Statistical Methodology
Estimation in moderately misspecified models
Nils Lid Hjort
Suppose data are fitted to some parametric model but that the true model happens to be one with an additional parameter. When a parameter is to be estimated one can use likelihood estimation in the wider model or in the narrow model. Including the extra parameter in the model means less bias but larger sampling variability. Two basic questions are addressed in this article. (i) Just how much misspecification can the narrow model tolerate? In the context of a large-sample moderate misspecification framework we find a surprisingly simple, sharp, and general answer. There is effectively a `tolerance radius' around a given narrow model, inside of which narrow estimation is more precise than wide estimation for all estimands. This is computed in a selection of examples that also demonstrate the degree of robustness of important standard methods against moderate incorrectness of the model under which they are optimal. (ii) Are there other
estimators that work well both under narrow and wide circumstances? We discuss several possibilities and propose some new procedures. All methods are compared in a broad large-sample performance study.
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Machine Learning (Statistics) · Cross-listed from q-bio.GN
A Large-Scale Comparative Analysis of Imputation Methods for Single-Cell RNA Sequencing Data
Yuichiro Iwashita, Ahtisham Fazeel Abbasi, Koichi Kise et al. (+2 more)
Background: Single-
cell RNA sequencing (scRNA-seq) enables gene expression profiling at cellular resolution but is inherently affected by sparsity caused by dropout events, where expressed genes are recorded as zeros due to technical limitations. These artifacts distort gene expression distributions and compromise downstream analyses. Numerous imputation methods have been proposed to recover latent transcriptional signals. These methods range from traditional statistical models to deep learning (DL)-based methods. However, their comparative performance remains unclear, as existing
benchmarks evaluate only a limited subset of methods,
datasets, and downstream analyses. Results: We present a comprehensive
benchmark of 15 scRNA-seq imputation methods spanning 7 methodological categories, including traditional and DL-based methods. Methods are evaluated across 30
datasets from 10 experimental protocols on 6 downstream analyses. Results show that traditional methods, such as model-based, smoothing-based, and low-rank
matrix-based methods, generally outperform DL-based methods, including
diffusion-based, GAN-based, GNN-based, and autoencoder-based methods. In addition, strong performance in numerical gene expression recovery does not necessarily translate into improved biological interpretability in downstream analyses, including
cell clustering, differential expression analysis, marker gene analysis, trajectory analysis, and
cell type annotation. Furthermore, method performance varies substantially across
datasets, protocols, and downstream analyses, with no single method consistently outperforming others. Conclusions: Our findings provide practical guidance for selecting imputation methods tailored to specific analytical objectives and underscore the importance of task-specific evaluation when assessing imputation performance in scRNA-seq data analysis.
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All authors Yuichiro Iwashita, Ahtisham Fazeel Abbasi, Koichi Kise, Andreas Dengel, Muhammad Nabeel Asim
Machine Learning (Statistics) · Cross-listed from cs.LG
Polynomial Speedup in Diffusion Models with the Multilevel Euler-Maruyama Method
Arthur Jacot
We introduce the Multilevel Euler-Maruyama (ML-EM) method compute solutions of SDEs and ODEs using a range of approximators $f^1,\dots,f^k$ to the drift $f$ with increasing accuracy and computational cost, only requiring a few evaluations of the most accurate $f^k$ and many evaluations of the less costly $f^1,\dots,f^{k-1}$. If the drift lies in the so-called Harder than Monte Carlo (HTMC) regime, i.e. it requires $\epsilon^{-\gamma}$ compute to be $\epsilon$-approximated for some $\gamma>2$, then ML-EM $\epsilon$-approximates the solution of the SDE with $\epsilon^{-\gamma}$ compute, improving over the traditional EM rate of $\epsilon^{-\gamma-1}$. In other terms it allows us to solve the SDE at the same cost as a single evaluation of the drift. In the context of
diffusion models, the different levels $f^{1},\dots,f^{k}$ are obtained by training UNets of increasing sizes, and ML-EM allows us to perform sampling with the equivalent of a single evaluation of the largest UNet. Our numerical experiments confirm our theory: we obtain up to fourfold speedups for image generation on the CelebA
dataset downscaled to 64x64, where we measure a $\gamma\approx2.5$. Given that this is a
polynomial speedup, we expect even stronger speedups in practical applications which involve orders of magnitude larger networks.
