Accelerator Physics
Adaptable phase retrieval for coherent transition radiation spectroscopy based on differentiable physics information
Ritz Ann Aguilar, Maxwell LaBerge, Andreas Doepp et al. (+6 more)
Coherent transition radiation (CTR) spectroscopy is a critical diagnostic for characterizing the longitudinal structure of relativistic electron bunches in
laser-
plasma and conventional accelerators. In practice, recovering the bunch profile from a measured CTR spectrum is an ill-posed phase-
retrieval problem. Traditionally, this is addressed using Gerchberg-Saxton (GS)-type iterative
algorithms. However, these implementations often rely on explicit inverse propagators, making them difficult to adapt to sophisticated experimental forward models. In this work, we introduce a flexible gradient-based framework for CTR phase
retrieval. By leveraging a differentiable forward model, we propose a phase-only gradient descent (GD-Phase) approach that enforces the measured spectral amplitude as a hard constraint while optimizing the
Fourier phase under physical real-space priors. Using synthetic CTR spectra spanning multi-peaked and strongly modulated profiles, we
benchmark GD-Phase against traditional GS and a real-space amplitude-parametrized gradient descent (GD-Amp)
algorithm. Unlike traditional methods, this formulation allows for the seamless inclusion of arbitrary differentiable experimental effects into the reconstruction loop. We demonstrate that this physics-informed approach not only reproduces the fidelity of GS methods but also establishes a robust baseline for incorporating multi-diagnostic constraints and uncertainty quantification. This enables the systematic extension to higher-dimensional,
multimodal, and uncertainty-aware diagnostics, facilitating fast and scalable phase
retrieval in realistic experimental settings.
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All authors Ritz Ann Aguilar, Maxwell LaBerge, Andreas Doepp, Alexander Debus, Zewu Bi, Michael Bussmann, Arie Irman, Ulrich Schramm, Jeffrey Kelling
Optics
Submicrometer focusing of isolated attosecond XUV pulses approaching 10$^{16}$ W/cm$^2$
Kotaro Imasaka, Dianhong Dong, Natsuki Kanda et al. (+6 more)
We demonstrate submicrometer focusing of isolated attosecond pulses (IAPs) in the extreme ultraviolet (XUV) region using a custom ellipsoidal mirror. The obtained focal spot sizes were verified using knife-edge measurements with a sharp silicon edge, confirming reproducible dimensions down to 0.46 $\mu$m $\times$ 0.36 $\mu$m (FWHM), approaching the diffraction limit. Focusing a 1.1-GW tabletop IAP source yields a peak intensity of 3 $\times$ 10$^{15}$ W/cm$^2$, and a realistic pathway toward 10$^{16}$ W/cm$^2$ is obtained by optimizing the beamline throughput. These results establish a practical route toward attosecond nonlinear optics in both gas and solid phases, driven by intense XUV fields.
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All authors Kotaro Imasaka, Dianhong Dong, Natsuki Kanda, Bing Xue, Satoru Egawa, Takuya Hosobata, Yutaka Yamagata, Yasuo Nabekawa, Eiji J. Takahashi
Optics · Cross-listed from cond-mat.mtrl-sci
Probing sliding ferroelectricity in bilayer T$_\mathrm{d}$-WTe$_2$ with high-harmonic generation
Elias Greil, Alba de las Heras, Angel Rubio et al. (+1 more)
High-harmonic generation is a sensitive all-optical probe of
symmetry and electron dynamics in solids. Here, we use first-principles time-dependent density functional theory (TDDFT) to study high-harmonic generation in T$_d$-WTe$_2$, a two-dimensional semimetal with switchable out-of-plane ferroelectric polarization driven by interlayer sliding. We show that the mirror-
symmetry breaking underlying the ferroelectric state produces robust signatures in polarization-resolved high-harmonic spectra, enabling optical identification of the polarization state. By incorporating interlayer shear motion in coupled electron-
lattice TDDFT simulations, we further show that the 0.24 THz shear mode is slow enough to remain effectively decoupled from the ultrafast electronic response responsible for harmonic emission. Our results establish high-harmonic spectroscopy as a non-invasive probe of sliding ferroelectricity and
lattice symmetry in two-dimensional
quantum materials.
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All authors Elias Greil, Alba de las Heras, Angel Rubio, Anna Galler
Data Analysis and Statistics
Emergent Self-Attention from Astrocyte-Gated Associative Memory Dynamics
Arnau Vivet and Alex Arenas
We introduce a Hopfield-type associative
memory in which effective connectivity is multiplicatively modulated by astrocytic gains evolving under an
entropy-regularized replicator equation. The coupled
neuron-astrocyte dynamics admit a Lyapunov function, ensuring global convergence. At fixed points, astrocytic gains implement a softmax-normalized allocation over pattern similarity scores, yielding a mechanistic realization of self-
attention as emergent routing on the gain simplex. In regimes of high
memory load and interference, the model significantly improves
retrieval accuracy relative to classical Hopfield dynamics and recent
neuron-astrocyte baselines. These results establish a dynamical systems framework linking glial modulation, competitive resource allocation, and
attention-like computation.
