Computational Physics · Cross-listed from physics.plasm-ph
Characteristic Mapping Method for Vlasov-Poisson with BGK-collisions
Xi-Yuan Yin, Philipp Krah, Zetao Lin et al. (+2 more)
This work presents the first steps for simulating kinetic
plasmas with collisions using the characteristic mapping method (CMM). The CMM is a semi-Lagrangian method that explores a semi-group structure to store diffeomorphic flow maps efficiently. Using the semi-group structure, individual submaps can be composed to relate the flow backward in time to its initial food point. The novelty of the presented work is handling the source term by storing sub-integrals that correspond to the individual sub-maps and allow efficient integration. Furthermore, we use the Lagrangian structure to avoid implicit time integration in the hydrodynamic regime, which is known to be stiff. We
benchmark our method on the Boltzmann-BGK and Vlasov-Poisson-BGK equations and consider different test cases, the Sod shock tube problem and nonlinear Landau damping for different Knudsen numbers. We show third-order spatial and temporal convergence and illustrate the fine-scale zoom property of CMM for the bump-on-tail instability.
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All authors Xi-Yuan Yin, Philipp Krah, Zetao Lin, Jean-Christophe Nave, Kai Schneider
Computational Physics · Cross-listed from physics.flu-dyn
Improving Reduced-Order Rotating Detonation Engine Models with Data Assimilation and Machine Learning
Ashwin Suriyanarayanan and Romit Maulik
Rotating detonation engines (RDEs) exhibit strongly nonlinear, multiscale wave dynamics that set the observed thermal field. High-fidelity simulations (DNS/LES) resolve these structures but remain computationally prohibitive, while low-order models such as the one-dimensional Koch-Kutz model capture circumferential wave motion yet lack the expressivity for high-frequency content. We use continuous data assimilation (nudging) to synchronize the Koch-Kutz solver with processed high-fidelity temperature data, introducing the prediction-observation mismatch as a relaxation source in the conserved energy equation; where observations are temporally sparse, interpolation supplies a target at every source update. As the nudging strength increases, the reduced model is progressively drawn onto the high-fidelity trajectory, and the forcing recorded along it provides an explicit, state-dependent estimate of the correction the model requires. We then train a Jacobian-regularized closure a priori on this recorded source. With the observation term removed, the corrected model advances autonomously, remains bounded, and recovers the temperature spectrum and the marginal statistics of the conserved variables relative to the baseline.
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Computational Physics · Cross-listed from physics.chem-ph
Toward Predictive Hydride Bond Energetics with Neural-Network Wavefunctions
Aqsa Shaikh, Lubos Mitas, P. Ganesh et al. (+1 more)
Accurate prediction of transition-metal hydride (TM-H) bond dissociation energies (BDEs) remains challenging because of strong electron correlation, relativistic effects, and nuclear
quantum contributions. Here, we assess the performance of neural-network variational Monte Carlo (NN-VMC) based on the Psiformer ansatz for systems with increasing complexity (LiH, OH, TiH and NiH), and compare it against CCSDT(Q)/CBS as well as available theoretical and experimental data. Throughout this study, both NN-VMC and ab initio calculations employ a common ccECP
Hamiltonian to enable tractable and consistent comparisons. To reduce finite-training errors, we introduce complementary zero-variance and infinite-step extrapolation schemes. For LiH and OH systems, NN-VMC yields total energies that differ within sub-milli Hartree compared to CBS extrapolated ab initio results and the BDE differences remain under 2$\sigma$. In case of Ti and TiH, the variational NN-VMC energies at the end of training are already consistent with CCSD(T)/CBS, while post-training extrapolation systematically closes the gap towards the CCSDT(Q)/CBS results. In contrast, NiH provides a stringent test of wavefunction expressivity, where increasing the number of determinants in NN-wavefunction ansatz improves the recovered correlation energy. The comparison of NiH BDE reveals that, while the existing theoretical predictions cluster into distinct high and low BDE groups, the broad scatter in available experimental data prevents a definitive assessment of the most accurate theoretical approach. This work demonstrates that NN-VMC with ccECPs
Hamiltonian provides a competitive framework for quantitative prediction of main-group and early TM-H energetics, while identifying late TM-H as an important
benchmark for future developments in neural-network wavefunctions and electronic structure theory.
