Computational Physics · Cross-listed from cs.LG
An Energy-Based Conservative-Dissipative Latent Neural Evolution Operator for Magnetization Dynamics
Sebastian Schaffer and Lukas Exl
We develop an energy-based reduced-order model for micromagnetic magnetization dynamics that couples a convolutional autoencoder to a structured latent neural ordinary differential equation. Motivated by the precessional-dissipative structure of the Landau-Lifshitz-Gilbert equation, the latent vector field is generated from the gradient of a learned scalar potential through an antisymmetric operator and a symmetric positive-semidefinite dissipative operator. This potential is learned in nonunique latent coordinates and is not identified with the Gibbs free energy, but decreases monotonically along autonomous continuous-time solutions, while the antisymmetric component permits motion along its level sets. The encoder, decoder, latent energy, and operators are trained jointly on short trajectory windows using latent and decoded-rollout losses alone, without time-derivative supervision, physical-energy labels, or dissipation penalties. At inference, an initial state is encoded once, evolved in latent space, and decoded only at the requested output times, enabling substantially cheaper trajectory prediction than the micromagnetic solver used to generate the training data. We compare quadratic, deep, and additive deep-quadratic latent energies on two
datasets parameterized by field amplitude and generated for the two applied-field directions of the NIST $\mu$MAG Standard Problem 4. Dissipative-only and antisymmetric-dissipative models achieve comparable accuracy on short training-style windows but differ substantially on uninterrupted rollouts, for which the antisymmetric-dissipative models provide markedly more accurate trajectory predictions. The deep-quadratic energy gives the best overall accuracy for both field directions and exhibits slower error growth when rollouts are extended to twice the training horizon.
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Computational Physics · Cross-listed from physics.chem-ph
Learning Memory-Dependent Neural Network Correlation Potentials for Accurate Electron Dynamics
Harish S. Bhat and Christine M. Isborn
Time-dependent density functional theory, though exact in theory, is in practice applied in an adiabatic approximation using exchange-correlation functionals with only local temporal dependence. Simultaneously, the exact correlation potential formally depends on, among other quantities, the time-history of electron densities. Here we develop a framework to learn neural network models of correlation functionals that feature explicit
memory-dependence. Our framework includes two different approaches, both linked through their use of adjoint-based optimization. One approach decouples the learning of the functional from inversion to find ground truth values of the correlation potential. The other approach learns the functional directly without requiring inversion. We apply these methods to modeling the electron dynamics of two-electron systems in two spatial dimensions. In both cases, our methods yield correlation functionals with low test set propagation error, outperforming standard local density and generalized gradient approximation functionals by one to two orders of magnitude. Overall, our framework points at one strategy to move beyond the adiabatic approximation and develop
memory-dependent correlation functionals that yield accurate propagation for excited state and/or non-
equilibrium dynamics.
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Computational Physics
Reduced Precision Diffusion Synthetic Acceleration for S$_N$ Neutron Transport in LLNL's ARDRA using Hypre
Joanna Piper Morgan and Mario Ivan Ortega
Fast solution times in production discrete ordinates transport codes often require the use of
diffusion synthetic acceleration (DSA). A good implementation of DSA will substantially reduce the number of iterations to converge the transport solution at the cost of solving a
diffusion-like linear system at each iteration. Often fewer transport iterations will lead to smaller times to solution. Recent work has shown the promise of reduced precision preconditioning. Time and
memory cost can be decreased as long as the reduced precision does not substantially degrade the convergence behavior of the higher precision linear system being solved. In this paper, we discuss the algorithmic implications of accelerating transport iterations in double precision (64 bit) while using a reduced precision (32 bit) DSA solve. We initially implement a stand alone code to investigate any theoretical limitations of reduced precision DSA in slabs. Then we implement reduced precision DSA in ARDRA, Lawrence Livermore National Laboratory's (LLNL) discrete ordinance neutral particle transport code, coupled with hypre, LLNL's scalable linear solver and multigrid methods library capable of mixed precision linear solves Then we solve various
neutron transport problems of interest. We find that in most circumstances, DSA acceleration in reduced precision has little to no impact on the acceleration properties of DSA when used with source iteration in most circumstances. However, as tighter tolerances are required, reduced precision DSA may fail to successfully accelerate the transport solve and increase time to solution.