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Optics · Cross-listed from quant-ph
Quantum Compressed Sensing Enables Image Classification with a Single Photon
Yanshan Fan, Jianyong Hu, Shuxiao Wu et al. (+9 more)
Image classification is a core task of intelligent sensing, conventionally follows a sequential imaging then processing pipeline. However, redundant high-dimensional image reconstruction is inherently inefficient, especially in
photon limited scenarios. Here we report a
photon level image classification method using
quantum compressed sensing, which reformulates the classification task as a sparse signal measurement problem directly oriented toward class labels. By exploiting the parallelism of photonic
quantum superposition states, a single
photon can be encoded the complete spatial information of a high-dimensional image. Through a diffractive deep neural network, we physically construct a dedicated measurement basis aligned with the class space, enabling signal-dependent adaptive compressive measurement. Ideally, our method can extract class information via a single
quantum projective measurement, reducing the required number of measurements from the logarithmic scaling O(Klog(N/K)) of classical compressed sensing to the constant-order information-theoretic limit M = K = 1. Experimental results show that a classification accuracy of 69.0% can be achieved by using a single-
photon detection event as the decision criterion, while it increases to 95.0% with four-
photon detection events. This work demonstrates image classification at the energy efficiency limit and introduces a measurement as decision framework. It provides a foundation for intelligent sensing systems that operate under extreme
photon budgets and harsh environments.
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All authors Yanshan Fan, Jianyong Hu, Shuxiao Wu, Zhixing Qiao, Guosheng Feng, Changgang Yang, Jianqiang Liu, Ruiyun Chen, Chengbing Qin, Guofeng Zhang, Liantuan Xiao, Suotang Jia
Optics
Polarization-preserving wavefront rotator
Suman Karan, Aman Srivastava, Pratham Sachin Todkar et al. (+1 more)
A K-mirror rotates the wavefront of an incident optical field. However, the rotation always introduces polarization changes in the transmitted field. This is a serious concern for applications ranging from astronomical image derotation to orbital angular momentum spectrum characterization in photonic
quantum technology. Recent efforts have shown that the polarization change can be minimized significantly, but these require either a very small base angle that limits the field of view, or mirrors with a customized refractive index. Making the transmitted polarization state completely independent of the rotation angle has remained an open problem. In this work, we show that placing half-wave plates before and after a K-mirror and rotating them synchronously at half the K-mirror rotation angle makes the polarization change in the transmitted field exactly independent of the rotation angle. This works for any wavefront rotator, any base angle, any mirror refractive index, and any input state of polarization. We experimentally demonstrate the approach using a K-mirror with a base angle of $30^{\circ}$, which gives the largest field of view among practical designs, and find a mean polarization error of ~1%, limited only by the retardance imperfection of commercially available half-wave plates. This has significant practical implications for applications that require precise wavefront rotation without polarization change.
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All authors Suman Karan, Aman Srivastava, Pratham Sachin Todkar, Anand K. Jha
Fluid Dynamics
Control-oriented cluster-based reduced-order modelling
Paolo Olivucci, David E. Rival and Richard Semaan
This work addresses the challenge of learning reduced-order models (ROMs) capable of generalizing to unobserved dynamical regimes across unseen control parameters. We introduce the Control-oriented Cluster-based Network Model (CNMc), a framework for synthesizing reduced-order dynamics at held-out operating conditions without requiring simulation data at those conditions. While the traditional Cluster Network Model (CNM) is limited to observed regimes, CNMc enables generalization by fitting supervised regression models to the transition probabilities and transition times of the CNM as functions of the control parameter. A key enabler is a Procrustes transformation that maps each operating condition's state space to a common coordinate system in which trajectories across all conditions are standardised and shape-aligned, permitting a shared cluster partition to be learned. We evaluate CNMc on two fluid dynamics
benchmarks, the Lorenz-63 system and a controlled turbulent boundary layer, demonstrating that the predicted statistics at the withheld condition closely match those of a CNM trained directly on test data. CNMc also outperforms the competing interpolation-based CNM approaches under identical conditions. These results represent a step toward parameter-aware ROMs suitable for real-time flow control and the acceleration of parametric design studies.
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Plasma Physics · Cross-listed from astro-ph.HE
Rotation Measure Substructures Induced by the Ponderomotive Force of Inertial \alfven Waves
Qing Zhao, Di Xiao and Xue-Feng Wu
The rotation measure (RM) and dispersion measure (DM) of fast
radio bursts (FRBs) serve as critical probes of the magneto-ionic environments along the line of sight. The significant temporal
evolution of RM observed in some repeating FRBs is generally attributed to the local environment of the source, since the intergalactic medium is not expected to vary on such short timescales. Recent observations of repeating FRB 20201124A and FRB 20220529 exhibit complex RM phenomenology, including large-amplitude global fluctuations and short-term substructures. Here, we attribute these short-term RM variations to the ponderomotive force exerted by inertial \alfven~waves (IAWs). We propose that IAWs, generated via
magnetic reconnection or turbulent cascades in a low-$\beta$
plasma, induce nonlinear density perturbations in the source environment. We demonstrate that the resulting
plasma density redistribution can produce RM suppression consistent with observed substructures. This model presents a physically motivated mechanism for the short-term RM variability observed in active repeaters. It demonstrates that such fluctuations can arise from wave-driven density cavitation within a broad, coupled parameter space involving wave amplitude,
plasma density, and temperature, thereby characterizing the localized
plasma dynamics required to produce the observed RM jitters.
