Statistical Methodology
Adaptable Regularized CCA Tests for Independence of High-Dimensional Random Vectors
Haoran Li
We propose an adaptable testing procedure for independence between two high-dimensional random vectors. The method incorporates ridge regularization and principal component-based dimension reduction into the canonical correlation analysis (CCA) framework, thereby stabilizing classical test statistics in high-dimensional settings. Depending on the reduced dimension, we develop both a regularized likelihood ratio test and a regularized largest-root test to accommodate different testing scenarios. We establish the asymptotic behavior of the proposed procedures under both the null hypothesis and representative alternatives, and further develop a data-driven method for selecting the regularization parameter. Extensive simulation studies demonstrate favorable finite-sample performance across a broad range of settings.
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Statistics Applications · Cross-listed from cs.LG
Pitfalls of Administrative Censoring in Survival Models with Time-Indexed Inputs
Yanqi Xu, Hui Dai, Carlos Fernandez-Granda et al. (+2 more)
Survival models can model time-to-event outcomes using partially observed data. They are widely used in clinical prediction, including cancer risk, disease progression, treatment response, and mortality. Recent models often rely on rich inputs collected at a specific clinical encounter, such as medical images, laboratory tests, electronic health record snapshots, or sensor measurements. In large retrospective
datasets, these inputs are usually collected over many calendar years. As a result, they may contain clues about when they were acquired through changes in devices, protocols, documentation, patient mix, or clinical practice. This creates a potential failure mode when outcomes are observed only up to a fixed study end date. More recent records necessarily have less potential follow-up than older records. A model that can infer the record date from the input may therefore learn to predict how much follow-up was available rather than the patient's true risk of experiencing the event. We call this failure mode administrative-cutoff leakage. In this paper, we characterize when this leakage can occur, distinguish it from classical informative censoring and genuine temporal changes in risk, and propose practical ways to detect it. In simulations, we show that administrative-cutoff leakage can inflate fixed-horizon AUC and can also affect Harrell's C-index under realistic follow-up patterns. We then demonstrate the same behavior in a real mammography cohort. These results motivate a simple design principle for survival prediction: for an n-year prediction task, the
dataset should provide at least n years of potential follow-up after the latest input date. Otherwise, the models may be subject to bias induced by administrative-cutoff leakage.
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All authors Yanqi Xu, Hui Dai, Carlos Fernandez-Granda, Krzysztof J. Geras, Yiqiu Shen
Machine Learning (Statistics)
Integrating Background Knowledge for Scalable Causal Discovery
Mátyás Schubert, Theofanis Aslanidis, Tom Claassen et al. (+1 more)
Expert background knowledge is often available in practical applications of causal discovery. Such constraints on the true causal graph can help causal discovery in terms of identifiability of causal effects and accuracy of the learned structure, but also in reducing the space of candidate causal graphs. As causal discovery can become computationally expensive for large number of variables, it is crucial to utilize background knowledge effectively during the causal discovery process. However, most current methods only use background knowledge in a postprocessing step after causal discovery to refine the learned graph. In this work, we develop a framework for utilizing background knowledge during the causal discovery process, focusing especially on scalable causal discovery methods that recover only a subset of the whole graph. We implement our framework for multiple
algorithms and empirically show that utilizing background knowledge can both reduce computational requirements and increase the quality of the learned structures.
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All authors Mátyás Schubert, Theofanis Aslanidis, Tom Claassen, Sara Magliacane
Statistical Computation
Scalable Bayesian Quantile Regression via EM and INLA: The EM-INLA Algorithm
Tomas Rodriguez Taborda and Johnatan Cardona-Jiménez
We propose EM-INLA, a scalable
algorithm for empirical-Bayes hierarchical
quantile regression that combines the Expectation-Maximization (EM)
algorithm with Integrated Nested Laplace Approximations (INLA). The method exploits the normal-exponential mixture representation of the Asymmetric Laplace Distribution (ALD) to reformulate each M-step as a weighted Gaussian regression handled by INLA, with the ALD scale and random-effect variances updated in closed form at each iteration. The scale and variance hyperparameters are estimated by marginal maximum likelihood via the EM
algorithm, and posterior marginals for the regression and random-effect parameters are obtained from a final INLA call conditional on the converged hyperparameter estimates. The result is an
algorithm that avoids all MCMC sampling while scaling to large
datasets and complex hierarchical structures that are intractable for standard fully
Bayesian approaches. In a simulation study across four error scenarios, EM-INLA recovers the true parameters with accuracy comparable to
Hamiltonian Monte Carlo (HMC) while achieving speedups ranging from 15x to over 50x depending on the scenario. The method is applied to the 2023 Prueba Saber 11 standardized test in Colombia to model the conditional
quantiles of student scores as a function of socioeconomic
covariates under a hierarchical structure of students nested within schools and municipalities, with over 400,000 observations.