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Computational Physics · Cross-listed from physics.chem-ph
Learning multistate kinetics with a variational multistate committor network
Chenyu Tang, Cheng Giuseppe Chen, Benoît Roux et al. (+1 more)
The long-time dynamics of complex molecular systems often involves rare transitions across networks of metastable states. Building on transition-path theory, which provides a rigorous framework for describing rare transitions between two metastable states, we introduce the variational multistate committor network (VMCN), a neural framework that learns the probabilities of reaching each metastable state directly from molecular simulation data. From this representation, VMCN identifies state-specific commitment, candidate transition regions and committor-consistent pathways between state pairs, and an effective kinetic network characterized by transition rates. The model is trained using finite time-lag trajectory data together with boundary conditions defined on conservative state cores. Applications to a triple-well potential, trialanine isomerization, and the $c$–ring rotation in the V$_{\rm o}$ domain of a vacuolar ATPase show that VMCN recovers metastable organization, provides committor-consistent descriptions of transition mechanisms, and estimates state-to-state kinetics. VMCN further provides diagnostics for incomplete state decompositions and enables adaptive exploration of candidate metastable states and their connecting regions. By integrating VMCN with generative committor-guided path sampling (Gen-COMPAS) for chignolin, we start from two end point structures, identify a misfolded state and a candidate folding intermediate, and we direct subsequent sampling toward the resulting multistate transition network.
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All authors Chenyu Tang, Cheng Giuseppe Chen, Benoît Roux, Christophe Chipot
Computational Physics
Spectral and Eigenvector Crossovers in Random Mixed Graphs
Himanshu Shekhar, Hrishidev Unni, Santosh Kumar et al. (+1 more)
We study the spectral and eigenvector properties of random mixed graphs, combining undirected and directed interactions, using random
matrix theory (RMT). The network is represented by a Hermitian adjacency
matrix, with undirected links as real entries and directed links as purely imaginary conjugate pairs, ensuring a real spectrum. Network density is controlled by the connection probability, while directionality sets the fraction of directed edges. We focus on the GOE-to-GUE crossover: at fixed connectivity, increasing directionality breaks time-reversal
symmetry and drives spectral statistics from GOE to GUE. We show that this transition requires sufficient connectivity. In sparse networks, weak level repulsion produces Poisson statistics regardless of directionality. At fixed directionality, increasing connectivity drives a Poisson-to-GUE crossover; only above a sparsity threshold does the directionality-induced GOE-to-GUE transition emerge. In the dense regime, where the spectral density follows the Wigner semicircle law, the crossover is characterized using spacing distributions, spacing ratios, and spectral rigidity. In sparse networks, where unfolding is unreliable, spacing-ratio statistics provide an unfolding-free characterization. Eigenvector structure is examined through multifractal dimensions and component distributions, while Kullback–Leibler divergence confirms the robustness of the transitions. Applied to S&P 500 mixed graphs, the framework reveals a GOE-to-GUE crossover across four major
market crashes. Denser crisis periods show sharper crossovers than sparser recovery periods. The results provide a unified picture of how connectivity and
symmetry breaking govern spectral and eigenvector universality, while providing a transparent probe of changing financial-
market organization.
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All authors Himanshu Shekhar, Hrishidev Unni, Santosh Kumar, Anirban Chakraborti
Computational Physics · Cross-listed from quant-ph
Discrete time crystals in disordered anisotropic Heisenberg chains
Francesco Formicola, Grazia Di Bello, Antonio De Candia et al. (+2 more)
A discrete time
crystal is an out-of-
equilibrium phase of matter characterized by the spontaneous breaking of discrete time-translation
symmetry. Using extensive numerical simulations based on
matrix-product-state methods, we provide evidence for discrete time-crystalline behavior in strongly disordered
spin chains with Heisenberg interactions, including the isotropic point, subject to periodic driving. Starting from a many-body localized regime, we observe that rotations induced by delta kicks produce a pronounced subharmonic response at half the drive frequency in
spin observables. We investigate the stability of this response against rotation-angle errors through
entanglement entropy,
quantum Fisher information, short-range
spin correlations, and restricted-control ergotropy. Increasing the rotation error reveals an intermediate dynamical regime separating the time-crystalline and Floquet-localized responses. In this regime, most observables exhibit signatures of weakly correlated dynamics reminiscent of Anderson localization.