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Machine Learning (Statistics)
Trust Region Constrained Bayesian Optimization with Penalized Constraint Handling
Raju Chowdhury, Tanmay Sen and Biswabrata Pradhan
Constrained optimization in high-dimensional black-box settings is difficult due to expensive evaluations, the lack of gradient information, and complex feasibility regions. In this work, we propose a
Bayesian optimization method that combines a penalty formulation, a surrogate model, and a trust region strategy. The constrained problem is converted to an unconstrained form by penalizing constraint violations, which provides a unified modeling framework. A trust region restricts the search to a local region around the current best solution, which improves stability and efficiency in high dimensions. Within this region, we use the Expected Improvement acquisition function to select evaluation points by balancing improvement and uncertainty. The proposed Trust Region method integrates penalty-based constraint handling with local surrogate modeling. This combination enables efficient exploration of feasible regions while maintaining sample efficiency. We compare the proposed method with state-of-the-art methods on synthetic and real-world high-dimensional constrained optimization problems. The results show that the method identifies high-quality feasible solutions with fewer evaluations and maintains stable performance across different settings.
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Statistics Theory
Detection of local geometry in random graphs: information-theoretic and computational limits
Jinho Bok, Shuangping Li and Sophie H. Yu
We study the problem of detecting local geometry in random graphs. We introduce a model $\mathcal{G}(n, p, d, k)$, where a hidden community of average size $k$ has edges drawn as a random
geometric graph on $\mathbb{S}^{d-1}$, while all remaining edges follow the Erdős–Rényi model $\mathcal{G}(n, p)$. The random
geometric graph is generated by thresholding inner products of latent vectors on $\mathbb{S}^{d-1}$, with each edge having marginal probability equal to $p$. This implies that $\mathcal{G}(n, p, d, k)$ and $\mathcal{G}(n, p)$ are indistinguishable at the level of the marginals, and the signal lies entirely in the edge dependencies induced by the local geometry. We investigate both the information-theoretic and computational limits of detection. On the information-theoretic side, our upper bounds follow from three tests based on signed triangle counts: a global test, a scan test, and a constrained scan test; our lower bounds follow from two complementary methods: truncated second moment via Wishart–GOE comparison, and tensorization of KL divergence. These results together settle the detection threshold at $d = \widetilde{\Theta}(k^2 \vee k^6/n^3)$ for fixed $p$, and extend the state-of-the-art bounds from the full model (i.e., $k = n$) for vanishing $p$. On the computational side, we identify a computational–statistical gap and provide evidence via the low-degree
polynomial framework, as well as the suboptimality of signed cycle counts of length $\ell \geq 4$.
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Statistical Computation
Generalized and Scalable Deep Gaussian Process Emulation
Deyu Ming and Daniel Williamson
Gaussian process (GP) emulators have become essential tools for approximating complex simulators, significantly reducing computational demands in optimization, sensitivity analysis, and model calibration. While traditional GP emulators effectively model continuous and Gaussian-distributed simulator outputs with homogeneous variability, they typically struggle with discrete, heteroskedastic Gaussian, or non-Gaussian data, limiting their applicability to increasingly common
stochastic simulators. In this work, we introduce a scalable Generalized Deep Gaussian Process (GDGP) emulation framework designed to accommodate simulators with heteroskedastic Gaussian outputs and a wide range of non-Gaussian response distributions, including Poisson, negative binomial, and categorical distributions. The GDGP framework leverages the expressiveness of DGPs and extends them to latent GP structures, enabling it to capture the complex, non-stationary behavior inherent in many simulators while also modeling non-Gaussian simulator outputs. We make GDGP scalable by incorporating the Vecchia approximation for settings with a large number of input locations, while also developing efficient inference procedures for handling large numbers of replicates. In particular, we present methodological developments that further enhance the computation of the approach for heteroskedastic Gaussian responses. We demonstrate through a series of synthetic and empirical examples that these extensions deliver the practical application of GDGP emulators and a unified methodology capable of addressing diverse modeling challenges. The proposed GDGP framework is implemented in the open-source R package dgpsi.
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Statistics Theory
Reflected diffusion models adapt to low-dimensional data
Asbjørn Holk, Claudia Strauch and Lukas Trottner
While the mathematical foundations of score-based generative models are increasingly well understood for unconstrained Euclidean spaces, many practical applications involve data restricted to bounded domains. This paper provides a statistical analysis of reflected
diffusion models on the hypercube $[0,1]^D$ for target distributions supported on $d$-dimensional linear subspaces. A primary challenge in this setting is the absence of Gaussian transition kernels, which play a central role in standard theory in $\mathbb{R}^D$. By employing an easily implementable infinite series expansion of the transition densities, we develop analytic tools to bound the score function and its approximation by sparse ReLU networks. For target densities with Sobolev smoothness $\alpha$, we establish a convergence rate in the $1$-Wasserstein distance of order $n^{-\frac{\alpha+1-\delta}{2\alpha+d}}$ for arbitrarily small $\delta > 0$, demonstrating that the generative
algorithm fully adapts to the intrinsic dimension $d$. These results confirm that the presence of reflecting boundaries does not degrade the fundamental statistical efficiency of the
diffusion paradigm, matching the almost optimal rates known for unconstrained settings.