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Machine Learning (Statistics)
TSCoNet: A Two-Stage Copula CNN-LSTM for Uncertainty-Aware Spatio-Temporal Forecasting
Jongwook Kim and Jong-Min Kim
Reliable
forecasting of several interrelated environmental variables - such as regional precipitation and temperature, or other correlated geophysical fields - across many locations calls for accurate predictions accompanied by trustworthy statements of their uncertainty. Modern deep-learning models forecast such variables accurately but usually report no uncertainty, and forcing them to output uncertainty through maximum likelihood tends to degrade their accuracy, especially when the variables are strongly correlated. Motivated by this tension, we develop TSCoNet, a two-stage convolutional-recurrent model coupled with a Gaussian copula that jointly forecasts multiple variables over space and time while quantifying predictive uncertainty. The method first learns accurate mean forecasts and then, holding the mean fixed, refines a shared representation to estimate the predictive variance, yielding calibrated prediction intervals after a standard recalibration, so that uncertainty is added without sacrificing point accuracy. We study the approach on simulated non-stationary spatial fields on the sphere and on a real
dataset of monthly precipitation and temperature for fifty cities over 2000-2020. The model matches the accuracy of a strong deterministic forecaster while supplying calibrated prediction intervals that the deterministic model cannot, giving a single tool that provides both accurate point forecasts and reliable uncertainty for multivariate spatio-temporal data.
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Statistical Computation
Towards Automated Confidence Bound Provers and Searchers
My Phan and Erik Learned-Miller
In this work we lay the groundwork for automating the process of finding and proving the validity of lower confidence bounds of the mean. Our key finding is based on the observation that finding an optimal confidence bound under certain conditions can be formulated as an optimization problem. We use this observation to show that any valid confidence bound (such as Hoeffding's) must be a relaxation of a certain optimization problem. To automatically find and prove confidence bounds, we need to automate the process of defining and finding such a relaxation. We define a family of relaxations parameterized by a function called the order function. This family of relaxations can approximate any other target relaxation such as Hoeffding's by using the target as the order function. When the order function is linear (such as the sample mean in the case of Hoeffding's), our relaxation is a linear-size mixed-integer linear program.
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Statistics Applications
From Stochastic to Stable: Rank Stability and Structural Sufficiency in AI Visibility Measurement
Ronald Sielinski
AI visibility measurement is comparative: practitioners want to know which domains generative search engines cite most often and whether observed differences are large enough to support decisions. Yet the industry lacks a principled way to determine whether enough data has been collected. Collection budgets vary widely across studies and platforms, and conclusions are often drawn from rankings whose stability and precision are unknown. We introduce a sequential convergence framework based on two complementary criteria: rank stability evaluates whether the rank-correlation trajectory has reached a structural plateau, while structural sufficiency evaluates whether the spread of citation shares among established domains – those whose confidence intervals exclude zero – exceeds the uncertainty of those estimates. Together, these criteria distinguish rankings that have merely stabilized from those sufficiently resolved to support inference. Both are derived from regularities in the observed citation distribution, including its rank structure, uncertainty profile, and the boundary between observed and established domains. The framework retains a small number of structural constants but requires no externally specified query count, correlation target, or confidence-interval width target; stopping is driven by observed measurement uncertainty and remains robust across a range of sufficiency thresholds. Applied across 30 platform-topic combinations spanning Gemini, SearchGPT, and Perplexity, the framework adapts to platform- and topic-specific citation distributions. Results show that no fixed collection budget can be justified across contexts and that convergence can instead be evaluated from the structure of the observed distribution. The framework provides a practical basis for determining when AI visibility measurements are ready to support comparative analysis.
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Statistical Methodology
Graph statistics: An emerging discipline in non-Euclidean data analysis
Rongling Wu and Shing-Tung Yau
The explosive growth of complex data has catalyzed the emergence of graph statistics as a fundamentally new discipline in data science. Unlike traditional statistics, which operates primarily within the comfortable confines of Euclidean spaces, graph statistics confronts the reality that modern data naturally organize themselves as dynamic networks composed of complex interconnections. In this article, we present an overview of graph statistics as an emerging discipline, tracing its theoretical foundations, methodological innovations, and transformative applications. We examine how the integration of evolutionary game theory, ecological niche theory, topological data analysis, and graph theory through quasi-dynamic nonlinear modeling has created a new norm of statistical thinking capable of analyzing non-Euclidean data. We show how graph statistics is poised to revolutionize fields ranging from quantitative genetics and systems biology to materials science and artificial intelligence, offering a principled framework for transforming big data into practical knowledge.