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All authors Aqsa Shaikh, Lubos Mitas, P. Ganesh, Jaron T. Krogel
Computational Physics · Cross-listed from physics.chem-ph
Exchange-Correlation Potentials and Energies from Inverse Generalized Kohn-Sham Calculations
Vishal Subramanian, Bikash Kanungo, Vaibhav Khanna et al. (+2 more)
The Kohn-Sham (KS) formulation of density functional theory (DFT) is a map from the many-electron problem to an effective single-electron problem that is governed by a local multiplicative potential. The generalized-Kohn-Sham (GKS) formalism extends it to permit any single-electron operator—nonlocal, local non-multiplicative, local multiplicative, or any combination of them. Doing so expands the scope and ease of modeling the exchange-correlation (XC) functional in DFT, which encodes the complicated many-electron interactions into a mean-field of the electron density. However, unlike KS theory, development of XC functionals in GKS theory has been hindered by the absence of corresponding exact XC potentials and energies. We present the exact XC potentials and energies for atoms and molecules by solving the inverse GKS problem, using highly accurate correlated ab initio densities. Our approach is validated across weakly and strongly correlated systems. We further examine a common, yet untested, assumption that KS and GKS correlation potentials and energies are similar, finding instead that they differ substantially in strongly correlated systems. Overall, this work offers a powerful tool to model next-generation of XC functionals within the GKS formalism of DFT.
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All authors Vishal Subramanian, Bikash Kanungo, Vaibhav Khanna, Paul M. Zimmerman, Vikram Gavini
Computational Physics · Cross-listed from cond-mat.mtrl-sci
How Accurately Can We Describe Spin Crossover?
Angel Albavera-Mata, Daniel Mejía-Rodríguez, Niranjan Govind et al. (+3 more)
The complicated physicochemical properties of metal complexes that exhibit thermal
spin crossover make it difficult for routine electronic structure calculations to yield an accurate transition temperature prediction, $T_{1/2}$. The difficulty lies in the intricate connection between the
spin-crossover energy, which is a molecular spectroscopic property, and $T_{1/2}$, a condensed phase property. Here we show how to obtain
spin-crossover energies systematically by reverse engineering of experimental $T_{1/2}$ data. The protocol is based upon fitting the range separation parameter, $\omega$, in the hybrid LC-$\omega$PBE density functional to reproduce the experimental $T_{1/2}$ values for a series of metal complexes. We provide insights into the sources of variations of at least $\pm 15$ kJ mol$^{-1}$ found from common exchange and correlation functionals by comparing their performance against our reference data. By analysis of the sensitivity of transition temperatures to $\pm 1$ % shifts in the range separation parameter, we determined a typical uncertainty of $\pm 50$ K for them, and a $\pm 2$ kJ mol$^{-1}$ uncertainty in the extracted
spin-crossover energies due to $\pm 1$ % variations of $T_{1/2}$. Lastly, we present results from the high-level, all-electron coupled cluster method for eight of the smaller molecules in the reference data set, and discuss the influence of the truncation of the excitation series upon the
spin state energies.
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All authors Angel Albavera-Mata, Daniel Mejía-Rodríguez, Niranjan Govind, Ajay Panyala, Richard G. Hennig, S.B. Trickey
Computational Physics · Cross-listed from cs.LG
Single-condition neural solvers encode transferable response spaces for parametric differential equations
Wenbo Cao and Weiwei Zhang
Operator learning for parametric partial differential equations (PDEs) typically builds global models over prescribed domains, requiring cross-condition data or costly physics-constrained training. Here we show that the output Jacobian of a neural solution model trained at one condition defines a reusable response space for cross-condition solution variations. We introduce Linearized Subspace Transfer (LST) to exploit this space and recover target solutions by minimizing the target PDE-system residual over response-space coordinates. Because any single response space has finite coverage, Active Transfer Modeling (ATM) uses post-transfer residuals as coverage indicators to selectively acquire response spaces from additional single-condition models. Across six systems, single-condition response spaces supported cross-condition transfer, with enrichment improving accuracy when added spaces expanded representation capacity. Relative to evaluated physics-informed operator baselines, ATM reduced error and offline construction cost, with orders-of-magnitude accuracy gains in representative cases and millisecond-to-second target adaptation. These results establish neural solvers as reusable local parametric models.