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Statistics Theory · Cross-listed from cs.LG
Uniform Laws of Large Numbers in Product Spaces
Ron Holzman, Shay Moran and Alexander Shlimovich
Uniform laws of large numbers form a cornerstone of Vapnik–Chervonenkis theory, where they are characterized by the finiteness of the VC dimension. In this work, we study uniform convergence phenomena in cartesian product spaces, under assumptions on the underlying distribution that are compatible with the product structure. Specifically, we assume that the distribution is absolutely continuous with respect to the product of its marginals, a condition that captures many natural settings, including product distributions, sparse mixtures of product distributions, distributions with low mutual information, and more. We show that, under this assumption, a uniform law of large numbers holds for a family of events if and only if the linear VC dimension of the family is finite. The linear VC dimension is defined as the maximum size of a shattered set that lies on an axis-parallel line, namely, a set of vectors that agree on all but at most one coordinate. This dimension is always at most the classical VC dimension, yet it can be arbitrarily smaller. For instance, the family of convex sets in $\mathbb{R}^d$ has linear VC dimension $2$, while its VC dimension is infinite already for $d\ge 2$. Our proofs rely on
estimator that departs substantially from the standard empirical mean
estimator and exhibits more intricate structure. We show that such deviations from the standard empirical mean
estimator are unavoidable in this setting. Throughout the paper, we propose several open questions, with a particular focus on quantitative sample complexity bounds.
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Statistics Applications
Leveraging Synthetic and Genetic Data to Improve Epidemic Forecasting
Dave Osthus, Alexander C. Murph, Emma E. Goldberg et al. (+4 more)
Forecasting infectious disease outbreaks is hard.
Forecasting emerging infectious diseases with limited historical data is even harder. In this paper, we investigate ways to improve emerging infectious disease
forecasting under operational constraints. Specifically, we explore two options likely to be available near the start of an emerging disease outbreak: synthetic data and genetic information. For this investigation, we conducted an experiment where we trained deep learning models on different combinations of real and synthetic data, both with and without genetic information, to explore how these models compare when
forecasting COVID-19 cases for US states. All models are developed with an eye towards
forecasting the next pandemic. We find that models trained with synthetic data have better forecast accuracy than models trained on real data alone, and models that use genetic variants have better forecast accuracy compared to those that do not. All models outperformed a baseline persistence model (a feat only accomplished by 7 out of 22 real-time COVID-19 cases
forecasting models as reported in [38]) and multiple models outperformed the COVIDHub-4_week_ensemble. This paper demonstrates the value of these underutilized sources of information and provides a blueprint for
forecasting future pandemics.
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All authors Dave Osthus, Alexander C. Murph, Emma E. Goldberg, Lauren J. Beesley, William M. Fischer, Nidhi K. Parikh, Lauren A. Castro
Statistical Methodology
Distributionally balanced sampling designs via tactical configurations
Anton Grafström and Wilmer Prentius
Distributionally balanced sampling designs are low-discrepancy probability designs obtained by minimizing the expected discrepancy between the auxiliary-variable distribution of a random sample and the target population distribution. Existing constructions rely on circular population sequences, which restrict the design space by forcing samples to be contiguous blocks of a sequence. We propose a new construction based on tactical configurations that removes this topological constraint. The resulting designs are fixed-size and have equal inclusion probabilities. We develop both a simple initialization valid for arbitrary population and sample sizes and a spatial initialization that yields a lower initial expected discrepancy, together with a simulated annealing
algorithm for optimization within this class. In simulations and empirical examples, the proposed method outperforms state-of-the-art alternatives in terms of distributional fit and balance.
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Machine Learning (Statistics)
Continuous-Time Learning of Probability Distributions: A Case Study in a Digital Trial of Young Children with Type 1 Diabetes
Antonio Álvarez-López and Marcos Matabuena
Understanding how biomarker distributions evolve over time is a central challenge in digital health and chronic disease monitoring. In diabetes, changes in the distribution of glucose measurements can reveal patterns of disease progression and treatment response that conventional summary measures miss. Motivated by a 26-week clinical trial comparing the closed-loop insulin delivery system t:slim X2 with standard therapy in children with type 1 diabetes, we propose a probabilistic framework to model the continuous-time
evolution of time-indexed distributions using continuous glucose monitoring data (CGM) collected every five minutes. We represent the glucose distribution as a Gaussian mixture, with time-varying mixture weights governed by a neural ODE. We estimate the model parameter using a distribution-matching criterion based on the maximum mean discrepancy. The resulting framework is interpretable, computationally efficient, and sensitive to subtle temporal distributional changes. Applied to CGM trial data, the method detects treatment-related improvements in glucose dynamics that are difficult to capture with traditional analytical approaches.
