maximum likelihood (REML) and best linear unbiased prediction (BLUP) shrinkage, with Platt calibration, serves as the strongest rival the authors could build. On $5{,}135$ games across six regional leagues and three international events (2024–2026), under paired per-game Diebold–Mariano inference, the two architectures are statistically indistinguishable on every protocol and window (global holdout $0.2230$ vs.\ $0.2257$; walk-forward $0.2207$ vs.\ $0.2215$), so the simpler model is preferred on parsimony, not accuracy; both improve on the classical dynamic
benchmark ($0.2351$) by a clear margin and on the static fits ($0.2301$/$0.2268$) more modestly. Against Polymarket on $928$ matched maps, the forecasts are statistically indistinguishable from the
market on its own per-game contracts, with a modest
market edge concentrated on cross-region Worlds and series-decider maps.
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Statistics Applications · Cross-listed from cs.AI
When Can LLM Digital Twins Reduce Human Measurement? From Behavioral Fidelity to Statistical Substitutability
Steven Wang, Kyle Hunt, Shaojie Tang et al. (+1 more)
LLM-based digital twins promise to reduce repeated human data collection by generating person- specific responses, yet existing evaluations provide little evidence about whether they can reduce human measurement while preserving valid inference. To address this, we introduce statistical substitutability, an inferential criterion that evaluates the extent to which twin predictions can reduce human measurement for a particular estimand while preserving valid inference. We develop a framework, grounded in mixed-subject and prediction-powered inference, that evaluates statistical substitutability along four dimensions: aggregate fidelity, paired respondent-level signal, finite-sample human-label recovery, and stability across populations. Across two empirical evaluations spanning behavioral experiments, multiple models, and alternative respondent representations, we find that digital twins can reproduce average human effects while providing little information about which individuals differ from those averages. Newer models and richer respondent information improve some dimensions of performance but do not reliably translate into human-data savings. Human calibration can reduce aggregate prediction error, yet limited labeled samples often fail to produce stable precision gains. Importantly, these findings demonstrate that behavioral fidelity is neither necessary nor sufficient for statistical substitutability. More broadly, they suggest that AI-generated evidence should be evaluated based on its ability to support valid scientific inference rather than its ability to reproduce human outcomes alone. Digital twins should therefore be judged for confirmatory use by whether they reduce uncertainty about human quantities, not merely by whether they reproduce human means, distributions, or effects.
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All authors Steven Wang, Kyle Hunt, Shaojie Tang, Kenneth Joseph
Statistics Applications · Cross-listed from astro-ph.IM
Neural Posterior Estimation for Tomographic Weak Lensing Mass Mapping
Tim White, Shreyas Chandrashekaran, Camille Avestruz et al. (+2 more)
Weak gravitational
lensing shear and convergence trace the distribution of baryonic and dark matter across space, making them a powerful probe of
cosmic structure. Inferring shear and convergence from images is a challenging inverse problem. The prevailing approach to this task estimates shear from weighted averages of
galaxy ellipticities, calibrates these estimates to account for systematic biases, and transforms them to reconstruct convergence, a multistage procedure that requires substantial computational resources and meticulous handling of statistical uncertainties. As an alternative, we propose a probabilistic approach to field-level weak
lensing inference in which we train a deep neural network to directly map a multiband image to a variational distribution over the underlying tomographic shear and convergence fields. This neural posterior estimation (NPE) procedure implicitly marginalizes over nuisance variables in the cosmological forward model and does not require evaluating the likelihood function. It is also amortized, so it enables rapid posterior inference for astronomical surveys once the neural network is trained. When evaluated on synthetic images from the LSST-DESC DC2 Simulated Sky Survey, NPE produces well-calibrated variational distributions for shear and convergence that are consistent with the ground truth. We describe how maps sampled from these variational distributions could be used in a subsequent simulation-based inference procedure to approximate the posterior distribution over cosmological parameters.