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All authors Francesco Formicola, Grazia Di Bello, Antonio De Candia, Giulio De Filippis, Carmine Antonio Perroni
Computational Physics
Stochastic Operator Inference for reduced-order modeling of capillary wave turbulence using experimental measurements
Hyeonghun Kim, Lei Zhang, James Friend et al. (+1 more)
Modeling complex physical phenomena directly from experimental data poses fundamental challenges: measurement devices introduce noise and biases into the data, the governing equations are often unknown or intractable, and the dynamics observed experimentally may exhibit
stochastic behavior. In this paper, we consider capillary wave
turbulence—an example of nonlinear wave interactions at a microfluidic interface—measured by ultra-high-speed digital holographic microscopy. With the goal to learn an efficient model directly from these data, we adapt a
stochastic extension of Operator Inference to learn low-dimensional
stochastic differential equation representations of the microscale wave dynamics from experimental measurements. Each experiment is repeated 16 times, and 10 different conditions are created by changing the nondimensional acoustic capillary number through an excitation device. In addition, we propose a new strategy to select the reduced-order model dimension, based on both mean and covariance errors. We further add Tikhonov regularization to the
stochastic Operator Inference framework and show that, beyond its conventional role as a numerical stabilization technique in deterministic settings, it has a physically meaningful interpretation as controlling the spectral content of the learned
stochastic dynamics. We demonstrate that the resulting
stochastic reduced-order models faithfully capture salient physical features of capillary wave
turbulence across a range of experimental conditions.
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All authors Hyeonghun Kim, Lei Zhang, James Friend, Boris Kramer
Computational Physics · Cross-listed from cond-mat.mtrl-sci
Performance of Nanoring-based Transparent Conductors: a Computational Investigation
Gijs Vanoppen, Jef Hooyberghs, Wim Deferme et al. (+1 more)
Metallic nanoring networks can serve as promising flexible transparent electrodes. These materials are crucial components in a wide range of applications, including solar
cells, touchscreens and displays. In this work, a computational investigation considers in detail (i) the electrical conductance and optical performance of nanoring networks and (ii) the breakdown of these networks due to electrical damage. The electrical resistance of both the nanorings and the contacts between the rings (junctions) is taken into account. In part (i), the effects of 5 parameters on the electrical sheet resistance and optical transparency are presented. It is shown that several parameter combinations achieve better performance in comparison to indium tin oxide, currently the most widely used transparent electrode. In part (ii), due to electrical damage, the nanoring systems display the formation of a crack, running parallel to the vertical terminals, where a voltage difference is applied. The network degradation is measured by its sheet resistance, and a universal effect is observed: networks with varying filling factors exhibit the same degradation profile.
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All authors Gijs Vanoppen, Jef Hooyberghs, Wim Deferme, Bart Cleuren
Computational Physics · Cross-listed from physics.ins-det
Optimisation of importance sampling implementation in rare-event shielding simulations using Geant4
P. Knights, L. J. Milligan and K. Nikolopoulos
Rare-event search experiments demand ever-lower backgrounds, and the resulting
radio-pure materials and suppressive shielding make related background simulations computationally expensive without event biasing. We present a method for optimising the widely used importance splitting and Russian roulette technique for rare-event searches, in which a whole number of equal-width importance layers fill the shielding geometry. Balancing relative uncertainty against execution time, we optimise the layer thickness for both $\gamma$-rays and
neutrons, and across different shielding materials and thicknesses. Expressed as a multiple of the primary particle's mean free path, the optimal thickness generalises across energies for a given particle type and yields a physics-based prediction applicable to any shielding design. The same trend reveals that over-biasing is possible, with relative uncertainty worsening at high layer counts for fixed execution time. The optimal configuration gives an $\mathcal{O}$(20) gain in computational efficiency over the unbiased case.