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Statistical Methodology
E-values as statistical evidence: A comparison to Bayes factors, likelihoods, and p-values
Ben Chugg, Aaditya Ramdas and Peter Grünwald
A recurring debate in the philosophy of statistics concerns what, exactly, should count as a measure of evidence for or against a given hypothesis. P-values, likelihood ratios, and Bayes factors all have their defenders. In this paper we add two additional candidates to this list: the e-value and its sequential analogue, the e-process. E-values enjoy several desirable properties as measures of evidence: they combine naturally across studies, handle composite hypotheses, provide long-run error rates, and admit a useful interpretation as the wealth accrued by a bettor in a game against the null distribution. E-processes additionally handle optional stopping and optional continuation. This work examines the extent to which e-values and e-processes satisfy the evidential desiderata of different statistical traditions, concluding that they combine attractive features of p-values, likelihood ratios, and Bayes factors, and merit serious consideration as interpretable and intuitive measures of statistical evidence.
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Machine Learning (Statistics)
Neural Network Models for Contextual Regression
Seksan Kiatsupaibul and Pakawan Chansiripas
We propose a neural network model for contextual regression in which the regression model depends on contextual features that determine the active submodel and an
algorithm to fit the model. The proposed simple contextual neural network (SCtxtNN) separates context identification from context-specific regression, resulting in a structured and interpretable architecture with fewer parameters than a fully connected feed-forward network. We show mathematically that the proposed architecture is sufficient to represent contextual linear regression models using only standard neural network components. Numerical experiments are provided to support the theoretical result, showing that the proposed model achieves lower excess mean squared error and more stable performance than feed-forward neural networks with comparable numbers of parameters, while larger networks improve accuracy only at the cost of increased complexity. The results suggest that incorporating contextual structure can improve model efficiency while preserving interpretability.
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Machine Learning (Statistics)
Gengyu Xue and Yi Yu
Privacy and algorithmic
fairness have become two central issues in modern machine learning. Although each has separately emerged as a rapidly growing research area, their joint effect remains comparatively under-explored. In this paper, we systematically study the joint impact of differential
privacy and
fairness on classification in a
federated setting, where data are distributed across multiple servers. Targeting demographic disparity constrained classification under
federated differential
privacy, we propose a two-step
algorithm, namely FDP-Fair. In the special case where there is only one server, we further propose a simple yet powerful
algorithm, namely CDP-Fair, serving as a computationally-lightweight alternative. Under mild structural assumptions, theoretical guarantees on
privacy,
fairness and excess risk control are established. In particular, we disentangle the source of the private
fairness-aware excess risk into a) intrinsic cost of classification, b) cost of private classification, c) non-private cost of
fairness and d) private cost of
fairness. Our theoretical findings are complemented by extensive numerical experiments on both synthetic and real
datasets, highlighting the practicality of our designed
algorithms.
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Machine Learning (Statistics) · Cross-listed from cs.LG
On the Use of Bagging for Local Intrinsic Dimensionality Estimation
Kristóf Péter, Ricardo J. G. B. Campello, James Bailey et al. (+1 more)
The theory of Local Intrinsic Dimensionality (LID) has become a valuable tool for characterizing local complexity within and across data
manifolds, supporting a range of data mining and machine learning tasks. Accurate LID estimation requires samples drawn from small neighborhoods around each query to avoid biases from nonlocal effects and potential
manifold mixing, yet limited data within such neighborhoods tends to cause high estimation variance. As a variance reduction strategy, we propose an ensemble approach that uses subbagging to preserve the local distribution of nearest neighbor (NN) distances. The main challenge is that the uniform reduction in total sample size within each subsample increases the proximity threshold for finding a fixed number k of NNs around the query. As a result, in the specific context of LID estimation, the sampling rate has an additional, complex interplay with the neighborhood size, where both combined determine the sample size as well as the locality and resolution considered for estimation. We analyze both theoretically and experimentally how the choice of the sampling rate and the k-NN size used for LID estimation, alongside the ensemble size, affects performance, enabling informed prior selection of these hyper-parameters depending on application-based preferences. Our results indicate that within broad and well-characterized regions of the hyper-parameters space, using a bagged
estimator will most often significantly reduce variance as well as the mean squared error when compared to the corresponding non-bagged baseline, with controllable impact on bias. We additionally propose and evaluate different ways of combining bagging with neighborhood smoothing for substantial further improvements on LID estimation performance.
