Statistical Methodology · Cross-listed from cs.LG
Three Ways Classical Test Theory Can Mislead About LLM Judges
Louis Yiven Zhu
Evaluations that use a large
language model (LLM) as a judge have begun to borrow reliability statistics from classical test theory and its extensions. We examine three such statistics that need one administration and no gold labels. None of them can isolate the judge, because one judge under one
prompt supplies no variance component of its own. Claude Haiku 4.5 judged 210 constructed short answers against ten-element checklists. On the 180 with parsed verdicts, the Kuder-Richardson coefficient (KR-20) came out at 0.5223 on the judge's verdicts and 0.5231 on error-free gold verdicts. In simulation, bank design alone moves KR-20 from 0.01 to 0.68 at the judge's measured 4.72% error rate. The dependability index $\Phi(\lambda)$, a ratio of mean squared distances from the pass mark, sits 0.22 to 0.38 below the judge's accuracy against gold and returns 0.54 to 0.68 on error-free gold verdicts. Livingston-Lewis accuracy treats the rubric elements as a sample, and at a pass mark of five elements it credits error-free gold scores with 0.78, close to the judge's 0.81. A statement about the judge therefore needs gold labels or a varied scorer facet, and a reliability ratio needs the bank's spread beside it. One of the four closest judge-evaluation papers varies the
prompt and still reads a reliability below 0.7 as a sign that a model cannot serve as a judge, although that reliability moves with the spread of the samples scored. We derive a decision table and four reporting lines from these two rules.
Read the full abstract ▾
Statistical Methodology
A normal-inverse-Wishart (NIW) Bayesian synthesizer for multivariate normal data with application to polygenic risk scores
Rasmus Rask Kragh Jørgensen, Anne Krogh Nøhr, Jan Reiter Sørensen et al. (+2 more)
Bayesian synthesis, which generates synthetic data by sampling from the posterior predictive distribution, is a popular approach for privatizing sensitive personal data. However, how attribute disclosure risk is affected by feature dimensionality, the number of individuals in the original
dataset, and the amount of released synthetic information remains poorly understood. We propose a mathematically tractable
Bayesian synthesizer for multivariate normal data based on a conjugate normal-inverse-Wishart prior for the mean vector and covariance
matrix. The conjugate structure yields closed-form posteriors and enables direct investigation of an adversary's ability to infer records under different data and release settings. We then demonstrate several intuitive properties of synthetic data generation through several simulations. Specifically, we show that disclosure risk decreases with the size of the original
dataset, but increases with the dimensionality of the feature space and the amount of synthetic information released, whether through the release of larger synthetic
datasets or multiple generator realizations. Finally, the proposed synthesizer was used to generate synthetic versions of a polygenic risk score
dataset, with the synthetic data exhibiting distributional properties comparable to those of the original data.
Read the full abstract ▾
All authors Rasmus Rask Kragh Jørgensen, Anne Krogh Nøhr, Jan Reiter Sørensen, Martin Bøgsted, Heidi Søgaard Christensen
Statistical Methodology
Genetic association testing with multivariate survival phenotypes under interval censoring
Juhee Lee, Kun Xia, Jianrui Zhang et al. (+3 more)
Set-based genetic association tests provide a powerful framework for detecting genetic effects on complex traits by jointly analyzing multiple genetic variants. Although set-based methods have been developed for interval-censored survival outcomes, existing approaches primarily focus on a single survival phenotype and therefore do not fully use information from multiple correlated outcomes. In this paper, we develop two Weighted V Tests for Multivariate Interval-Censored Data (WV-M-IC), extending the weighted V-statistic framework (Wu et al., 2021) to the joint analysis of multiple correlated interval-censored survival outcomes. The performance of these methods is evaluated through simulation studies, showing that the proposed approaches can provide power gains compared with single-outcome analyses. We apply the proposed methods to the ZOE 2.0 study to investigate dental caries progression in children.