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All authors Tim White, Shreyas Chandrashekaran, Camille Avestruz, Jeffrey Regier, the LSST Dark Energy Science Collaboration
Statistics Applications
Two-resolution state modelling of intermittent online gambling activity during Sweden's temporary deposit-cap period
Sam Andersson, Timo Koski, Helga Westerlind et al. (+3 more)
Intermittent online gambling records create two distinct representation problems: calendar-time analyses must retain represented days with no recorded play, whereas analyses of active behaviour must preserve variation within active episodes. We pair calendar-time and active-bout models in a two-resolution analysis of 14.2 million player-days from a single operator during 2019-2023. The calendar-time layer retains assignable represented days in five observed categories and propagates a pre-period reference. The active-episode layer fits a
Bayesian mixed-emission hidden semi-Markov model to turnover, playing time, approved deposits and session counts. In the reference four-regime fit, two regimes share a rounded model-implied turnover median of 153.5 EUR, while their model-implied playing-time and approved-deposit medians differ by factors of 4.6 and 5.7, respectively, and their expected total session counts by a factor of 2.8. This separation remains under an ordinary hidden Markov model, two routing perturbations and a residual-dependence sensitivity; the tested turnover-only fits were diagnostically unstable. Over the temporary Swedish deposit-cap period, deposits and turnover per represented player-day were roughly 55% below the propagated reference and active-category occupancy was 7.8% lower. The largest negative deviations in a prespecified Sweden-assigned cohort occurred among high pre-policy deposit-intensity customers. These are operator-specific descriptive comparisons, not causal policy effects.
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All authors Sam Andersson, Timo Koski, Helga Westerlind, Keenan Lyon, Per Carlbring, Olof Molander
Statistics Applications · Cross-listed from stat.ME
Modeling Brain MRI Using Persistent Homology and Multilevel Functional Data Analysis
Shashipraba N. K. Rajakaruna, Asim K. Dey and A. Alexandre Trindade
Persistent homology provides a multiscale representation of biomedical images by capturing higher-order topological features that reflect their underlying structural organization. However, the resulting topological summaries are typically used as predictors or features for classification and group comparisons rather than treated as primary variables of interest. We construct a generalized multilevel functional framework for analyzing persistent-homology summaries as longitudinal functional responses in repeated three-dimensional structural
magnetic resonance imaging (MRI). Specifically, we represent topological features using Betti curves and model these curves as count-valued functional responses. A negative-binomial distribution accommodates the discrete and potentially overdispersed nature of Betti counts, while the multilevel formulation accounts for the dependence induced by repeated measurements and separates between-subject and within-subject sources of functional variation. Functional principal component analysis further evaluates the dominant modes of variation at each level. A
Bayesian approach is used for joint estimation of the functional regression and multilevel functional principal components. We apply this modeling framework to longitudinal structural MRI data from the OASIS-2 study to investigate associations between
brain topology and demographic and clinical characteristics, including age, gender, follow-up time, and dementia severity. The results demonstrate that the framework can capture
covariate-associated variation across the filtration continuum while evaluating distinct sources and patterns of longitudinal variation across homology dimensions.
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Statistics Applications
Structural Analysis of a Dynamic Multilayer Network via Matrix Autoregressive Models: A Case Study of International Interactions between Countries
Camila Pinzón, Mario Arrieta and Juan Sosa
Dynamic and multilayer networks have been widely studied separately, but their joint analysis remains comparatively underdeveloped. Because the relational information of a dynamic multilayer network can be represented as a tensor at each time point $t$, each layer can be summarized through a set of structural statistics, yielding a
matrix-valued observation and, consequently, a
matrix-valued time series. To exploit this structure, we propose the use of
matrix autoregressive (MAR) models, which simultaneously characterize temporal dependence across relational layers and structural statistics. We apply this framework to the ICEWS
dataset, which records international interactions among countries under four relational domains and therefore naturally defines a dynamic multilayer network. The results indicate that negative verbal interactions (Verbal-) play a prominent role in the subsequent structural reconfiguration of the material-interaction layers, while mean strength exhibits the strongest temporal persistence and reciprocity the broadest cross-statistic influence. These findings illustrate the usefulness of MAR models for providing a parsimonious and interpretable characterization of temporal and cross-layer dependence in dynamic multilayer networks.