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All authors Kristóf Péter, Ricardo J. G. B. Campello, James Bailey, Michael E. Houle
Statistics Theory
Notes on Forré's Notion of Conditional Independence and Causal Calculus for Continuous Variables
Leihao Chen
Recently, Forré (arXiv:2104.11547, 2021) introduced transitional conditional independence, a notion of conditional independence that provides a unified framework for both random and non-
stochastic variables. The original paper establishes a strong global Markov property connecting transitional conditional independencies with suitable graphical separation criteria for directed mixed graphs with input nodes (iDMGs), together with a version of causal calculus for iDMGs in a general measure-theoretic setting. These notes aim to further illustrate the motivations behind this framework and its connections to the literature, highlight certain subtlies in the general measure-theoretic causal calculus, and extend the "one-line" formulation of the ID
algorithm of Richardson et al. (Ann. Statist. 51(1):334–361, 2023) to the general measure-theoretic setting.
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Machine Learning (Statistics)
CGRL: Causal-Guided Representation Learning for Node-Level Out-of-Distribution Generalization
Bowen Lu, Lianqiang Yang, Teng Li et al. (+1 more)
Graph Neural Networks (GNNs) deliver strong performance on graph tasks, but their accuracy drops significantly under out-of-distribution (OOD) scenarios. Under distribution shifts, GNNs often fit environmental noise and spurious correlations instead of stable causal mechanisms, leading to weak OOD robustness and unstable predictive representations. Existing solutions based on environment invariance or causal
reasoning are insufficient for node classification, as they do not explicitly model the fine-grained latent geometry required by the task. We further observe a training instability named Info-Jitter, where the mutual information between predictive representations and ground-truth labels fluctuates throughout training. To address these issues, we construct a node-classification-specific causal graph derived from the task's
geometric objective. Using do-calculus to block non-causal paths caused by environmental noise, we derive a deconfounded interventional objective and a variational lower bound to disentangle representations into intra-class and inter-class components. We then propose Causal-Guided Representation Learning (CGRL), a framework with two core modules. First, a multi-branch re-weighted representation learning (RRL) module learns a causal modulation
matrix to amplify causal signals and suppress environmental noise during message passing. Second, an optimization strategy combining intra-class aggregation, inter-class separation, energy-based reconstruction and supervised prediction regularizes the latent space for robust node-level generalization. Experiments on multiple
benchmark datasets show that CGRL outperforms strong baselines across various distribution shifts and effectively mitigates the Info-Jitter phenomenon.
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All authors Bowen Lu, Lianqiang Yang, Teng Li, Kun Zhang
Statistical Methodology
Mortality Forecasting as a Flow Field in Tucker Decomposition Space
Samuel J. Clark
Mortality
forecasting methods in the Lee-Carter tradition extrapolate temporal components via time-series models, often producing forecasts that systematically underpredict life expectancy at long horizons. This bias is consequential for planning pension funding, healthcare capacity, and social security solvency. The dominant alternative - the
Bayesian double-logistic model underlying the UN World Population Prospects - forecasts scalar life expectancy and requires a separate model life table system to recover age-specific rates. We reframe
forecasting as integrating a flow field through the low-dimensional score space of a Tucker tensor decomposition of the Human Mortality Database. PCA reduction reveals that the mortality transition is essentially a one-dimensional flow: a scalar speed function advances the level, trajectory functions supply the structural scores, and the Tucker reconstruction produces complete sex-specific, single-year-of-age mortality schedules at each horizon. In leave-country-out cross-validation (9,507 test points, 50-year horizon), the flow-field achieves bias of +1.058 years - substantially smaller than Lee-Carter (-3.2), Hyndman-Ullah (-3.5), and pyBayesLife (+3.3) - because it navigates a score space parameterised by mortality level rather than extrapolating temporal trends into unobserved territory. On 1.66 million sex-age-specific test points, it achieves 2.7x lower error than our de novo Python reimplementation of the UN pipeline trained on the same data - with lower error at every age, every forecast horizon, and for both sexes.