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Chemical Physics
Excitation of Low-Frequency Modes and the Effects of Protein Dynamics on Spectral Densities of Bacteriochlorophyll Molecules
Sayan Maity, Tristan A. Mauck and Ulrich Kleinekathöfer
In the theory of open
quantum systems, spectral densities are key quantities for modeling the dynamics and spectroscopic properties of the system under investigation. In the case of light-harvesting complexes, they encode the frequency-dependent coupling of electronic excitations in pigment molecules to their environment, reflecting contributions from both intrinsic vibrational modes and the
protein surrounding. In particular, the low-frequency components of the spectral densities are crucial for
exciton transfer between pigment molecules. Apparently, slow internal modes of bacteriocholophyll molecules in the gas phase are less well represented by common force fields based on classical molecular dynamics (MD) simulations. Here, we demonstrate that Born-Oppenheimer molecular dynamics (BOMD) based on the numerically efficient density functional-based tight-binding approach can accurately recover these low-frequency features, whereas normal mode analysis captures them only partially. In contrasting approaches for determining spectral densities, the low-frequency region of the spectral densities obtained is only associated with
protein fluctuations; the usage of BOMD, however, also captures the low-frequency contributions arising from slow intramolecular vibrations of the pigment molecules themselves. Notably, this behavior is consistently observed for both the flexible B800 and the more rigid B850 rings in light-harvesting 2 (LH2) complexes of purple bacteria, as well as in the Fenna-Matthews-Olson (FMO) complex of green sulfur bacteria. Interestingly, we also find that the spectral densities of the pigments in the B850 ring of LH2 are not influenced by the environment, i.e., the gaps between ground and first excited state are not changed significantly by the fluctuations of the
protein environment.
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Atmospheric and Oceanic Physics
Evaluating local climate in global storm-resolving models with the Köppen-Geiger classification
Chiel C. van Heerwaarden, Menno A. Veerman, Imme Benedict et al. (+11 more)
Global storm-resolving models aspire to become digital twins of the Earth, delivering information at the local scale at which humans experience
climate. We evaluated how well two such models, ICON and IFS-FESOM, reproduce the
climate as classified by the Köppen-Geiger system, using 30-year (2020-2049) simulations from the nextGEMS project at 9~km global resolution under SSP3-7.0 scenario. Both models capture the global distribution of the five main
climate categories, encouraging given the infancy of storm-resolving
climate modelling. Substantial regional biases nonetheless remain. Both underestimate tropical rainforest (Af) extent due to insufficient dry-month precipitation in Amazonia and equatorial Africa. ICON almost eliminates hot arid desert (BWh) across Australia through excessive precipitation, while IFS-FESOM reproduces it well. The two models show opposing biases along the temperate–continental boundary: IFS-FESOM winters are too cold in western Europe, ICON winters too warm. Substituting observed temperature or precipitation into the model fields reveals that precipitation errors dominate misclassification, while temperature biases play a secondary role confined to mid-latitude
climate zone boundaries. Under
climate change, the two models and CMIP6 projections agree on the direction of
climate zone shifts: expansion of tropical savanna and hot desert at the expense of subarctic, tundra, and ice cap zones. However, inter-model differences in present-day
climate exceed the 30-year
climate change signal for many zones, calling for caution in regional projections and adaptation planning. Our results expose where local-scale
climate representation still falls short of the digital twin ambition, while confirming that storm-resolving models already perform well across many regions. We propose Köppen-Geiger classification as a standard diagnostic to help track further progress.
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All authors Chiel C. van Heerwaarden, Menno A. Veerman, Imme Benedict, Lukas Brunner, Edgar Dolores-Tesillos, Emanuel Dutra, Erich Fischer, Junhong Lee, Olivia Martius, Xabier Pedruzo-Bagazgoitia, Ulrike Proske, Sarah N. Warnau, Jonathan D. Willie, Cathy Hohenegger
Biological Physics
Analysis of DNA thermal stability across a broad range of thionine concentrations
Evgeniya Usenko, Alexander Glamazda, Vladimir Valeev et al. (+1 more)
Interest in studying the interaction of small molecules with DNA is caused by the need to develop new, highly effective, and low-toxic drugs for cancer treatment. The strong and highly specific binding of thionine with DNA makes it a promising candidate for use in medicine and pharmacology. In this study, DNA-thionine complexes in aqueous solutions were investigated using UV-Vis absorption spectroscopy. The thermal stability of native DNA was studied in a broad range of thionine concentrations. The mechanisms of thionine binding to DNA, depending on the concentration of thionine, have been established. At low thionine concentrations $([c_{th}] \le 1.5 \text{ mg/L})$, thionine molecules intercalate between the base pairs of the DNA double helix. At a thionine concentration of 1.5-10 mg/L, the groove binding and external electrostatic interaction of positively charged thionine with negatively charged biopolymer phosphate groups of the DNA backbones is preferable. In all cases, the interaction of thionine with DNA leads to an increase in the thermal stability of the polynucleotide. These findings provide valuable insight into the concentration-dependent molecular mechanisms of DNA-small molecule interactions, supporting the rational design of anticancer and antimicrobial
agents, as well as exploiting molecular probes for nucleic acid detection, imaging, and other biomedical applications.