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Computational Physics · Cross-listed from cond-mat.mtrl-sci
Effect of Near-surface Thermal Spikes on Radiation Hardness of Gallium Oxide
Tomás Fernández Bouvier, Umutcan Bektas, Alexander Azarov et al. (+10 more)
Gallium oxide (Ga$_{2}$O$_{3}$) stands out as an extraordinary high radiation-tolerant
semiconductor, because its
lattice displacements induce polymorph transitions, holding material crystalline instead of leading to amorphization. Meanwhile, under extremely severe irradiation conditions many
crystals become amorphous, often starting from surfaces where the translation
symmetry breaks. Here, we show that the surface amorphization may prevail over the crystallisation in Ga$_{2}$O$_{3}$, however only if the mass and energy of irradiated ions produce sufficiently dense heat spikes in the immediate vicinity of the free surface. Applying machine-learned molecular dynamics simulations together with experimental broad-beam and focused ion-beam irradiations, we conclude that the presence of the free surface enables asymmetric displacements of Ga and O atoms, leading to a local non-stoichiometry. Consequently, when the affected cascade volume is sufficiently large, this compositional imbalance suppresses recrystallization and promotes amorphization. As such, our results are ready to use for tailoring irradiation conditions to either prevent or induce surface amorphization, depending on the requirements of the intended applications in Ga$_{2}$O$_{3}$ or other compound
semiconductors.
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All authors Tomás Fernández Bouvier, Umutcan Bektas, Alexander Azarov, Ru He, Nico Klingner, René Hübner, Paul Chekhonin, Aleksi Leino, Kai Nordlund, Javier García Fernández, Andrej Kuznetsov, Gregor Hlawacek, Flyura Djurabekova
Computational Physics · Cross-listed from cond-mat.stat-mech
Shannon Entropy as an Order Parameter for the Two-Dimensional Confined Coulomb Systems: Exact Balance Law, Topological Charge Sum Rule, and Boundary Saturation
Georgiy K. Lavrov and Eduard G. Nikonov
We establish a complete information-theoretic framework for the known minimum-energy configurations of the two-dimensional Thomson problem on a hard-wall disk, based on the Shannon
entropy of the Voronoi topological charge distribution. Two exact results are proven and hold for all studied systems of size $N=12$-$10^5$. First, an
entropy balance law decomposes the total
entropy into bulk, boundary, and mixing contributions without approximation. Second, a topological charge sum rule fixes the total charge at twice the number of boundary particles plus six; together with the observed separation of bulk and boundary coordination numbers, it yields exact relations between the populations of three- and four-coordinated boundary particles and the bulk charge. We further prove that the boundary
entropy is bounded by the binary maximum and that saturation of this bound is equivalent to the bulk charge per boundary particle approaching minus one half, a regime that the framework itself restricts to boundaries of at least twelve particles. All identities are verified numerically to machine precision, locating bulk nucleation at $56$ particles, the maximum of global disorder at $146$, and the onset of boundary saturation beyond about $1000$. The framework carries over to closed spherical geometry, where the total charge is fixed at twelve.
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Computational Physics
A Symmetry-Constrained Fourier–Morse Framework for Compact Anisotropic Interaction Potentials
Hadis Ghodrati, Sibylle Gemming, Florian Günther et al. (+1 more)
Large-scale coarse-grained simulations of anisotropic particles require compact interaction models that retain orientation-dependent energetics. We present a
symmetry-constrained
Fourier–Morse framework in which the radial interaction is described by a Morse potential and its orientational dependence by
Fourier expansions. The representation converges systematically with harmonic resolution, allows known orientational
symmetries to be imposed directly, and supports further reduction through harmonic truncation and coefficient
pruning. Its explicit
Fourier structure also provides a natural basis for constructing or modifying model interactions with prescribed orientational
symmetries. The parameterization requires only a sampled interaction landscape and is therefore independent of the method used to generate the reference data. We demonstrate the approach for four interaction classes of chiral $\alpha$-polyalanine helices, representing more than \num{300000} reference energy values with tens to a few hundred coefficients while reproducing
equilibrium interaction features with meV- and mÅ-level errors. As a proof of concept, molecular-dynamics simulations using the reduced analytical potentials produce stable low-temperature configurations exhibiting local ordering motifs qualitatively consistent with those identified previously by Monte Carlo simulated annealing.