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Statistical Methodology
Bayesian Robustness Values for Modern Causal Panel Estimators via Riesz Representations
Makoto Nakakita and Takahiro Hoshino
We develop a sensitivity-analysis workflow for causal panel
estimators, covering synthetic difference-in-differences,
matrix completion, fixed-effect imputation, and group-time average treatment effects. The workflow combines Riesz-representation omitted-variable-bias bounds with partial-$R^2$ robustness values and separates two reporting routes. Route A gives a direct sensitivity profile for additive or projected confounding summarized by outcome-side and Riesz-side partial $R^2$ values. Route B treats observed-
covariate benchmarks as auxiliary data only when
benchmark-count, alpha-side
alignment, model-check, dependence, and dominance diagnostics are credible; otherwise its main role is demotion. We derive
estimator-specific Riesz diagnostics and clarify which are fixed-weight, target-level, or first-stage-conditional rather than full derivatives of regularized training maps. Monte Carlo stress tests distinguish calibrated
benchmark settings from dominance failure, coarse alpha-side
benchmarks,
benchmark dependence, noisy
covariates, and concentrated SDID weights. In the California tobacco-control panel, the SDID estimate is $-15.60$ packs per capita; corrected finite-donor placebo inference gives standard error 9.49 and add-one $p=0.051$. A refit-weight finite-difference audit changes the Route A nullification robustness value from 0.054 to 0.045, leaving the low-single-digit conclusion unchanged. A county-level minimum-wage application applies the same profile to a multi-cohort staggered panel.
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Statistics Theory
Nonparametric estimation of the diffusion coefficient of an ergodic diffusion process on non-compact supports under Osgood's conditions
Eddy-Michel Ella-Mintsa
In this paper, we study the nonparametric estimation of the squared
diffusion coefficient of an ergodic
diffusion process on non-compact supports, when the two coefficients of the
stochastic differential equation belong to a space larger than the space of Hölder continuous functions. The
estimators are constructed by projection onto finite-dimensional spaces, thereby avoiding truncation of the dimension. We establish risk bounds of non-adaptive
estimators and explicit rates of convergence for bounded and unbounded
diffusion coefficients. A model selection procedure is performed, followed by the derivation of risk bounds using Talagrand's inequality. The theoretical results are completed with a numerical study over simulated data.
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Statistical Methodology
Scalable Bayesian structure learning of directed acyclic graphs via Laplace approximation, with an application to breast cancer gene expression networks
Samaneh Nazari, Mohammad Arashi and Abdolnasser Sadeghkhani
Structure learning of directed acyclic graphs (DAGs) from observational data is a foundational task in causal discovery and is widely used to infer regulatory networks from medical and genomic measurements. The
Bayesian formulation quantifies model uncertainty and admits prior biological knowledge, but its practical use has been hampered by the super-exponential growth of the DAG space and by the intractability of the node-marginal likelihood under flexible, non-conjugate priors. Existing closed-form solutions are largely confined to the conjugate Normal–Inverse-Gamma prior. We develop a Laplace-approximated
Bayesian scoring function for the non-conjugate Normal–Gamma prior on the modified Cholesky parameterisation of the precision
matrix, embed it in a Metropolis–Hastings sampler over DAGs, and couple the latent Gaussian network to a binary clinical outcome through a probit link. We show that the node-marginal integral is of generalised inverse-Gaussian form, so that its exact value is a modified Bessel function of the second kind and the proposed scoring function is its leading large-argument asymptotic; the posterior of each conditional variance is likewise generalised inverse-Gaussian and is sampled exactly. In simulation, the proposed prior improves on the conjugate baseline and on the PC, greedy-equivalence-search, NOTEARS, and DAGMA
benchmarks at sample sizes typical of clinical cohorts. On two real
datasets, the Sachs
protein-signalling network, scored against its validated consensus graph, and the Wisconsin Diagnostic Breast Cancer data, the method recovers known structure and, through the DAG-probit extension, predicts malignancy from
nuclear morphometry with a cross-validated ROC-AUC of $0.94$ using a sparse, interpretable set of direct predictors.
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Machine Learning (Statistics) · Cross-listed from cs.LG
The Differential Neural Tangent Kernel and Its Positivity
Bangti Jin and Longjun Wu
The Neural Tangent Kernel (NTK) is one powerful tool for analyzing the training dynamics of neural networks in the over-parameterized regime. Recently, the theoretical framework has been extended to physics-informed neural networks (PINNs) for solving linear PDEs, one highly popular class of neural PDE solvers. In the analysis, the positivity of the associated NTK plays a fundamental role. However, establishing the positivity of the NTK for PINNs is highly challenging, due to the presence of multiple differential operators. In this work, we propose a new theoretical framework, called Differential Neural Tangent Kernel (DNTK), for analyzing PINNs through the lens of the NTK, and establish the positivity of the infinite width DNTK for both shallow and deep neural networks for a wide class of activation functions, including RePU and smooth but non-
polynomial activations, for all linear differential operators. These theoretical results lay the foundation for the analysis of gradient type
algorithms for training PINNs.