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All authors Evgeniya Usenko, Alexander Glamazda, Vladimir Valeev, Victor Karachevtsev
Computational Physics
Deterministic Realization of Classical Dissipation on Quantum Computers
Muhammad Idrees Khan, Sauro Succi and Hua-Dong Yao
Lattice Boltzmann (LB) on
quantum devices must reconcile
unitary gate
evolution with the dissipative collision step. In the multiple-relaxation-time (MRT) class, we work in the common setting of modewise diagonal moment relaxation, $\delta m_r'=\lambda_r\,\delta m_r$ with $\lambda_r\in[-1,1]$ (overrelaxation if $\lambda_r<0$).
Embedding that contraction in a
unitary by block encoding or a linear combination of
unitaries (LCU) typically yields subunitary success probability that decays multiplicatively across modes, sites, and time, a key bottleneck for
quantum LB. For the dissipative MRT block alone we give a block-encoding-free construction: a signed two-rail population encoding, then a completely positive trace-preserving (CPTP) map (per-rail amplitude damping with survival $|\lambda_r|$ and, if $\lambda_r<0$, a rail SWAP) so that, after the decode, the map agrees with classical MRT relaxation exactly (expectations of the rail number operators, common encoding–decode scale). Trace preservation gives success probability $1$ for that substage. The main result is the dissipative MRT block; construction of the
equilibrium moment vector~$m^{\mathrm{eq}}=Mf^{\mathrm{eq}}$ (prescribed~$f^{\mathrm{eq}}$, host moment
matrix~$M$; notation as in Section~\ref{subsec:generic-mrt}), moment transforms, streaming, and boundaries are composed with it as in a standard host pipeline and lie outside the scope of the formal
theorem. Hybrid and fully coherent encodings, adaptive scales, Carleman-based context, and a one-rail no-go in the same nonnegative population framework are in the main text. Audits of the open-channel map on a long LBM collide-stream simulation and on stencil-free inputs both match the target to machine precision.
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Plasma Physics
Augmented reality system for visualising magnetic field topology and charged-particle trajectories in magnetic fusion plasmas
Akinobu Matsuyama
A cost-effective augmented reality (AR) system is presented for visualising three-dimensional
magnetic field structures and charged-particle trajectories in magnetically confined fusion
plasmas. The system presented in this study integrates an orbit-following simulation code with a marker-based AR framework using a web camera and the OpenCV library. By synchronizing the time step of the simulation with the frame rate of the camera, the trajectories are continuously updated and superimposed in real time onto the camera image. Through the interactive operation of manipulating the web camera, users can observe three-dimensional structures, such as
magnetic islands, from various positions and viewing angles. Such an AR environment supports an interactive means of exploring three-dimensional spatial structures that can be difficult to interpret from two-dimensional representations alone. It also provides a common visual representation that can be shared through a display by researchers and students with diverse backgrounds in physics, engineering, and related fields. The developed system has been used in practical exercises at the JT-60SA International Fusion School, with exploratory feedback from students.
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Optics · Cross-listed from quant-ph
Elucidating mechanism of optical cavities in superconducting strip single photon detectors using transmission line and impedance models
Hiroki Kutsuma and Taro Yamashita
We clarified the physical mechanism of superconducting strip single
photon detectors (SSPDs) with optical cavities by using transmission line and impedance models. By introducing the transmission line model, we derived the analytical formulae for the absorptance of SSPDs with optical cavities. We compared the absorptance obtained from the analytical formulae for SSPDs with single-side, double-side, and dielectric multi-layer optical cavities against the results of numerical simulations. The comparison showed that the results were nearly identical. By introducing the impedance model, it was clearly shown that the SSPDs with optical cavities achieved the maximum absorptance when their input impedance of the SSPDs with optical cavities matched the impedance of the input medium. The design concepts proposed in this study are applicable to other superconducting detectors, such as microwave kinetic inductance detectors and transition-edge sensors.
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Optics · Cross-listed from cond-mat.mes-hall
Synthetic Polariton Matter in the solid state
Sylvain Ravets
Synthetic materials are obtained by assembling atoms or artificial atoms into regular arrays, thereby forming artificial
crystals that offer powerful platforms to emulate and explore condensed-matter phenomena in highly controlled settings. They enable probing outstanding questions in many-body physics and designing new phases of matter with no direct analogue in nature. Beyond their fundamental interest, these materials hold potential for future technological applications through the emergence of novel concepts and functionalities. Synthetic materials have been engineered using a wide range of physical platforms, including both natural atoms and fabricated artificial atoms in the solid-state. A particularly intriguing approach relies on
photons. When confined in optical cavities and strongly coupled to matter excitations,
photons acquire an effective mass and can experience interactions, giving rise to hybrid light-matter quasiparticles known as polaritons. By arranging polaritons in periodic structures, one can engineer synthetic photonic materials with tailored band structures and controllable interactions, offering a promising route toward exploring strongly correlated photonic phases. This chapter focuses on a solid-state realization of such systems:
exciton polaritons confined in
semiconductor microcavities. Following a general introduction, we describe how
photon mass and photonic band structures emerge from cavity confinement, and how interactions arise via strong coupling to
excitons in
quantum wells. We finally review how these ingredients can be used to explore rich physics from the mean-field to the
quantum regime.