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Statistical Methodology
Rethinking Individual Risk and Aggregation in Survival Analysis: A Latent Mechanism Framework
Xijia Liu
Survival analysis provides a well-established framework for modeling time-to-event data, with hazard and survival functions formally defined as population-level quantities. In applied work, however, these quantities are often interpreted as representing individual-level risk, despite the absence of a clear generative account linking individual risk mechanisms to observed survival data. This paper develops a latent hazard framework that makes this relationship explicit by modeling event times as arising from unobserved, individual-specific hazard mechanisms and viewing population-level survival quantities as aggregates over heterogeneous mechanisms. Within this framework, we show that individual hazard trajectories are not identifiable from survival data under partial information. More generally, the conditional distribution of latent hazard mechanisms given
covariates is structurally non-identifiable, even when population-level survival functions are fully known. This non-identifiability arises from the aggregation inherent in survival data and persists independently of model flexibility or estimation strategy. Finally, we show that classical survival models can be systematically reinterpreted according to how they handle this unresolved conditional mechanism distribution. This paper provides a unified framework for understanding heterogeneity, identifiability, and interpretation in survival analysis, and clarifies how population-level survival models should be interpreted when individual risk mechanisms are only partially observed, thereby establishing explicit information constraints for principled modeling and inference.
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Statistical Methodology
XT-REM: A Two-Component Model for Meta-Analysis of Extreme Event Proportions
Jovana Dedeić, Jelena Ivetić, Sr{\dj}an Milićević et al. (+2 more)
In this paper, we introduce a novel model for the meta-analysis of proportions that integrates the standard random-effects model (REM) with an extreme value theory (EVT)-based component. The proposed model, named XT-REM (Extreme-Tail Random Effects Model), extends the classical REM framework by explicitly accounting for extreme proportions through a partial
segmentation of the study set based on a predefined threshold. While the majority of proportions are modeled using REM, proportions exceeding the threshold are analyzed using the Generalized Pareto Distribution (GPD). This formulation enables a dual interpretation of meta-analytic results, providing both an aggregate estimate for the central bulk of studies and a separate characterization of tail behavior. The XT-REM framework accommodates heteroskedastic variance structures inherent to proportion data, while preserving identifiability and consistency. Using real-world data on immunotherapy-related adverse events, together with simulation studies calibrated to empirical settings, we demonstrate that XT-REM yields a comparable central estimate while enabling a more explicit assessment of tail behavior, including high-percentile extreme proportions. Compared with the classical REM, XT-REM achieves higher log-likelihood values and lower AIC, in the considered scenarios, indicating a better fit within this modeling framework. In summary, XT-REM offers a theoretically grounded and practically useful extension of random-effects meta-analysis, with potential relevance to clinical contexts in which extreme event rates carry important implications for risk assessment.
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All authors Jovana Dedeić, Jelena Ivetić, Sr{\dj}an Milićević, Katarina Vidojević, Marija Delić
Statistical Computation
Uncertainty Quantification of Spline Predictors on Compact Riemannian Manifolds
Charlie Sire and Mike Pereira
To predict smooth physical phenomena from observations, spline interpolation provides an interpretable framework by minimizing an energy functional associated with the
Laplacian operator. This work proposes a methodology to construct a spline predictor on a compact Riemannian
manifold, while quantifying the uncertainty inherent in the classical deterministic solution. Our approach leverages the equivalence between spline interpolation and universal kriging with a specific covariance kernel. By adopting a Gaussian random field framework, we generate
stochastic simulations that reflect prediction uncertainty. However, on compact
manifolds, the covariance kernel depends on the generally unknown spectrum of the Laplace-Beltrami operator. To address this, we introduce a finite element approximation based on a triangulation of the
manifold. This leads to the use of intrinsic Gaussian Markov Random Fields (GMRF) and allows for the incorporation of anisotropies through local modifications of the Riemannian metric. The method is validated using a temperature study on a sphere, where the operator's spectrum is known, and is further extended to a test case on a cylindrical surface.
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Statistical Methodology · Cross-listed from cs.LG
Identification of NMF by choosing maximum-volume basis vectors
Qianqian Qi, Zhongming Chen and Peter G. M. van der Heijden
In nonnegative
matrix factorization (NMF), minimum-volume-constrained NMF is a widely used framework for identifying the solution of NMF by making basis vectors as similar as possible. This typically induces sparsity in the coefficient
matrix, with each row containing zero entries. Consequently, minimum-volume-constrained NMF may fail for highly mixed data, where such sparsity does not hold. Moreover, the estimated basis vectors in minimum-volume-constrained NMF may be difficult to interpret as they may be mixtures of the ground truth basis vectors. To address these limitations, in this paper we propose a new NMF framework, called maximum-volume-constrained NMF, which makes the basis vectors as distinct as possible. We further establish an identifiability
theorem for maximum-volume-constrained NMF and provide an
algorithm to estimate it. Experimental results demonstrate the effectiveness of the proposed method.