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Statistics Applications · Cross-listed from cs.LG
Translation of Black-Box Clinical Prediction Models into Standalone Transparent Nomograms: Temporal External Validation in Heart Transplantation
Henry Pigot, Paulo J. G. Lisboa, Sandra Ortega-Martorell et al. (+3 more)
We convert black-box clinical prediction models for tabular data into standalone nomograms that can be audited term by term. PRiSM (Partial Responses in Structured Models) takes the shape of each effect and interaction from the source model, not merely which variables mattered, and lets the outcome select and weight them. We tested this in 50,356 heart transplant recipients, with validation in a later era than training. Nomograms from all 5 source models - a public clinical risk score, logistic regression, neural networks, random forests and extreme gradient boosting - met a prespecified noninferiority criterion for discrimination before any further simplification, and generally preserved calibration and clinical net benefit. Those from the 3 machine-learning models showed no detectable difference in discrimination from de novo generalized additive and explainable boosting models, exceeded neural additive models, and carried fewer terms than the explainable boosting model. PRiSM is released as an open-source Python package.
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All authors Henry Pigot, Paulo J. G. Lisboa, Sandra Ortega-Martorell, Ivan Olier, Joseph Mahon, Johan Nilsson
Statistics Applications · Cross-listed from physics.chem-ph
Simulation-Supervised Foundation Models for Retention Time Prediction in High-Performance Liquid Chromatography beyond Experimental Data Coverage
Stephen Wu, Yufeng Han, Yasuhiro Mito et al. (+5 more)
Accurate prediction of high-performance
liquid chromatography (HPLC) retention times (RTs) across diverse molecules and chromatographic methods remains challenging because experimental training data cover only a limited region of chemical and method spaces. Here, we develop FUSE-RT (Foundation model Unifying Simulation and Experimental supervision for Retention Time), a multitask foundation model that integrates RT data from 179 chromatographic methods and adapts to unseen molecules and methods using limited target-domain data. To extend transferability beyond experimental coverage, we introduce simulation-to-real (Sim2Real) transfer learning, in which molecular representations learned from large-scale computational data are transferred to experimental RT prediction. Specifically, we use PolyOmics, comprising 39 properties for approximately 21,400 molecules generated by molecular dynamics and density-functional theory calculations, as auxiliary supervision. We evaluate generalization under molecular, method, and joint molecular–method distribution shifts. Simulation-derived supervision substantially improves transfer beyond the experimental molecular domain, particularly under pronounced coverage gaps and few-shot adaptation. Moreover, RT-prediction error decreases systematically with increasing simulation-data size, following a significant power-law relationship. These results establish Sim2Real transfer as a scalable strategy for extending RT prediction beyond the finite coverage of experimental chromatographic data.
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All authors Stephen Wu, Yufeng Han, Yasuhiro Mito, Yoshiyuki Watabe, Yoshihiro Hayashi, Hikaru Takaya, Takuya Kubo, Ryo Yoshida
Statistics Applications · Cross-listed from cs.LG
Statistical versus machine learning-based spatial interpolation of post-processed ensemble weather forecasts
Mária Lakatos
Statistical post-processing improves ensemble weather forecasts, but generating calibrated predictions at locations without observations remains challenging. This study compares statistical and machine-learning-based methods for post-processing ECMWF 2-m temperature and 10-m wind speed forecasts at observed and unobserved stations in Germany. We consider EMOS-based approaches, distributional regression networks,
Transformers, and graph neural networks under both limited and extended predictor settings. For temperature, we also investigate linear forecast combinations and propose an altitude-aware linear pool (ALP). The results show that post-processing improves upon the raw ensemble in most settings, but no single method performs best across all variables, station groups, and evaluation metrics. The proposed ALP provides a small but significant improvement over the standard linear pool at unobserved locations.