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Optics · Cross-listed from nlin.PS
Space-time excitation creates soliton trains in multimode fibers
Julien Dechanxhe, Spencer W. Jolly and Pascal Kockaert
In this work, we show that injecting a single space-time-coupled light pulse-beam into a multimode graded-index fiber generates a train of multimode
solitons. Space-time couplings excite the spatial modes with distinct temporal profiles. Due to nonlinear interactions, with a properly chosen input power these profiles split into several unique multimode
solitons. In the case of a spatially chirped input pulse, two
solitons composed of modes $LP_{01}$ and $LP_{11}$ are formed. In the case of the injection of a space-time optical
vortex, characterized by its topological charge $\ell$, a train composed of $|\ell| + 1$ multimode
solitons is generated. Their energy and modal composition are directly determined by the absolute value of the topological charge.
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Physics and Society
Universal Features in Atmospheric Particulate Matter Dynamics
Suchismita Banerjee, Koyena Ghosh, Urna Basu et al. (+1 more)
We study statistical properties of atmospheric particulate matter fluctuations using six years of daily PM2.5 concentration data from fifty-four Indian cities. Despite diverse urban settings and heterogeneous climatic conditions, we find that the fluctuations show strikingly universal behaviour in both the distributional properties and temporal dynamics. After removing slow trends and seasonal components, the rescaled probability density functions of the residual fluctuations collapse onto a single curve and are well described by an exponentially modified Gaussian distribution. The rescaled residual time-series for all the cities further exhibit certain robust dynamical features, with similar decay of auto-correlation functions, and power spectral densities displaying a similar 1/f decay at the tails. Finally, we propose a minimal
stochastic model for the residual dynamics, which explains the observed universal features – the stationary distribution, temporal correlation, and spectral scaling.
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All authors Suchismita Banerjee, Koyena Ghosh, Urna Basu, Banasri Basu
Computational Physics · Cross-listed from nlin.CD
Transmitted and Storage-Dominated Resonance in Fractionally Damped Unidirectionally Coupled Duffing Oscillators
Messali Rouaida, Mattia Coccolo and Miguel A.F. Sanjuán
This paper investigates resonance transmission in two unidirectionally coupled Duffing oscillators with fractional damping, where the driver is harmonically forced and the receiver is connected through a linear coupling spring. Particular
attention is paid to how fractional damping in the receiver modifies amplitude amplification, energy redistribution, and the structure of the coupled response. The numerical results reveal a clear distinction between transmitted resonance, associated with a coupling-power balance consistent with direct energy transfer through the coupling spring, and storage-dominated resonance, in which the receiver still exhibits a pronounced oscillatory response while the time-averaged coupling power becomes negative under the adopted convention. In this latter regime, fractional
memory promotes temporary energy accumulation within the receiver–coupling subsystem, followed by partial release through the coupling spring without any feedback on the driver dynamics. We further show that detuning the receiver natural frequency enhances the interaction between the lower-frequency transmitted response and the higher-frequency coupled response, leading to a superposed resonance regime with increased receiver amplitude, stronger localization, and sharper response. The roles of the fractional order, coupling strength, and receiver natural frequency are systematically analyzed through frequency-response curves and parametric maps. Overall, the results show how fractional
memory can be used to tune resonance transmission, energy localization, and amplified response in coupled nonlinear oscillators.
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Medical Physics
Effect of the dose distribution and organ architecture on the toxicity in FLASH radiotherapy: a modeling study
Juan Pardo-Montero
Objective: This study aims to investigate the influence of organ architecture (specifically the distinction between serial and parallel tissue) on the protective FLASH effect when organs are irradiated with inhomogeneous dose distributions. Approach: An in silico modeling framework was developed using two distinct methods to calculate the effective FLASH dose: the first method utilized a biophysical model of radiolytic oxygen depletion (ROD); the second employed a phenomenological logistic function where the effective FLASH dose is a function of local dose and dose rate. Both models assume that the underlying mechanism behind the FLASH effect is local. Normal Tissue Complication Probability (NTCP) for heterogeneous dose distributions was calculated using the Lyman-Kutcher-Burman (LKB) model and the generalized equivalent uniform dose, varying the volume effect parameter n from 1.0 (parallel) to below 0.01 (serial) to explore different architectures. Results: Both the ROD and phenomenological models showed FLASH sparing compared to conventional radiotherapy. Also, the sparing increased with decreasing $n$ (the sparing is more important for serial organs). For example, for a specific calculation, when the NTCP for conventional radiotherapy was 0.2 (set value) the corresponding NTCP for FLASH delivery ranged from 0.14 for n=1 to 0.11 for n=0.1. Significance: Our results indicate that if the underlying mechanism/s behind the FLASH effect is/are local, the toxicity sparing associated to FLASH-RT can be dependent on the architecture of the irradiated organ/tissue, being more important for serial organs, which are more sensitive to large local doses than to average doses.