Read the full abstract ▾
All authors Juhee Lee, Kun Xia, Jianrui Zhang, Gongjun Xu, Qing Lu, Chenxi Li
Statistical Computation
Non-Uniform Random Scans in Gibbs Sampling and CAVI
Sam Power
Gibbs sampling and coordinate ascent variational inference (CAVI) are two basic coordinate-wise methods for statistical computation. Recent analyses under strong log-concavity establish convergence rates for versions of these
algorithms that update one uniformly selected block at each step. We extend both results to arbitrary fixed, strictly positive selection probabilities. The rates are governed by a selection-adapted convexity constant $\lambda^{\star}_{\theta}$, defined using the block-smoothness constants and the selection probabilities $\theta$. The same constant yields a contraction of relative
entropy for the Gibbs sampler and a contraction of the mean-field objective gap for random-scan CAVI. The new bounds recover the uniform-scan results, and are never weaker than the naive comparison based on the smallest selection probability. They provide a principled way to adapt the scan to heterogeneous block geometry using
curvature information.
Read the full abstract ▾
Machine Learning (Statistics)
A convolutional framework for detecting event-driven dynamics in energy price series
Caixia Xu and Piotr Fryzlewicz
This paper develops a general convolutional neural network (CNN) framework for detecting heterogeneous event-driven dynamics in univariate time series windows. We show that the induced CNN class exactly represents classifiers based on range, maximum drawup, maximum drawdown and slope change, and uniformly approximates realised
volatility and autoregressive explosiveness on compact domains. We further establish error bounds for representative rules in finite samples and an oracle inequality for learning across them. Simulations show that the proposed model can match or outperform classifiers based on individual statistics as the training sample grows. In an application to six daily energy price series, a hierarchical CNN distinguishes event windows and event families. Applied without retraining to observations withheld after 20 February 2026, the fitted model identifies predominantly geopolitical dynamics in several oil and refined product series around the outbreak of the 2026 Iran war, while distinguishing a contemporaneous natural gas spike associated with weather.
Read the full abstract ▾
Statistical Methodology
Generalized Bayesian Clustering with Regression for Unaligned Longitudinal Binary Data
Khai Nguyen, Elizabeth Juarez-Colunga and Peter Mueller
We propose a generalized
Bayesian clustering with regression model for unaligned longitudinal binary outcomes, motivated by seizure diary data from the Human Epilepsy Project. Seizure diaries are sparse, irregularly observed, and vary enormously across patients. A single fully-specified generative model tends to be either misspecified or computationally inefficient. We address the challenge by two strategies. We set up a regression by way of clustering as model-based clustering using a mixture model. For the latter, we take a generalized
Bayesian perspective which replaces the full likelihood with a loss-based update using a generalized likelihood. We combine a trajectory similarity loss and a regression loss, so that clustering is informed by both trajectory similarity and the prediction of outcomes The trajectory similarity loss is constructed by representing each trajectory as an (empirical) distribution of subsequences, called reads, and then is defined based on the sliced Wasserstein distance between these empirical distributions. This loss allows
alignment-free comparison of sequences that are irregularly observed or temporally misaligned, and it scales quasi-linearly in trajectory length. The regression loss is the negative log-likelihood of a probit regression. A prior on the cluster-specific parameters is defined by way of a Dirichlet process prior on the mixing measure.
Read the full abstract ▾
Statistical Methodology
Parameterising Gaussian Graphical Models
Jack Storror Carter
Gaussian graphical models (GGMs) describe the dependence structure among jointly Gaussian random variables. However, the most common parameterisation of GGMs, the precision
matrix, describes both the dependence and scale of the variables. This has been shown to lead to model selection methods that depend on the scale of the variables, despite graphical models being scale invariant. Even after standardising data to have unit sample variances, entries of the precision
matrix can be on different scales leading to poor model selection. This paper decomposes the precision
matrix into marginal variances and interpretable scale-invariant parameters - the partial correlations and variance inflation factors. This decomposition gives new insights into the precision
matrix entries and the dynamics of model selection methods such as penalised likelihoods. In particular, it explains the observed phenomenon that penalties on the precision
matrix perform poorly at selecting hub variables and motivates the necessity of data standardisation. It also shows why methods based on partial correlations have better hub detection properties. The effect of penalisation of different quantities on the estimation of marginal variances is then investigated and an interesting simplification of the log-likelihood is shown when using maximum likelihood estimation of the marginal variances.