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All authors Hadis Ghodrati, Sibylle Gemming, Florian Günther, Jeffrey Kelling
Computational Physics · Cross-listed from cs.CE
A Non-intrusive Approach for the Imposition of Strong Dirichlet Boundary Conditions in Unfitted Boundary Meshes
J.I. Camarotti, R. Aristio, R. Rossi et al. (+2 more)
The enforcement of essential boundary conditions is a fundamental challenge in unfitted boundary methods. This paper presents a non-intrusive, black-box strategy for imposing such conditions in unfitted meshes. The approach is intended for situations where the user does not have access to the solver's source code or its mathematical formulation, which is often the case when using commercial software. The proposed
algorithm allows solvers originally designed for body-fitted meshes to be used in unfitted cases, provided that four conditions are satisfied: (i) the solver must support user customization by means of scripting, (ii) allow the imposition of Dirichlet boundary conditions at the node level through scripting, (iii) permit the deactivation of elements outside the physical domain, and (iv) provide access to the solution gradient within active elements. The last condition can also be satisfied by externally reconstructing the gradient from nodal values and connectivity information, provided the element formulation is known, making it optional in practice. These requirements are very fair demands and are satisfied by the vast majority of production-ready, possibly commercial, codes. In the current work, we show the application of this non-intrusive
algorithm in the context of the Finite Element Method (FEM) and Isogeometric Analysis (IGA) discretizations, demonstrating optimal $L^2$-norm error convergence. This is demonstrated using the Kratos Multiphysics code (release v10.1) from the user API, simply leveraging the capabilities mentioned above.
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All authors J.I. Camarotti, R. Aristio, R. Rossi, R. Zorrilla, R. Wüchner
Computational Physics · Cross-listed from cs.CE
Partitioned Co-Simulation for CAD-integrated Vibroacoustic Problems in Unbounded Domains
J. I. Camarotti, P. Le, Y. Cai et al. (+4 more)
Vibroacoustic analysis often requires coupling structural and acoustic solvers based on different numerical formulations and discretizations, making monolithic implementations intrusive and limiting software modularity and reuse. This work presents a partitioned co-simulation framework for exterior vibroacoustic analysis that couples an Isogeometric boundary representation analysis (IBRA) structural solver with an isogeometric boundary element method (IGA-BEM) acoustic solver. The methodology operates directly on the computer-aided design (CAD) boundary representation, preserving the exact geometry throughout the analysis and supporting both weak and strong coupling between non-conforming discretizations. A key contribution is the extension of the Aitken dynamic relaxation and Interface Quasi-Newton with Inverse Least-Squares (IQN-ILS) convergence accelerators to complex-valued interface quantities, allowing the coupling iterations to account directly for both amplitude and phase information. The approach is validated using one-way and two-way coupled vibroacoustic
benchmark problems involving thin-shell structures and exterior acoustic domains. The results show excellent agreement with monolithic reference solutions, while the proposed complex-valued convergence accelerators improve the robustness and convergence behavior of the strongly coupled solution procedure without compromising solution accuracy. These results demonstrate that the proposed approach provides an accurate, robust, and modular approach for CAD-integrated frequency-domain vibroacoustic analysis.
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All authors J. I. Camarotti, P. Le, Y. Cai, R. Aristio, D. Panagiotopoulos, R. Wüchner, E. Deckers
Computational Physics · Cross-listed from cond-mat.mes-hall
Unified contact-free formulation of linear-response transport theory
Ziqian Wang and Ji Feng
Thermal Hall transport is conventionally formulated as a current–current Kubo response supplemented by an energy-magnetization correction obtained through an auxiliary pseudogravitational
magnetic field. Motivated by this structure, we develop a unified contact-free moment formulation of linear response to scalar sources. For channels whose source contributions vanish in the dc limit, the transport coefficient is the low-frequency residue of a retarded moment–moment correlator, with equal-time endpoint contributions incorporated before the dc limit is taken. The formulation uses only scalar sources, requires no separate magnetization subtraction, is independent of the local-current gauge, and is invariant under admissible redistributions of bond or interaction energy. It organizes particle, grand-energy, and specified
spin-density channels within a common source–moment response
matrix. Quadratic Landau–Lifshitz
spin waves illustrate the method: the secular growth of polarization-moment correlations isolates the finite Hall residue and yields the
magnon thermal Hall and
spin Nernst coefficients from the same paraunitary band geometry. The formulation provides a unified operator framework that simplifies the organization of particle, thermal, and
spin transport and can streamline calculations by eliminating separate contact and magnetization corrections.
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Computational Physics
Agentic Porting, Construction and Initial Verification and Validation of Libraries within the Open Source Unified TRAnsient Multi-Physics Advanced Reactor simulation Kit (Outram Park) Part II: Nuclear Data and Neutronics
Theodore Kay Chen Ong and SiCong Xiao
An agentic Rust port of both Njoy and OpenMC components was attempted to produce a convenient ENDF to Monte Carlo simulation pipeline in Outram Park. The code is still a prototype with more extensive verification and validation studies required in future studies. For initial verification work, Doppler-broadened cross sections of U-238 are demonstrated in this paper and compared to OpenMC pre-generated HDF5 files. Additionally, initial testing of the Monte Carlo ports from OpenMC were also performed with ICSBEP
benchmarks and a FHR Pebble with TRISO Fuel used in the author's PhD dissertation. The addition of nuclear data and Monte Carlo case studies shifts the focus of Outram Park from a Multi-Phase simulation kit to a Multi-Physics simulation kit.