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Fluid Dynamics
The Wooding problem revisited
A. Barletta and D. A. S. Rees
The threshold conditions to convective instability in a semi-infinite porous layer saturated by a fluid are determined. The classical setup for this problem in geothermal fluid dynamics was originally modelled by Wooding in 1960. Its formulation is here reconsidered to allow for an imperfect heat transfer across the boundary, parametrised through the Biot number. The temperature boundary condition considered by Wooding is here recovered as the limit of an infinite Biot number. The linear stability analysis of the stationary boundary layer which establishes in the porous medium when a boundary steady suction occurs is carried out. Two different versions of the Rayleigh number are considered, namely, a temperature-difference-based version and a heat-flux-based version. While the former is the classical Rayleigh number for flow in porous media, the latter is a variant definition which displays a finite limit at neutral stability in both the opposite limiting cases of an infinite or of a zero Biot number.
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Medical Physics
Unsupervised Physics-Informed Deep Learning for Dual-Energy CT Material Decomposition
Laura Hellwege, Johann Christopher Engster, Moritz Schaar et al. (+2 more)
Dual-energy computed
tomography (DECT) enables material-specific imaging through acquisitions at two different X-ray energy spectra. Material decomposition from DECT data is an ill-posed inverse problem that is highly sensitive to noise amplification. Conventional methods face challenges regarding accuracy and computational efficiency. We present a novel physics-informed deep learning (DL) framework for DECT material decomposition that eliminates the requirement for ground-truth material images during training. Our approach incorporates a polychromatic forward model into the training pipeline, enabling the network to learn the decomposition mapping by minimizing discrepancies in the projection domain. We validate our method on the AAPM DL-Spectral CT Challenge
dataset, comparing performance against three state-of-the-art methods. In the projection domain, our method achieves the lowest root mean squared error (RMSE) across test
datasets. For virtual monoenergetic images (VMIs) at 30 keV, 50 keV, and 70 keV, the approach consistently outperforms all conventional methods in both RMSE and structural similarity index (SSIM). These results demonstrate the potential of DL for accurate material decomposition in DECT without requiring labeled training data.
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All authors Laura Hellwege, Johann Christopher Engster, Moritz Schaar, Thorsten M. Buzug, Maik Stille
Fluid Dynamics
Inertial focusing of neutrally buoyant spherical particle in shallow microchannels
Guiquan Wang, Willem Van Roy, Chengxun Liu et al. (+2 more)
This study investigates the lift force acting on a finite-size, neutrally buoyant spherical particle suspended in a
liquid while flowing through a shallow channel at low Reynolds numbers. Using an immersed boundary method, we calculate the lift force for particle radius-to-channel height ratios spanning \(0.03 \leq a/H \leq 0.35\) in 2D planar Poiseuille flows. We propose an explicit formula that accurately predicts the lift force for particles as large as \(a/H = 0.35\) and remains valid for particle Reynolds number \(Re_p \leq 1\), despite a reduction in near-wall lift force at higher \(Re_p\). The influence of slip boundary conditions is also explored, demonstrating that increased slip length reduces near-wall lift force and shifts the particle
equilibrium position closer to the wall. Predictions of the particle trajectory from the derived model are in good agreement to the published experimental data. These findings offer a practical framework for estimating the migration of large particles in microfluidic devices.(This article has been accepted for publication in Physics of Fluids. After publication, it will be available via the AIP Publishing website.)
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All authors Guiquan Wang, Willem Van Roy, Chengxun Liu, Tim Stakenborg, Benjamin Jones
Classical Physics · Cross-listed from cond-mat.soft
Electrohydrodynamic lubrication theory for an immersed cylinder moving near wall
Anirban Chatterjee, Yacine Amarouchene and Thomas Salez
The free motion of charged colloids within ionic solutions and in the vicinity of charged boundaries, is a phenomenon that occurs in various natural, biological and industrial settings. Here, we develop an electrohydrodynamic lubrication theoretical framework, in order to characterize such a motion in the case of an infinite rigid cylinder near a rigid wall. Combining hydrodynamic lubrication theory, Debye-H\”uckel electrostatics, and Nernst-Planck electrokinetics, we derive the three coupled equations of motion for the normal, longitudinal and rotational degrees of freedom of the cylinder, which are then investigated numerically and through asymptotic analysis. Our results reveal complex behaviours, beyond existing asymptotic electroviscous-lift expressions, and extend the classical Faxen-Brenner-like mobility
matrix when surface charges and dissolved ions are incorporated.