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Machine Learning (Statistics) · Cross-listed from cs.LG
Energy-guided Recursive Model
Yifei Zhao and Ying Tang
Recursive models show promise on
reasoning and
language tasks, yet their test-time scaling lacks a principled criterion for selecting trajectories or determining recurrent depth. We introduce Energy-guided Recursive Model (ERM), which uses Hopfield-type
memories of valid local and global structures to assign intrinsic energies to candidate trajectories. These energies guide candidate selection and suggest an effective range of recurrent depths, implying that deeper recurrence does not necessarily improve
reasoning accuracy. They also enable sampling methods such as parallel tempering to improve exploration. For
reasoning tasks, ERM achieves optimal solutions on Sudoku ($98.97\%$), Pencil Puzzle Bench (PPBench, $88.04\%$) and Maze ($99.30\%$), reaching the best accuracy in recursive modeling. On
language modeling, ERM reduces RedPajama-V2 perplexity by $1.74\%$ with marginal inference overhead. The results support energy guidance as a practical framework for improving test-time scaling in recursive models.
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Statistics Theory · Cross-listed from math.PR
Dynamical mean-field limit and replica-symmetric free energy for the orthogonally-invariant SK model
Zhou Fan, Theodor Misiakiewicz, Leda Wang et al. (+1 more)
We study a class of
diffusion processes on $\mathbb{R}^n$ interacting through a symmetric
matrix $X\in\mathbb{R}^{n\times n}$. When eigenvectors of $X$ are Haar-uniform on the orthogonal group, we derive a dynamical mean-field limit for the empirical law of sample paths, extending the classical Sompolinsky–Zippelius characterization for $X\sim\mathrm{GOE}$. The limit takes the form of a generalized Langevin equation with correlated Gaussian noise and
memory, whose correlation and response kernels relate to those of the original dynamics through convolution equations involving the free cumulants of the
eigenvalue distribution of $X$. For the overdamped Langevin
diffusion associated with $\mu(\boldsymbol{\theta})\propto \exp\!\big(\frac12\boldsymbol{\theta}^{\top}X\boldsymbol{\theta}\big)\prod_{i=1}^n\nu(\mathrm{d}\theta_i)$, we analyze the mean-field limit under a rapid-mixing assumption. The correlation and response kernels admit time-translation-invariant approximants satisfying a fluctuation-dissipation relation. The generalized Langevin equation admits a Markovian approximation coupled to an auxiliary multivariate OU process and converges to a replica-symmetric prediction for the empirical coordinate law under $\mu$. This auxiliary correlation structure is characterized through the infinitesimal generator of a Markov
semigroup for the lifted path-history process. Consequently, the free energy converges to a replica-symmetric limit under an explicit high-temperature condition, which for an Ising model is $\|X\|_{\mathrm{op}}<1/2$. By recent dynamical universality results, the same free-energy characterization holds for deterministic models without random disorder when $X$ satisfies a set of deterministic delocalization conditions.
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All authors Zhou Fan, Theodor Misiakiewicz, Leda Wang, Garrett G. Wen
Machine Learning (Statistics) · Cross-listed from cs.LG
Conservation Laws for Diffusion Models
Ziv Aharoni and Henry D. Pfister
While autoregressive models optimize the exact data likelihood via the chain rule,
diffusion models are typically trained with denoising objectives. We develop conservation laws based on generalized extrinsic information transfer (GEXIT) functions for a broad class of memoryless noise processes, showing that the data–model cross-
entropy (CE) can be characterized exactly as an integral of local information-theoretic derivatives along the noise path. This yields a unified characterization of the likelihood for discrete and continuous
diffusion, with the Gaussian case reducing to the well-known mutual information–minimum mean-square error (I-MMSE) relationship. An immediate implication is a locality property: one can compute the information-theoretic derivatives using only the marginal posteriors along the noise path. As a result, training reduces to learning the marginal posteriors by minimizing the negative log-likelihood. While the conservation law implies that the
entropy does not depend on the noise path, finite-capacity denoisers approximate the posteriors with varying accuracy across noise types, leading to differences in performance. We validate these predictions on synthetic Markov sources and standard
benchmarks, including text8 and CIFAR-10.
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