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Statistics Applications · Cross-listed from stat.ML
Distributed Lag Neural Additive Models
Calle Helmersson, Shivang Pandey, Leonardo Olivetti et al. (+1 more)
We introduce Distributed Lag Neural Additive Models (DLNAMs), neural-additive analogues of Distributed Lag Non-linear Models (DLNMs) for learning nonlinear effects distributed over lags. DLNAMs replace a prespecified spline cross-basis with neural components that learn exposure–lag response surfaces, avoiding choices of basis family, dimension, and
knot placement while preserving additive interpretability and familiar distributed-lag summaries. Exp-centered input layers, smooth activations, and learned subnetwork mixtures produce smooth, locally adaptive representations; pointwise uncertainty combines a conditional last-layer Laplace approximation with between-member ensemble variation. In simulations, DLNAMs generally outperformed DLNM comparators, including penalized and treed variants, in recovering known response functions, with lower bias, stronger boundary recovery, and better-calibrated cumulative intervals; gains were largest for more demanding functions. The architecture performed consistently across sample sizes, outcome families, lag horizons, and jointly fitted multi-exposure settings, retaining recovery performance as exposures were added; fit-specific changes were largely confined to optimization, and applications recovered established empirical patterns.
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All authors Calle Helmersson, Shivang Pandey, Leonardo Olivetti, Elena Raffetti
Statistics Applications
Bayesian Emulation of Multi-fidelity Earth System Modelling Using Hierarchical Gaussian Processes
Xiaoyu Xiong, Louise Kimpton, Huiyi Yang et al. (+3 more)
Multi-fidelity Earth system models provide simulations at different levels of complexity and computational cost, but exhaustive exploration of the parameter space at the highest fidelity is often prohibitively expensive. Multi-fidelity emulators can reduce this burden by combining abundant lower-fidelity simulations with limited high-fidelity evaluations. We compare four Gaussian-process-based multi-fidelity approaches: the Kennedy–O'Hagan autoregressive model (K&O), hierarchical kriging (HK),
Bayesian hierarchical emulation for multi-level models (BayHEm), and multi-fidelity deep Gaussian processes (MF-DGP). We evaluate the methods using two contrasting applications: a three-fidelity tsunami simulator and a two-fidelity implementation of the Joint UK Land Environment Simulator (JULES). Performance is assessed using leave-one-out predictive accuracy, uncertainty representation, design requirements, and computational characteristics. In the tsunami application, BayHEm gives the lowest normalised root mean square error (NRMSE = 0.031) and highest SCORE (3.025), while MF-DGP performs worse than the single-fidelity baseline when only 10 high-fidelity simulations are available. In the JULES application, MF-DGP gives the lowest NRMSE (0.079) and highest SCORE (3.032), with all 30 held-out high-fidelity observations lying within their nominal 95% predictive intervals. These contrasting results show that no single multi-fidelity emulator is uniformly superior. Instead, method choice should reflect the complexity of the inter-fidelity relationship, the amount of high-fidelity information available, and the importance placed on predictive accuracy and uncertainty quantification.