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Plasma Physics
Theoretical Analysis and PIC Simulations of Electromagnetic Wakefields Excited by Relativistic Beams in Magnetized Plasmas
Ali Asghar Molavi Choobini and Mehran Shahmansouri
This study presents theoretical and numerical investigation of the coupled longitudinal and radial wakefields excited by ultrarelativistic electron beams propagating through a cold
plasma channel subjected to an external axial
magnetic field. A fully causal three dimensional Green function formalism is developed directly from the linearized Maxwell fluid equations in the presence of the magnetized
plasma dielectric tensor. This unified framework captures the complete electromagnetic response, including the induction of a transverse
plasma current and the resulting hybridization of longitudinal charge separation dynamics with cyclotron driven transverse motion. The analytical treatment reveals how magnetization modifies the effective restoring forces, enhances wake amplitudes, and reshapes the radial focusing defocusing structure of the wake. To validate the theoretical predictions and explore realistic parameter regimes, extensive three dimensional particle in
cell simulations are performed using the EPOCH code across wide ranges of
plasma density,
magnetic field strength, beam Lorentz factor, transverse beam radius, and longitudinal current profiles. The simulations demonstrate excellent quantitative agreement with the analytical Green function solutions, confirming that increasing
plasma density substantially amplifies the initial wake amplitude while accelerating the damping of higher order oscillations. Application of an external
magnetic field induces coherent high frequency radial oscillations, strengthens focusing forces, and produces a hybrid eigenmode whose properties are absent in the unmagnetized limit. Variations in the driver Lorentz factor lead to rapid convergence toward a universal ultrarelativistic wake structure, while the transverse beam profile controls the radial extent and balance between longitudinal acceleration and transverse focusing.
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Plasma Physics
Second Harmonic Generation Through Backward Raman Scattering in Magnetized Plasmas Driven by Circularly Polarized Intense Lasers
S. S. Ghaffari-Oskooei and A. A. Molavi Choobini
A fluid-based theoretical framework is developed to describe the nonlinear cascade linking primary BRS-driven
plasma wave amplification, oscillating two-stream instability (OTSI), nonlinear current generation within a self-formed ponderomotive channel, and radiation of the secondary electromagnetic mode. Systematic parameter studies reveal a strong sensitivity of the entire cascade to the relative handedness of
laser polarization and axial
magnetic field direction, as well as to cyclotron resonance strength. Resonant right-handed circular polarization significantly enhances ponderomotive expulsion, channel depth, BRS and OTSI growth rates, nonlinear current density, and the amplitude of the secondary harmonic, whereas non-resonant left-handed polarization effectively suppresses these processes. Fully kinetic particle in
cell simulations using EPOCH, together with macroscopic finite-element modelling in COMSOL Multiphysics, corroborate the polarization- and magnetization dependent wake modulation and channelling efficiency across a wide range of
laser wavelengths, pulse durations, and
plasma densities. The temporal
evolution and saturation of OTSI, resilience to density inhomogeneities, and wavenumber-resolved resonance tuning illustrate axial magnetization as a flexible control mechanism for adjusting the intensity, spectral position, bandwidth, and stability of multi peak Raman spectra. These findings demonstrate that cyclotron resonance and polarization control are effective methods for manipulating nonlinear Raman emission in high-intensity
laser magnetized
plasma interactions, offering predictive insights for forthcoming kinetic simulations and experimental implementations.
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Instrumentation and Detectors · Cross-listed from cond-mat.supr-con
High-field magneto-optical imaging of superconducting critical states beyond 10 T using a paramagnetic garnet sensor
Yuto Kinoshita, Masayuki Toyoda, Yoshiaki Kobayashi et al. (+2 more)
Spatially resolved characterization of the critical current density Jc in
superconductors under high
magnetic fields is crucial for both fundamental understanding and practical applications. However, conventional techniques primarily provide bulk-averaged values, making it difficult to resolve local variations of Jc, especially in high
magnetic fields. In this work, we develop a magneto-optical imaging (MOI) technique that enables visualization of superconducting critical states in steady
magnetic fields up to 13 T. This is achieved by employing a paramagnetic Nd-garnet indicator combined with a polarizing microscope system. Using this method, we directly image the
magnetic flux distribution in a bulk single
crystal of an iron-based
superconductor Ba(Fe1-xCox)2As2 (x = 0.075) at 12 K and 20 K across the entire sample area (approximately 1 mm). From the measured
magnetic field distributions, we quantitatively reconstruct the spatial distribution of the critical current density. The extracted field dependence of Jc is in good agreement with that obtained from conventional magnetization measurements. Furthermore, we demonstrate vector mapping of current flow within the sample by converting the
magnetic field distribution into local current-density distributions. Our results establish high-field MOI as a powerful approach for spatially resolved evaluation of superconducting critical states and provide a new pathway for investigating inhomogeneous current transport in
superconductors under high
magnetic fields.