Read the full abstract ▾
Machine Learning (Statistics)
Exact Global MCMC with Denoising Diffusion
Mitch Hill
This work shows that
diffusion models learned with standard denoising loss can provide effective global MCMC proposals for complex high-dimensional target densities. The method is motivated by the observation that sequentially applying a forward and reverse
diffusion process defines a Markov chain with a target stationary distribution for an ideal denoiser trained on samples of the target distribution. This observation can be made exact for any denoiser by applying a Metropolis-Hastings step whose acceptance ratio includes the density of the forward and reverse paths of a discrete time SDE approximation. We therefore propose to train denoising
diffusion models on locally convergent MALA samples to learn global MCMC proposals. We call the composition of the global denoiser-based path sampler and a local MALA sampler Denoising
Diffusion Monte Carlo (DDMC). Experiments show that DDMC can provide global proposals with high acceptance across a variety of complex target densities. Our results offer preliminary evidence that the established scaling behavior of standard
diffusion training transfers directly to exact sampling from high-dimensional unnormalized densities.
Read the full abstract ▾
Machine Learning (Statistics)
Provably Efficient Federated Reinforcement Learning with Linear Function Approximation and Logarithmic Communication Cost
Zihang Liang, Haochen Zhang and Lingzhou Xue
We study
federated online reinforcement learning with linear function approximation. While recent multi-
agent reinforcement learning
algorithms achieve strong regret guarantees, they typically require sharing raw trajectories. This reliance incurs a communication cost that scales linearly with the number of episodes and violates the
privacy constraints of
federated settings. To address these limitations, we propose Fed-LSVI, the first provably efficient
federated algorithm for online reinforcement learning with linear function approximation in episodic Markov decision processes. By integrating a determinant-based event-triggered synchronization with a stepwise backward update mechanism, Fed-LSVI enables
agents to collaboratively learn an optimal policy by exchanging only compressed sufficient statistics. We prove that Fed-LSVI achieves a regret bound of $\widetilde{\mathcal O}(\sqrt{Md^3H^4T})$, where $d$ is the feature dimension, $H$ is the horizon length, $M$ is the number of
agents, and $T$ is the number of episodes per
agent, matching the best-known regret for multi-
agent online reinforcement learning with linear function approximation. Moreover, by following the stringent communication and
privacy constraints of the
federated setting, Fed-LSVI reduces the communication cost to only logarithmic dependence on $T$, representing a significant improvement over prior methods.
Read the full abstract ▾
Statistics Applications · Cross-listed from physics.ao-ph
How well is surface ocean carbon represented in observations and ocean models?
Viviana Acquaviva, Romina Wild, Alessandro Laio et al. (+3 more)
We introduce a general framework for quantifying the information content and representation quality of complex geophysical
datasets based on the intrinsic dimension and differentiable information imbalance of data
manifolds. We use it to derive and compare optimal representations of surface ocean carbon in the SOCAT database of observations and in global ocean biogeochemistry models (GOBMs) and to assess the robustness of the information we can extract from existing data. We find that within the most widely used feature set, the complexity of the data space of SOCAT observations is not fully captured by GOBMs, but the ranking and relative importance of variables learned through GOBMs are substantially correct. We observe that the learned representation of ocean carbon is less accurate in some regions, including the Southern Ocean, but doesn't appear to have evolved significantly over the last two decades. Finally, we show how the optimal representations can be used to improve the skill of distance-based machine learning models and demonstrate it for ocean carbon, and we propose two new metrics to compare models and observations that can be used to build more accurate weighted ensembles of estimates.