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Statistics Applications · Cross-listed from q-fin.ST
Adapting Altman's bankruptcy prediction model to the compositional data methodology
Fatemeh Keivani, Germà Coenders and Geòrgia Escaramís
Using standard financial ratios as variables in statistical analyses has been related to several serious problems, such as extreme outliers, asymmetry, non-normality, and non-linearity. The compositional-data methodology has been successfully applied to solve these problems and has always yielded substantially different results when compared to standard financial ratios. An under-researched area is the use of financial log-ratios computed with the compositional-data methodology to predict bankruptcy or the related terms of business default, insolvency or failure. Another under-researched area is the use of machine learning methods in combination with compositional log-ratios. The present article adapts the classical Altman bankruptcy prediction model and some of its extensions to the compositional methodology with pairwise log-ratios and three common statistical and machine learning tools: logistic regression models, k-nearest neighbours, and random forests, and compares the results with standard financial ratios. Data from the sector in the Spanish economy with the largest number of bankrupt firms according to the first two digits of the NACE code (46XX "wholesale trade, except of motor vehicles and motorcycles") were obtained from the Iberian Balance sheet Analysis System. The sample size (31,131 firms, of which 97 were bankrupt) was divided into a training and a validation
dataset. The training
dataset was downsampled to one healthy firm to each bankrupt firm. No outliers were removed. Focusing on predictive performance, the results show that compositional methods are better than standard ratios in terms of sensitivity (recall), with mixed results regarding specificity, compositional random forests and compositional logistic regression behaving the best.
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Statistical Methodology
A Bayesian Dynamic Latent Space Model for Weighted Networks
Roberto Casarin, Matteo Iacopini and Antonio Peruzzi
A new dynamic latent space eigenmodel (LSM) is proposed for weighted temporal networks. The model accommodates integer-valued weights, excess of zeros, time-varying node positions (features), and time-varying network sparsity. The latent positions evolve according to a vector autoregressive process that accounts for lagged and contemporaneous dependence across nodes and features, a characteristic neglected in the LSM literature. A
Bayesian approach is used to address two of the primary sources of inference intractability in dynamic LSMs: latent feature estimation and the choice of latent space dimension. We employ an efficient auxiliary-mixture sampler that performs data augmentation and supports conditionally conjugate prior distributions. A point-process representation of the network weights and the finite-dimensional distribution of the latent processes are used to derive a multi-move sampler in which each feature trajectory is drawn in a single block, without recursions. This sampling strategy is new to the network literature and can significantly reduce computational time while improving chain mixing. To avoid trans-dimensional samplers, a Laplace approximation of the partial marginal likelihood is used to design a partially collapsed Gibbs sampler. Overall, our procedure is general, as it can be easily adapted to static and dynamic settings, as well as to other discrete or continuous weight distributions.
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Other Statistics
Tackling the 6/49 Lottery and Debunking Common Myths with Probabilistic Methods and Combinatorial Designs
Ralph Stömmer
At the end, the house always wins! This simple truth holds for all public games of chance. Nevertheless, since lotteries have existed, people have tried everything to give luck a helping hand. This article compares objective scientific approaches to tackle the 6/49 lottery: probabilistic methods and combinatorial designs. The mathematical models developed herein can be modified and applied to other lotteries. The newly constructed (49, 6, 5) covering design is introduced, which meets the Schönheim bound. For lottery designs and for covering designs, a
benchmark based on probabilistic methods is presented. It is demonstrated that common attempts to outwit the odds correspond to limitations of numbers to subsets, which disproportionately reduce the chances of winning.
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Statistics Theory
Penalized estimation of GEV parameters for extreme quantile regression
Lucien M. Vidagbandji, Alexandre Berred, Cyrille Bertelle et al. (+1 more)
Quantile regression (QR) relies on the estimation of conditional
quantiles and explores the relationships between independent and dependent variables. At high probability levels, classical QR methods face extrapolation difficulties due to the scarcity of data in the tail of the distribution. Another challenge arises when the number of predictors is large and the
quantile function exhibits a complex structure. In this work, we propose an estimation method designed to overcome these challenges. To enhance extrapolation in the tail of the conditional response distribution, we model block maxima using the generalized extreme value (GEV) distribution, where the parameters depend on
covariates. To address the second challenge, we adopt an approach based on generalized random forests (grf) to estimate these parameters. Specifically, we maximize a penalized likelihood, weighted by the weights obtained through the grf method. This penalization helps overcome the limitations of the maximum likelihood
estimator (MLE) in small samples, while preserving its optimality in large samples. The effectiveness of our method is validated through comparisons with other approaches in simulation studies and an application to U.S. wage data.