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Computational Physics
Digital Twin of an Argon-Hydrogen Plasma Reactor
B. Artola, A. Bonfanti, M. Holmström et al. (+1 more)
The principal proof of concept revolves around an argon-hydrogen
plasma reactor that melts, reduces, atomizes and quenches critical raw material in one step, with premium spherical powder as the deliverable output and control of the composition chemistry. Each usage of the reactor is monitored through thermocouples and pressure sensors, which provide a daily data source of the real-world experiments. The reactor is modeled through COMSOL Multiphysics, which represents the core solver used to provide multiphysics simulations. The usage of COMSOL is complemented with Artificial Intelligence (AI) models, to enable seamless data assimilation and optimization. This paper presents the COMSOL twin of the reaction chamber and converging-diverging nozzle, together with a custom phase-change particle-tracing layer validated on Ti-6Al-4V (Ti64). Moreover, we highlight how the synergy between COMSOL simulations and AI-based digital surrogates can be leveraged to build self-consistent optimization loops geared toward (i) fully autonomous live control of the reactor and (ii) optimization of the process.
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All authors B. Artola, A. Bonfanti, M. Holmström, Q. M. Wargnier
Computational Physics · Cross-listed from cond-mat.mtrl-sci
Scalable construction of force-constant basis sets for large-scale anharmonic lattice-dynamical calculations
Atsuto Seko and Atsushi Togo
A projector-based formulation of force constants in crystalline materials provides a systematic framework for constructing force-constant bases and determining force constants from force–displacement
datasets while rigorously satisfying
crystal symmetry, permutation
symmetry, and translational invariance. In this work, we develop an efficient
eigenvalue solver for projection
matrices and integrate it into the projector-based framework. The proposed method substantially reduces the computational cost and enables practical calculations for large-scale systems, low-
symmetry crystals, and higher-order force constants that are difficult to treat using conventional approaches. Applications to self-consistent
phonon calculations for assessing the grain-boundary excess free energy,
lattice thermal conductivity calculations in complex compounds, and fourth-order force-constant estimations demonstrate the efficiency and robustness of the proposed framework for large and complex materials systems.
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Computational Physics · Cross-listed from physics.plasm-ph
Phasor-particle-in-cell algorithm for bidirectional external-circuit coupling of inductively coupled plasma
Zhaoyu Chen, Zili Chen, Jingwen Xu et al. (+4 more)
We develop a self-consistent phasor-particle-in-
cell algorithm to capture bidirectional inductive and capacitive feedback between an inductively coupled
plasma and a distributed
radio-frequency coil
circuit. The method couples a two-dimensional axisymmetric particle-in-
cell model with Monte Carlo collisions to a network that resolves the current and potential of each coil turn. Precomputed unit-current Helmholtz solutions provide the
vacuum impedance
matrix, while projection of the
plasma-only field supplies the series back electromotive force. An established charge-based electrostatic coupling is extended to individual turns: surface charges obtained from a discrete Gauss law consistent with the Poisson solver yield shunt displacement currents through their fundamental harmonics. Both responses are accumulated over a complete
radio-frequency period to update the relaxed
circuit state once per period.
Vacuum tests showed differences of -1.58 percent in single-solenoid inductance and -4.38 percent in mutual inductance relative to analytical references. A particle-free five-node manufactured
benchmark with both coupling channels active yielded a scaled complex-state error of 1.90 x 10^-5 against the continuous reference and approximately second-order spatial convergence. Application to an unshielded argon reference
cell reached statistically stationary states at coil-port powers of 60 and 100 W. Net capacitive heating accounted for 29.35 percent and 20.07 percent, respectively, of the combined inductive and capacitive
plasma power. Independently accumulated field-side and
circuit-side powers, including conductor loss, agreed within approximately 0.5 percent. These results support turn-resolved bidirectional field-
circuit coupling for axisymmetric
plasma simulations using a fundamental-frequency
circuit representation.
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All authors Zhaoyu Chen, Zili Chen, Jingwen Xu, Yonghua Ding, Wei Jiang, Donghui Xia, Ya Zhang