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Computational Physics
Computing high-order mixed derivatives in physics-informed neural networks using multi-index Bell polynomials
Fumihiro Imoto
Physics-informed neural networks for high-order partial differential equations require mixed input derivatives and their gradients with respect to the network parameters. Standard implementations obtain an order-$K$ derivative by repeated automatic differentiation. We instead organize the forward recursion of the multivariate Faà di Bruno formula and its explicit backpropagation over a prescribed downward-closed set of multi-indices, with the Bell-
polynomial convolutions tabulated once. The forward pass carries only the derivatives the differential operator requires. The backward pass propagates gradients from losses formed from any subset of them, including nonlinear products and coupled fields. Both recursions are exact up to roundoff and avoid nested computational graphs. An independent Taylor-jet implementation, symbolic checks of the test problems, and finite differences verify derivatives and loss gradients through order seven. On one CPU core, the method evaluates 330 mixed derivatives with respect to four inputs through order seven and the corresponding loss gradient without the
memory failures observed for several nested implementations. Numerical tests include third-, fifth-, and seventh-order dispersive equations, incompressible flow, and a manufactured five-field electrohydrodynamic system. The seventh-order Zakharov-Kuznetsov test in $3+1$ dimensions has a relative solution error of $6\times10^{-4}$.
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Computational Physics · Cross-listed from cs.CE
What Do CAE Simulation Agents Really Need Beyond a Generic Harness?
Jiasheng Shi and Tianhan Zhang
Computer-aided engineering (CAE) simulation is among the largest and most demanding areas of engineering, where setting up a solver such as OpenFOAM, FEniCS, or COMSOL takes real expertise. Large
language model (LLM)
agents promise to turn a natural-
language request into a working simulation, and recent CAE
agents add simulation-specific machinery: multi-
agent decomposition, domain
retrieval, and scripted reflection. That machinery suited weak base models; modern harnesses already supply multi-turn
reasoning, tool use, and execution feedback. We ask what a CAE simulation
agent still needs beyond a generic harness. With information access and repair budget held fixed, a single-
agent harness matches or beats multi-
agent specialized systems (FoamBench 96.4% vs.\ 88.2%). Ablations trace this to capabilities the harness already provides: execution-feedback repair lifts FoamBench from 71.8% with no repair round to 96.4%, while scripted reflection adds nothing. The one input that still helps is domain knowledge supplied as solver tutorials, our largest measured gain (80.9% to 96.4%).
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Computational Physics · Cross-listed from physics.med-ph
HPC Modeling of Coupled Elastic-Acoustic Wave Propagation in Biological Media: Numerical Validation
Fawad Ali, Carlos García and Lapo Boschi
Accurate numerical models of sound propagation through biological media are an important tool for many applications, from medical physics to studying the auditory system of humans or other animals. We model high-frequency elastic and acoustic wave propagation through the head anatomy of a common bottlenose dolphin (Tursiops truncatus), by means of the open-source software packages specfem3d, based on the spectral-element method, and \textsc{k-wave}, based on the pseudospectral method. To achieve sufficiently high performance, we ported the latter solver to C++, for Multi-GPU CUDA support via the slab-decomposition of three-dimensional Fast
Fourier Transform approach. Because the two schemes differ fundamentally in how the propagation medium is discretized and internal (in particular fluid-solid) interfaces are treated, similarity between modeled signals across methods is a legitimate measure of model accuracy. Plane waves, depending on time like four-cycle sinusoidal bursts of varying central frequency (20–100 kHz), are numerically propagated through a computed-
tomography-based anatomy model using both solvers. The sound is “recorded” in front of the rostrum and at the right inner-ear locations for comparison. We successfully cross-validate both solvers on high-fidelity High-Performance Computing (HPC) clusters. We find that the stability of results from both solvers grows as the corresponding spatial resolution is refined. At their highest resolutions, the two methods show excellent agreement, with normalized correlation exceeding 0.99 across the entire 20–100 kHz frequency range. Together, our results provide a validated HPC-simulation framework for wave propagation in biological media, with broader implications, e.g., for biosonar research, auditory biomechanics, and medical ultrasound.
