Materials Science
Unveiling the amorphous ice layer during premelting using AFM integrating machine learning
Binze Tang, Chon-Hei Lo, Tiancheng Liang et al. (+6 more)
Premelting plays a key role across physics, chemistry, materials and biology sciences but remains poorly understood at the atomic level due to surface characterization limitations. We report the discovery of a novel amorphous ice layer (AIL) preceding the quasi-
liquid layer (QLL) during ice premelting, enabled by a machine learning framework integrating atomic force microscopy (AFM) with molecular dynamics simulations. This approach overcomes AFM's depth and signal limitations, allowing for three-dimensional surface structure reconstruction from AFM images. It further enables structural exploration of premelting interfaces across a wide temperature range that are experimentally inaccessible. We identify the AIL, present between 121-180K, displaying disordered two-dimensional hydrogen-bond network with solid-like dynamics. Our findings refine the ice premelting phase diagram and offering new insights into the surface growth dynamic, dissolution and interfacial chemical reactivity. Methodologically, this work establishes a novel framework for AFM-based 3D structural discovery, marking a significant leap in our ability to probe complex disordered interfaces with unprecedented precision and paving the way for future disciplinary research, including surface reconstruction, crystallization, ion solvation, and biomolecular recognition.
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All authors Binze Tang, Chon-Hei Lo, Tiancheng Liang, Jiani Hong, Mian Qin, Yizhi Song, Duanyun Cao, Ying Jiang, Limei Xu
Materials Science
Many-Body Correlation Effects in Fröhlich Electron-Phonon Coupling
Zien Zhu, Chih-En Hsu, Benran Zhang et al. (+5 more)
In compound
semiconductors and
insulators, the polar electron-
phonon coupling diverges at long range, known as the Fröhlich interaction. Modern first-principles electron-
phonon calculations treat the Fröhlich interaction in a semiclassical electrostatic formalism based on density-functional perturbation theory. Here, using many-body $GW$ perturbation theory, we reveal important electron correlation effects in the Fröhlich-type electron-
phonon coupling, which are missed by the prevailing approaches and rooted in the fundamentally distinct behavior between quasiparticle self-energy and semi-local exchange-correlation functionals in the long-range limit. Going beyond the electrostatic treatment, we derive and implement the $GW$ self-energy contribution to the long-range polar electron-
phonon coupling, and demonstrate its critical role and nontrivial behaviors in properties such as electron linewidth and polaron formation in several prototype
semiconductors. Remarkably, calculations on photoemission kink in electron-doped TiO$_2$ achieve excellent agreement with experiment. Our work establishes the many-body generalization of the Fröhlich interaction that is essential for accurate electron-
phonon calculations at the full $GW$ level combined with Wannier interpolation techniques.
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All authors Zien Zhu, Chih-En Hsu, Benran Zhang, Zhenfa Zheng, Mauro Del Ben, Antonios M. Alvertis, Hung-Chung Hsueh, Zhenglu Li
Materials Science · Cross-listed from physics.chem-ph
A Software Package for Generating Robust and Accurate Potentials using the Moment Tensor Potential Framework
Josiah Roberts, Biswas Rijal, Simon Divilov et al. (+6 more)
We present the Plan for Robust and Accurate Potentials (PRAPs), a software package for training and using moment tensor potentials (MTPs) in concert with the Machine Learned Interatomic Potentials (MLIP) software package. PRAPs provides an automated workflow to train MTPs using active learning procedures, and a variety of utilities to ease and improve workflows when utilizing the MLIP software. PRAPs was originally developed in the context of
crystal structure prediction, in which one calculates convex hulls and predicts low energy metastable and thermodynamically stable structures, but the potentials PRAPs develops are not limited to such applications. PRAPs produces two potentials, one capable of rough estimates of the energies, forces and stresses of almost any chemical structure in the specified compositional space – the Robust Potential – and a second potential intended to provide more accurate descriptions of ground state and metastable structures – the Accurate Potential. We also present a Python library, mliputils, designed to assist users in working with the chemical structural files used by the MLIP package.