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All authors Yuto Kinoshita, Masayuki Toyoda, Yoshiaki Kobayashi, Masayuki Itoh, Masashi Tokunaga
Chemical Physics · Cross-listed from cond-mat.mtrl-sci
Benchmarking Universal Machine-Learned Interatomic Potentials for High-Temperature Metal-Organic Framework Chemistry
Connor W. Edwards and Jack D. Evans
Universal machine-learned interatomic potentials (uMLIPs) offer a promising approach to performing atomistic simulations at near-DFT accuracy with greatly reduced computational cost. Here, we present a new high-temperature benchmarking
dataset of 40~ps ab~initio molecular dynamics (AIMD) trajectories simulated at 300, 1000, and 2000 K for nine zinc- and zirconium-based metal-organic frameworks (MOFs): ZIF-8, CALF-20, MOF-10, MOF-5, MIP-206, UiO-66, UiO-67, UiO-66-NH2, and NU-1000. These trajectories capture
equilibrium dynamics, thermally induced distortions, and early-stage decomposition events, including linker degradation and metal node aggregation. Subsequently, we use this
dataset to
benchmark five leading uMLIPs: ORB-v3, MACE-MP-0a, MACE-MPA-0, fairchem ODAC23, and fairchem OMAT. Our results reveal that ORB-v3 and fairchem OMAT achieve the lowest energy, force, and stress errors across all temperatures. However, all models exhibit significant error under high-temperature conditions. Long-timescale molecular dynamics simulations produced with ORB-v3 demonstrate that the generative error of uMLIPs far exceeds model losses captured during static validation, highlighting the limitations of current universal models for simulating high-temperature MOF dynamics. This work provides a
benchmark for assessing the robustness of uMLIPs in extreme regimes and guides future development of potentials capable of accurately modeling the chemistry of high-temperature MOF dynamics.
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Fluid Dynamics
From wake dynamics to energy consumption in free-swimming biohybrid robotic jellyfish: a multiscale analysis
Simon R. Anuszczyk, Kyra Phaychanpheng and John O. Dabiri
Measuring energy consumption of marine organisms often requires enclosing the animal in a small, sealed chamber to quantify changes in oxygen concentration of the surrounding water. This can limit measurements of free-swimming organisms by introducing recirculation effects and movement restrictions. We experimentally investigate free-swimming jellyfish energy consumption at two scales: individual pulses and multi-day swimming. Prescribing pulse frequency using onboard microelectronic swim controllers enables comparison of wake energetics across stroke frequencies while allowing continuous swimming. On the microscale, we quantified pulse wake hydrodynamics using three-dimensional Particle Image Velocimetry. Electrical stimulation increased posterior wake energy loss 2.9 times compared to unstimulated jellyfish due to higher pulse rates and altered kinematics. On the macroscale, we used a 6-meter, 13,600-liter tank and tracking-based feedback control to enable continuous swimming against flow over 2.55 km without encountering tank limits. A non-invasive technique quantified changes in 3D morphology without feeding, and volume changes were converted to energy consumption using elemental analysis. Free-swimming, electrically stimulated animals consumed 2.5 times more energy than similarly stimulated animals in a constrained environment, consistent with hydrodynamic and behavioral differences including increased speed and reduced boundary effects. These results suggest hydrodynamic drag may be underrepresented in confined experimental studies.
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Computational Physics · Cross-listed from quant-ph
Hardware Realization of a Hamiltonian Simulation Algorithm for Time-Domain Maxwells Equations
Gautam Sharma, Apurva Tiwari, Niladri Gomes et al. (+3 more)
We present the first
quantum-hardware implementation of a
Hamiltonian simulation
algorithm that produces signed vector-field solutions to the time-domain Maxwells equations using a Schrodingerisation-based approach. The electromagnetic fields are discretized using finite-difference operators, and the resulting non-
unitary matrices are mapped to Bell-basis Trotter blocks, enabling efficient
circuit construction. We introduce a measurement procedure that retrieves not only field amplitudes, but also physical directions of the electric and
magnetic field values at select spatial points. Implementing this logic on
quantum hardware relies on relative-phase-based sign reconstruction. Numerical results obtained using IonQ QPU, show good agreement with analytical solutions of
benchmark problems in two dimensions and on simulators; in three dimensions. We further extend our approach to compute fields scattered from simple bodies, by enforcing appropriate boundary conditions. Our work lays the foundational steps towards realizing
quantum-hardware solutions for computational electromagnetics.
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All authors Gautam Sharma, Apurva Tiwari, Niladri Gomes, Jezer Jojo, J. Eric Bracken, Jay Pathak
Optics
Seeing full vectorial structures of light fields with a single-shot holographic multiplexed detector
Sitao Qin, Yize Liang, Shuai Cao et al. (+5 more)
The vectorial structure of light, amplitude, phase, and polarization, encodes essential information for applications ranging from super-resolution microscopy to high-capacity communications and
quantum information processing. However, existing characterization methods either rely on multiple sequential measurements or require bulky polarization splitting optics in the signal path. Here we propose and experimentally demonstrate a single shot
holographic multiplexed detector that retrieves the full vectorial information from a single intensity recording. Two orthogonally polarized reference beams with distinct off axis carriers interfere with the unknown vectorial light field, encoding both polarization channels into one off axis hologram. Digital
holographic reconstruction combined with a self calibrated global phase
retrieval recovers the complex wavefronts in the two channels without any additional measurements. We validate our approach by characterizing the polarization structures and concurrence of various vectorial structured light beams on a higher order Poincare sphere (l=2). This compact, efficient detector may open new routes for real time vectorial metrology in light matter interaction,
chiral sensing, vectorial adaptive optics, and dynamic structured light applications.
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All authors Sitao Qin, Yize Liang, Shuai Cao, Changqing Cao, Xukun Yin, Lixian Liu, Mingjian Cheng, Huailiang Xu