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Computational Physics · Cross-listed from quant-ph
Quantum Quasi-Monte Carlo: a window for pre-asymptotic quantum advantage
Paolo Recchia, Zhan Yu, Kelvin Koor et al. (+1 more)
Numerical integration with Monte Carlo methods is a central computational task in many scientific and industrial applications, including financial derivative pricing and risk management. Classical Monte Carlo
algorithms are computationally demanding: achieving an accuracy $\epsilon$ typically requires a number of function evaluations scaling as $O(1/\epsilon^2)$.
Quantum-accelerated Monte Carlo methods based on
quantum amplitude estimation can in principle quadratically improve this dependence. However, quasi-Monte Carlo methods have not been explored in the
quantum context. In this work, we introduce a
quantum quasi-Monte Carlo
algorithm that combines low-discrepancy nets with
quantum amplitude estimation. The proposed method prepares the quasi-random point set coherently in superposition. The method does not yield an asymptotic improvement over classical quasi-Monte Carlo, since the total error separates into a discretization error, determined by the finite net, and a
quantum estimation error. Instead, we explore a pre-asymptotic advantage window: for a target accuracy that would classically require $2^q$ low discrepancy points, one can prepare a higher-resolution net of size $2^Q$, with $Q>q$, in superposition and reach the same accuracy using significantly fewer function queries. This window can be controlled by tuning the
circuit resolution and amplitude-estimation parameters, making the approach relevant for practical regimes where the number of queries is finite rather than asymptotically large.
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All authors Paolo Recchia, Zhan Yu, Kelvin Koor, Patrick Rebentrost
Computational Physics · Cross-listed from cond-mat.stat-mech
Frenkel line of Yukawa fluids within the self-consistent relaxation theory
Ilnaz I. Fairushin and Anatolii V. Mokshin
For a simple model fluid, the Yukawa fluid, the condition for dynamic crossover, known as the Frenkel line, is defined. The condition is related to the fact that the roton minimum in the dispersion relation of longitudinal acoustic-like excitations exists only when the collective vibrational dynamics of particles dominates in the
liquid. Based on the self-consistent relaxation theory for the Yukawa fluid, thermodynamic states are determined in which the roton minimum disappears. The obtained values of the state parameters for the Frenkel line are consistent with the results of studies in which the position of this line on the phase diagram of the Yukawa fluid was determined using molecular dynamics simulations. It is shown that the Frenkel line in this system can be determined directly from the structural characteristic – the static structure factor. A physical interpretation of the roton minimum frequency for the simple
liquids near the Frenkel line is proposed.
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Computational Physics
BU-MBAR: A hybrid solution strategy for the MBAR equations
Fabio Müller, Francesco Alesiani and Henrik Christiansen
The multi-state Bennett acceptance ratio (MBAR) equations combine the data collected under different thermodynamic conditions in a statistically optimal way. Due to their practical importance, several solution strategies have been devised to optimize the convergence of the resulting set of coupled equations. However, even with graphics processing unit (GPU) acceleration, the convergence of these methods can still be either unstable or slow. We propose a new approach where the equations are interpreted as the limit of infinitesimal bin width of the respective weighted histogram analysis method (WHAM). In the proposed binned-to-unbinned MBAR (BU-MBAR) method, the bin width is adapted dynamically to ensure a stable and efficient convergence to the asymptotic solution.