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All authors Josiah Roberts, Biswas Rijal, Simon Divilov, Jon-Paul Maria, William G. Fahrenholtz, Douglas E. Wolfe, Donald W. Brenner, Stefano Curtarolo, Eva Zurek
Materials Science
Rational Design Principles for Na- and Li-ion Carbon Anodes from Interlayer Spacing Control
Ihor Radchenko and Oleksandr I. Malyi
Graphite, the standard commercial anode for Li-ion batteries, is thermodynamically incompatible with Na-ion batteries, leading researchers to search for alternative C-based structures (e.g., hard carbon, expanded graphite). In a simplified picture, the main idea of such search relies on identifying disordered C structures with a large interlayer spacing and distribution of local structural motifs (e.g., pores) with target electrochemical properties. Such exploration is typically done via trial-and-error experimentation, which often does not allow precise understanding of the role of interlayer distance and even Na/Li-ion intercalation in the electrochemical performance. Motivated by this, using density-functional theory and cluster expansion, we establish a structure-property relationship for Li- and Na-intercalation across a range of graphite interlayer spacings and stacking arrangements. We show that Na intercalation becomes thermodynamically possible in large concentrations above 4.21 Å even without a change in interlayer spacing. Conversely, Li intercalation has a narrow optimal window, with maximum capacity (close to the commercial limit) at approximately 3.75 Å, while larger spacings (e.g., 4.58 Å) quickly reduce Li storage capacity. We also find that AA-stacked domains consistently offer stronger ion bonding and higher voltages than AB-stacked domains for both ions. Our results, thus, not only explain the role of metal ion intercalation in the electrochemical performance, but also clarify the fundamental design trade-offs for expanded C anodes, offering practical targets and interlayer distance ranges for the independent optimization of the next generation of negative electrodes for metal-ion batteries.
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Materials Science · Cross-listed from cond-mat.soft
Morphogenesis of bacterial colonies in liquid crystalline environments
Sebastian Gonzalez La Corte, Thomas G. J. Chandler, Saverio E. Spagnolie et al. (+2 more)
Natural bacterial habitats are often complex fluids with viscoelastic and anisotropic responses to stress; for example, they can take the form of
liquid crystals (LCs), with elongated microscopic constituents that collectively align while still retaining the ability to flow. However, laboratory studies typically focus on
cells in simple
liquids or complex fluids with randomly-oriented constituents. Here, we show how interactions with LCs shape bacterial proliferation in multicellular colonies. Using experiments, we find that in a nematic LC,
cells generically form aligned single-
cell-wide "chains" as they reproduce. As these chains lengthen, they eventually buckle in a highly localized manner. By combining our measurements with a continuum mechanical theory, we demonstrate that this distinctive morphogenetic program emerges because
cells are kept in
alignment due to the LC's elasticity; as each chain lengthens, growth-induced viscous stresses along its contour eventually overcome the elasticity of the surrounding nematic, leading to buckling. Our work thus reveals and provides mechanistic insight into the previously-overlooked role of LCs in sculpting bacterial life in complex environments.
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All authors Sebastian Gonzalez La Corte, Thomas G. J. Chandler, Saverio E. Spagnolie, Ned S. Wingreen, Sujit S. Datta
Materials Science
Shape descriptors of equilibrium states in a quantum lattice model with local multi-well potentials: A geometric analysis near the phase transitions in Sn$_2$P$_2$S$_6$ ferroelectric crystals
S. Özüm, T. Akkurt, R. Erdem et al. (+1 more)
We analyze the
equilibrium states of
quantum lattice model with local multi-well potentials for Sn$_2$P$_2$S$_6$ ferroelectric
crystals using the mean and Gaussian
curvatures ($H$, $K$), curvedness ($C$) and shape index ($S$). From the energy gap, pressure and temperature variations of $H$, $K$, $C$ and $S$, we have reported the
geometric construction of the free energy surfaces for the ferroelectric and paraelectric phases. Their behaviors are explicitly observed near the ferroelectric-paraelectric phase transitions. It is found that $H$, $C$ and $S$ display a cusp singularity at the criticality while $K$ converges to zero on both sides of the critical and tricritical points.
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All authors S. Özüm, T. Akkurt, R. Erdem, N. Güçlü
Materials Science
Active learning potentials for first-principles phase diagrams using replica-exchange nested sampling
Nico Unglert, Michael Ketter and Georg K. H. Madsen
Accurate prediction of materials phase diagrams from first principles remains a central challenge in computational materials science. Machine-learning interatomic potentials can provide near-DFT accuracy at a fraction of the cost, but their reliability crucially depends on the availability of representative training data that span all relevant regions of the potential-energy surface. Here, we present a fully automated active-learning (AL) strategy based on replica-exchange nested sampling (RENS) for the generation of training data and the computation of complete pressure-temperature phase diagrams. In our framework, RENS acts as both the exploration engine and the acquisition mechanism: its intrinsic diversity and likelihood-constrained sampling ensure that the configurations selected for DFT labeling are both informative and thermodynamically representative. We apply the approach to silicon, germanium, and titanium using potentials trained at the r2SCAN level of theory. For all systems, the AL process converges within 10-15 iterations, yielding transferable potentials that reproduce known phase transitions and thermodynamic trends. These results demonstrate that RENS-based AL provides a general and autonomous route to constructing machine-learning interatomic potentials and predicting first-principles phase diagrams across broad thermodynamic conditions.