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All authors Xiaoyu Xiong, Louise Kimpton, Huiyi Yang, Mian Xu, James Salter, Peter Challenor
Statistics Applications
Structure-Adaptive E-Value Filter for Detecting Regional Signals in Brain Imaging
Jingcheng He, Hangjin Jiang, Wenguang Sun et al. (+1 more)
Structural MRI provides a noninvasive view of the neuroanatomical differences associated with cognitive impairment and dementia. Using data from the Alzheimer's Disease Neuroimaging Initiative, we investigate which anatomical regions exhibit widespread gray-matter differences and how these regional patterns vary across the clinical spectrum. Addressing this goal requires translating spatially dependent voxel-level evidence into regional conclusions while controlling multiplicity across anatomical regions. We propose the Structure-adaptive E-value FilTer (SEFT), which uses flexible working models to construct spatially adaptive voxel-level scores and aggregates them into regional partial-conjunction e-values. When combined with the e-value Benjamini–Hochberg (e-BH) procedure, these e-values provide finite-sample control of the set-wise false discovery rate under arbitrary interregional dependence. The ADNI analysis reveals a coherent neuroanatomical pattern: the exploratory analysis shows that differences between normal cognition and mild cognitive impairment are concentrated in medial-temporal regions, whereas the differences between mild cognitive impairment and dementia extend more broadly into temporal–limbic and posterior association regions. Both patterns largely overlap the normal-cognition–dementia
benchmark, identifying a shared anatomical core across the clinical comparisons.
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All authors Jingcheng He, Hangjin Jiang, Wenguang Sun, for the Alzheimer's Disease Neuroimaging Initiative
Statistics Applications · Cross-listed from stat.ME
Bayesian nonparametric inference for modal missing species and features
Alessandro Colombi, Mario Beraha, Daniele Durante et al. (+1 more)
Species and feature sampling problems arise naturally whenever each observed unit is associated with one or more labels from a countable alphabet, and inference focuses on the unobserved portion of the distribution over such an alphabet. Within this framework, recent contributions have shifted
attention from inference on the total probability mass over unseen labels to distribution-free confidence intervals for the largest unobserved label probability (i.e., the modal missing probability), thereby providing more refined information on whether the missing mass is concentrated on a few high-prevalence unseen labels or distributed across many negligible ones. Besides lacking a unified framework for species and features, these approaches employ a worst-case perspective that causes substantial information loss and produces overly-conservative intervals. We address these limitations through a unified model-based framework for inference on modal missing probabilities in both species and feature settings, which leverages a flexible
Bayesian nonparametric formulation to localize uncertainty around models compatible with the observed data. This leads to sharper closed-form credible intervals that effectively exploit prior information and observed data, while preserving the theoretical frequentist properties and robustness of distribution-free intervals. Simulation studies confirm these improvements, while an organized crime application illustrates how our contribution has the potential to reshape law-enforcement decision-making in investigations.
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All authors Alessandro Colombi, Mario Beraha, Daniele Durante, Stefano Favaro
Statistics Applications · Cross-listed from econ.EM
Choosing the Dictionary and Penalty for IV-LASSO
Yukun Ma, Manu Navjeevan and Bogdan Salahub
Estimating the first stage of an instrumental variables (IV) model with the least absolute shrinkage and selection operator (LASSO) requires choosing a dictionary of technical instruments and a penalty level. First-order asymptotic theory offers no guidance on these choices, as any consistent implementation yields a structural parameter
estimator with the same limiting distribution. In finite samples, however, these choices can have a substantial impact on the resulting structural parameter estimate. Working in a model with a single endogenous regressor and homoskedastic Gaussian errors, we use first- and second-order Stein identities to derive the approximate mean squared error (AMSE) of the instrumental-variables LASSO (IV-LASSO)
estimator, which can be consistently estimated and used to rank a prespecified list of dictionary-penalty candidates. The AMSE reveals a bias-variance trade-off: more complex first-stage fits better approximate the conditional mean of the endogenous variable but are also more correlated with the structural errors, with complexity measured by the degrees of freedom of the LASSO fit. The weight on this bias rises with the endogeneity of the regressor, a quantity that neither plug-in nor cross-validation penalty rules take into account. Despite the AMSE being derived in a Gaussian model, penalty selection by minimizing the feasible AMSE criterion delivers up to a one-third lower mean squared error compared to cross-validation and plug-in penalty rules in Gaussian and non-Gaussian simulation designs calibrated to the data of Gilchrist and Sands (2016).
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