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Computational Physics · Cross-listed from physics.flu-dyn
A conservative coupling method of sharp-interface and multi-species model for compressible reacting gas-liquid flows with phase change
Jiaxi Song, Yunzhang Tian and Shucheng Pan
In this paper, a conservative sharp-interface and diffuse-interface coupling method is developed for compressible two-phase multi-species flows with phase change and chemical reactions. The
liquid–gas interface is represented by a sharp-interface model, whereas a diffuse-interface model treats the transport and chemical reactions of gas-phase species. Conservation is enforced by coupling the two phases through interfacial fluxes obtained from a multi-species phase-change Riemann problem. The original single-species four-wave Riemann solver is extended to multi-species gas mixtures by modifying the interfacial energy jump condition. Interfacial mass transfer is restricted to the condensable vapor species. Accordingly, both the interfacial energy jump condition and the gas-mixture energy-exchange flux are constructed using the internal energy of the phase-changing vapor species rather than the mixture internal energy. With this species-selective energy coupling, an approximate multi-species Riemann solver is constructed that retains the four-wave structure while avoiding the multidimensional nonlinear root-finding required by the exact solution. A series of numerical tests, including impulsive evaporation and condensation, reacting aluminum vaporization, shock-droplet interaction, and detonation-droplet interaction, are performed to assess the accuracy and robustness of the method. The numerical results agree well with reference solutions and
benchmark data, demonstrating that the present method resolves the effects of phase change and chemical reactions in compressible multi-species multiphase flows while preserving conservative interfacial coupling.
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Computational Physics · Cross-listed from physics.flu-dyn
Interface-resolved simulations of boiling heat transfer
Alessio Roccon and Luca Brandt
Boiling heat transfer underpins many applications where large heat fluxes must be dissipated. Boiling is characterized by a wide range of coupled multiscale transport phenomena, making its accurate numerical prediction a long-standing challenge. In this context, interface-resolved simulation approaches - where the
liquid-vapor interface is either explicitly or implicitly described - have undergone significant advancements, driven by improved numerical formulations, more complete thermodynamic and compressibility modeling, and the growing availability of computational resources. Here, we provide a comprehensive overview of the state of the art in interface-resolved simulations of boiling flows. We examine the different formulations governing the flow and temperature field, strategies for coupling heat and mass transfer at the interface, and current modeling approaches for small-scale physics such as nucleation, microlayer evaporation, and contact-line dynamics. By analyzing insights from recent high-fidelity simulations, a central observation is that interface-resolved simulations of boiling are hydrodynamically resolved but microscopically modeled: their predictive accuracy depends on the sub-grid closures for nucleation, microlayer, and contact-line physics no less than on the fidelity of the hydrodynamic solver. We discuss the strengths and limitations of available methods on this basis, together with the open challenges in the accurate description of boiling heat transfer.
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Computational Physics · Cross-listed from gr-qc
Introducing SINFONIA: Symplectic, slimplectic and Magnusian (Neural) Flows for Orbital Numerical Integration and Acceleration
Lidia J. Gomes Da Silva
Long-duration gravitational-wave modelling must resolve fast orbital motion together with slow dissipative
evolution while preventing small numerical errors from accumulating into secular phase drift. Here we ask whether the finite-time
evolution map itself can be learned as an explicit, differentiable, structure-preserving object and then repeatedly composed through a complete inspiral. We construct three neural-flow architectures: a symplectic and slimplectic flow on Galley's doubled phase space, [SINFONIA-J0]; a Taylor-anchored flow, [SINFONIA-J1]; and a Magnusian flow that learns the finite-time dissipative correction in the interaction picture, [SINFONIA-J2]. Applied to a 2.5PN
neutron-
star inspiral, all three expose the same controlling mechanism: long-time accuracy is governed not by pointwise map error alone, but by its signed projection onto a single secular channel fixed by energy–angular-momentum balance. Encoding this structure allows the learned maps to remain accurate through $10^{2}$–$10^{5}$ window compositions to coalescence at timesteps of a full orbital period and beyond, reaching chained phase errors orders of magnitude below a
benchmark slimplectic integrator at lower cost. The same secular structure can also be exploited for physics inference: when the channel is left unconstrained, the accumulated phase retains enough information to recover an un-modelled dynamical-friction-like force, both parametrically and as a learned function of separation. Network-off controls isolate the contribution of learning from the analytic structure already built into each map. These results establish a proof of concept for structure-preserving learned
evolution maps as tools for fast long-duration integration and physics inference in gravitational-wave source modelling.
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