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All authors Lucien M. Vidagbandji, Alexandre Berred, Cyrille Bertelle, Laurent Amanton
Statistical Methodology
Scoring Rules with Normalized Upper Order Statistics for Tail Inference
Martin Bladt and Christoffer Øhlenschlæger
This paper proposes a scoring-rule-based method for ranking predictive distributions in the Fréchet domain that is able to distinguish between different tail indices. The approach is built on normalized order statistics and exploits proper scoring rules to compare tail limit distributions in a distributional framework, with direct relevance for insurance claim-severity tails. On the theoretical side, consistency and asymptotic normality for empirical tail scores based on normalized upper order statistics are obtained through residual estimation theory. Simulation results demonstrate that the scoring-rule-based approach is capable of discriminating between different tail behaviors in finite samples and that systematic scale variation has only a minor impact on stability. We further show that optimizing scoring rules yields consistent tail-index
estimators and that the classical Hill
estimator arises as a special case. The performance of the Energy Score tail-index
estimator is investigated and compared with the Hill
estimator across a range of tail indices. Lastly, we analyze an automobile claim-severity data set to demonstrate how scoring rules can be used to rank predictive models based on tail predictions in actuarial settings.
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Statistical Methodology
Aitchison Geometry on the Simplex for Uncertainty Quantification in Bayesian Hyperspectral Image Unmixing
Hector Blondel, Lucas Drumetz and Thierry Chonavel
Most
algorithms for hyperspectral image unmixing produce point estimates of fractional abundances of the materials to be separated. However, in the absence of reliable ground truth, the ability to perform abundance uncertainty quantification (UQ) should be an important feature of
algorithms, e.g. to evaluate how hard the unmixing problem is and how much the results should be trusted. The usual modeling assumptions in
Bayesian models for unmixing rely heavily on the Euclidean geometry of the simplex and typically disregard spatial information. In addition, to our knowledge, abundance UQ is close to nonexistent. In this paper, we propose to leverage Aitchinson geometry from the compositional data analysis literature to provide practitioners with alternative tools for modeling prior abundance distributions. In particular we show how to design simplex-valued Gaussian Process priors using this geometry. Then we link Aitchinson geometry to constrained sampling
algorithms in the literature, and propose UQ diagnostics that comply with the constraints on abundance vectors. We illustrate these concepts on real and simulated data.
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Statistical Methodology
Minimal Sufficient Representations for Self-interpretable Deep Neural Networks
Zhiyao Tan, Liu Li and Huazhen Lin
Deep neural networks (DNNs) achieve remarkable predictive performance but remain difficult to interpret, largely due to overparameterization that obscures the minimal structure required for interpretation. Here we introduce DeepIn, a self-interpretable neural network framework that adaptively identifies and learns the minimal representation necessary for preserving the full expressive capacity of standard DNNs. We show that DeepIn can correctly identify the minimal representation dimension, select relevant variables, and recover the minimal sufficient network architecture for prediction. The resulting
estimator achieves optimal non-asymptotic error rates that adapt to the learned minimal dimension, demonstrating that recovering minimal sufficient structure fundamentally improves generalization error. Building on these guarantees, we further develop hypothesis testing procedures for both selected variables and learned representations, bridging deep representation learning with formal statistical inference. Across biomedical and
vision benchmarks, DeepIn improves both predictive accuracy and interpretability, reducing error by up to 30% on real-world
datasets while automatically uncovering human-interpretable discriminative patterns. Our results suggest that interpretability and statistical rigor can be embedded directly into deep architectures without sacrificing performance.
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Statistical Methodology · Cross-listed from cs.LG
i-IF-Learn: Iterative Feature Selection and Unsupervised Learning for High-Dimensional Complex Data
Chen Ma, Wanjie Wang and Shuhao Fan
Unsupervised learning of high-dimensional data is challenging due to irrelevant or noisy features obscuring underlying structures. It's common that only a few features, called the influential features, meaningfully define the clusters. Recovering these influential features is helpful in data interpretation and clustering. We propose i-IF-Learn, an iterative unsupervised framework that jointly performs feature selection and clustering. Our core innovation is an adaptive feature selection statistic that effectively combines pseudo-label supervision with unsupervised signals, dynamically adjusting based on intermediate label reliability to mitigate error propagation common in iterative frameworks. Leveraging low-dimensional
embeddings (PCA or
Laplacian eigenmaps) followed by $k$-means, i-IF-Learn simultaneously outputs influential feature subset and clustering labels. Numerical experiments on gene microarray and single-
cell RNA-seq
datasets show that i-IF-Learn significantly surpasses classical and deep clustering baselines. Furthermore, using our selected influential features as preprocessing substantially enhances downstream deep models such as DeepCluster, UMAP, and VAE, highlighting the importance and effectiveness of targeted feature selection. Code is available at: [https://github.com/mc25800852/i_if_learn].
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