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Materials Science
Diamond crystal with Y-defects: spectroscopy and transmission electron microscopy
A.A. Shiryaev, E.A. Vasilev, A.L. Vasilev et al. (+3 more)
The paper presents results of investigation of a natural Ib-IaA diamond containing Y-defects from Yubileinaya kimberlite pipe, Yakutia. Analysis of spatial distribution of nitrogen-related A and C centers and intensity of Infra-red absorption at Raman frequency (1332 cm-1) reveals anticorrelation between these defects. Transmission electron microscopy of a zone with abundant Y-defects shows presence of dislocations in various configurations and numerous clusters of point defects generated by non-conservative dislocation motion. Extended defects with shape resembling thin (1-3 nm) rhombic plates with the largest dimension up to 20 nm are observed. Analysis of contrast of these defects shows that they represent nanosized voids (vacancy clusters). It is suggested that the defects were formed by annihilation of dislocation dipoles with subsequent growth by consumption of vacancies produced by non-conservative motion of dislocations. Upon excitation by 787 nm
laser, numerous narrow photoluminescecne lines are observed between 800-900 nm; their intensity and position show pronounced spatial heterogeneity on scale of few microns. Qualitatively similar behaviour of photoluminescence was earlier noted for hydrogenated nanodiamonds. It is suggested that unusual behaviour of the luminescence lines may be explained by recombination processes at internal walls of the discovered nanovoids.
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All authors A.A. Shiryaev, E.A. Vasilev, A.L. Vasilev, V.V. Artemov, N.V. Gubanov, D.A. Zedgenizov
Materials Science · Cross-listed from cond-mat.str-el
Experimental benchmark of the quantum-classical crossover in a spin ladder
Hironori Yamaguchi, Itsuki Shimamura, Akira Matsuo et al. (+4 more)
We report a
spin-(1/2, 5/2) three-leg ladder realized in a radical-Mn
polymer, exhibiting an
antiferromagnetic transition and magnetization curves accurately described by classical mean-field theory. Although the underlying
spin model intrinsically supports strong
quantum fluctuations, as confirmed by
quantum Monte Carlo simulations, the real system shows an anomalously complete suppression of
quantum behavior. These findings provide a key experimental
benchmark for the
quantum-classical crossover and suggest that
lattice topology can play a crucial role in tuning the balance between
quantum and classical physics in strongly correlated systems.
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All authors Hironori Yamaguchi, Itsuki Shimamura, Akira Matsuo, Koichi Kindo, Koji Araki, Yoshiki Iwasaki, Masayuki Hagiwara
Materials Science
Anion correlation induced nonrelativistic spin splitting in rutile antiferromagnets
Siddhartha S. Nathan, Danilo Puggioni, Linding Yuan et al. (+1 more)
Many studies of non-relativistic
spin-splitting (NRSS), or altermagnetism, have focused on idealized, perfectly ordered
crystals, relying on
symmetry-based approaches to identify candidate materials. Here, we theoretically investigate how local short-range ordering (SRO) influences NRSS of energy bands in partially ordered collinear
antiferromagnetic iron oxyfluoride (FeOF). Using the cluster expansion method, we identify four nearly degenerate structures (energy difference $\leq 8$ meV per formula unit) that represent distinct snapshots of local plane-to-plane O/F correlations. Our density functional theory (DFT) results show robust NRSS along the $\Gamma$-M direction in all four structures, despite the absence of long-range order. The magnitude and character of the splitting depend sensitively on the specific direction of anion correlations, effects that are not fully captured in high-
symmetry average structures. Notably, two configurations ($Pmc2_1$ and $Pm$) exhibit $\Gamma$-point
spin splitting absent in ordered FeF$_2$ and a virtual
crystal approximation model of FeOF. We further predict distinct magneto-optical Kerr effect (MOKE) signatures, enabling experimental detection of SRO-driven electronic structure changes. These results highlight heteroanionic compounds as a promising design space for NRSS antiferromagnets, with experimentally synthesized FeOF already exhibiting a substantially higher Néel temperature (315\,K) than FeF$_2$ (79\,K).
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All authors Siddhartha S. Nathan, Danilo Puggioni, Linding Yuan, James M. Rondinelli
Materials Science
Random Combinatorial Libraries and Automated Nanoindentation for High-Throughput Structural Materials Discovery
Vivek Chawla, Dayakar Penumadu and Sergei Kalinin
Accelerating the discovery of structural materials is essential for applications in hard and refractory
alloys, hypersonic platforms,
nuclear systems, and other extreme environment technologies. Progress is often constrained by slow synthesis and characterization cycles and the need for extensive mechanical testing across large compositional spaces. Here, we propose a rapid screening strategy based on random material libraries, in which thousands of distinct compositions are embedded within a single specimen, mapped by EDS, and subsequently characterized. Using nanoindentation as a representative case, we show that such libraries enable dense composition property mapping while reducing the number of samples required to explore high dimensional composition spaces compared to traditional synthesis and test workflows. An experimentally calibrated Monte Carlo framework is developed to quantify practical limits, including particle size, EDS noise and resolution, positional accuracy, and nanoindenter motion costs. The simulations identify regimes where random libraries provide orders of magnitude acceleration over classical workflows. Finally, we demonstrate experimental
navigation of these libraries using automated indentation. Together, these results establish random libraries as a general route to high throughput characterization in structurally critical material systems.
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Materials Science
Epitaxial Recovery of beta-Ga2O3 after High Dose Implantation
Tianhai Luo, Katie R. Gann, Cameron A. Gorsak et al. (+3 more)
As an ultrawide bandgap
semiconductor, beta-Ga2O3 has been attractive for its strong tolerance to irradiation damage and high n-type conductivity through ion implantation. Homoepitaxial (010) e̱ta}-Ga2O3 films grown by MOCVD were implanted with Ge to study the post-implantation damage and
lattice recovery after thermal annealing. Box profiles of 100 or 50 nm at concentration of 5*10^19 or 3*10^19 cm^-3 were formed, with maximum displacement per atom (DPA) of 1.2 or 2.0.
Lattice recovery was investigated using X-ray diffraction (XRD) for anneals from 100 C to 1050 C. A gamma-phase related peak was observed for all implant conditions. All samples showed strain relaxation of beta-phase peak at temperature below 500 C, with no significant change for the gamma-phase related peak. For lower damage implants, films recovered fully to epitaxial beta-phase after sequential annealing to 900 C. For the higher damage implant, the gamma-phase associated peak annealed out with increasing temperature, but a new diffraction peak formed at slightly smaller
lattice spacing; full recovery of the
lattice was not observed until annealing at 1050 C. The newly formed diffraction peak is identified as beta-(20-4), beta-(512), or beta-(71-2), each potentially arising from the conversion of gamma-phase to beta-phase via a common oxygen sub-
lattice.
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All authors Tianhai Luo, Katie R. Gann, Cameron A. Gorsak, Hari P. Nair, R. B. van Dover, Michal O. Thompson
Materials Science
Simultaneous power generation and cooling using semiconductor-sensitized thermal cells
Atsushi Hayashida, Hitoshi Saito, Yang Chunxiang et al. (+5 more)
This manuscript reports a
semiconductor-sensitized thermal
cell (STC) that converts ambient heat into electrical power while simultaneously reducing its own temperature under isothermal conditions. Using a printable
semiconductor–electrolyte architecture, we fabricate $4\,\mathrm{cm} \times 4\,\mathrm{cm}$ devices that generate up to approximately $0.2\,\mathrm{mW}$ at temperatures of $40$–$55\,^\circ\mathrm{C}$. During continuous discharge, the STC exhibits a transient temperature decrease followed by thermal equilibration with the environment. In contrast, periodic on–off discharge produces sustained cooling of approximately $1\,^\circ\mathrm{C}$ relative to a non-discharging reference. Notably, parallel integration of four STCs yields a nonlinear enhancement of cooling (approximately $5\,^\circ\mathrm{C}$) without a corresponding increase in electrical output. The observed behavior can be understood within a macroscopic energy-balance framework, in which time modulation of electrochemical heat consumption prevents the establishment of thermal steady state. These results demonstrate sustained isothermal cooling induced by heat-to-electricity conversion at practical device scales, and highlight
semiconductor-sensitized thermal
cells as a platform for coupled energy harvesting and thermal management.
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All authors Atsushi Hayashida, Hitoshi Saito, Yang Chunxiang, Taiga Nishii, Motokazu Ishihara, Yuta Nakamura, Kento Sunaga, Sachiko Matsushita