Read the full abstract ▾
All authors Viviana Acquaviva, Romina Wild, Alessandro Laio, Amanda R. Fay, Thea H. Heimdal, Galen A. McKinley
Statistical Methodology · Cross-listed from cs.AI
Different representation learning objectives recover distinct latent structures from the same psychometric data
Cong Cao, Tassos C. Kyriakides and Pambos Vrasidas
Psychometric questionnaires contain rich item-level information, yet it remains unclear whether different representation learning objectives recover the same latent organization. We investigated this question using 757 matched teacher-child pairs from the baseline assessment of the Cyprus ProW preschool trial. Behavioral structure was characterized from child SDQ, ASBI, and CBRS item responses using principal component analysis and clustering, yielding four behavioral phenotypes. A contrastive objective substantially improved teacher-child
retrieval relative to PCA-based representations, increasing Top-1 accuracy from 0.13% to 7.27% and Top-10 accuracy from 1.98% to 56.14%. However, contrastive representations preserved behavioral phenotype structure less effectively than PCA-based representations. A multi-task objective jointly optimizing
alignment and behavioral prediction partially restored behavioral organization but reduced
retrieval performance. These findings indicate that teacher-child correspondence and behavioral phenotypes represent distinct forms of latent organization and demonstrate that the latent structure recovered from linked psychometric data depends on the representation learning objective.
Read the full abstract ▾
Machine Learning (Statistics) · Cross-listed from cs.LG
Stochastic complexity of vectors containing cluster structure
Daniel Nicorici, Olli Yli-Harja and Jaakko Astola
This paper studies the problem of computing the
stochastic probability (shortest code length) of the encoded vectors containing cluster structure using Normalized Maximum Likelihood (NML) model. This is of great theoretical and practical importance in data clustering based on Minimum Description Length (MDL) principle, such as for estimating the best number of clusters and best cluster structure for the data. Straightforward computation of the shortest code length of the vector containing cluster structure based on the NML model requires
polynomial time with respect to the size of the vector and number of clusters. We show that this is a tractable problem by introducing a recursion formula for the efficient computation of normalizing constant from the NML model. The time complexity of the new formula is linear opposed to previous
polynomial time with respect to the size of the vector and number of clusters.
Read the full abstract ▾
Machine Learning (Statistics) · Cross-listed from cs.LG
Sharp Approximation Rates for Neural Networks with Affine Latent Parameterizations
Shijun Zhang
Many parameter-efficient methods generate the parameters of a large neural network from a low-dimensional latent representation. Given an architecture $\Phi$ with $P_\Phi$ parameter slots, we write $\boldsymbol{\theta}_f=\mathcal{G}(\boldsymbol{\xi}_f)$, where $\mathcal{G}\colon\mathbb{R}^M\to\mathbb{R}^{P_\Phi}$ is a parameter generator and $\boldsymbol{\xi}_f\in\mathbb{R}^M$ is a latent representation of the target function $f$. The architecture $\Phi$ and the generator $\mathcal{G}$ are shared across the entire target class, while each target $f$ is represented by its own latent vector $\boldsymbol{\xi}_f$, with $\Phi_{\mathcal{G}(\boldsymbol{\xi}_f)}$ approximating $f$. This framework encompasses hypernetworks, low-dimensional parameterizations, parameter-efficient adaptation, and model compression. Understanding the tradeoff between the latent dimension $M$ and the network budget $P$ is therefore fundamental to characterizing the expressive efficiency of these methods. We study this tradeoff for affine generators and fully connected ReLU architectures. More precisely, optimizing jointly over architectures $\Phi$ satisfying $P_\Phi\leq P$ and affine generators $\mathcal{G}:\mathbb{R}^M\to \mathbb{R}^{P_\Phi}$, we prove that the optimal worst-case uniform approximation error over the unit ball of $\alpha$-Hölder functions on $[0,1]^d$, where $0<\alpha\leq1$, has the sharp order $ \bigl(P\min\{M,P\}\bigr)^{-\alpha/d}. $ In particular, our result shows that even a fixed-dimensional latent space suffices to achieve vanishing approximation error as the network budget increases.
Read the full abstract ▾
Statistics Theory
Scale Analysis and Shape Selection for the Generalized Gaussian Mechanism under Approximate Differential Privacy
Xiang Zhang, Mohamedou Ould Haye and Yiqiang Q. Zhao
Differential
privacy provides a rigorous framework for protecting private information, typically achieved by adding random noise to query results. The generalized Gaussian family is a flexible class of additive noise distributions indexed by the shape parameter $p$ and includes the Laplace and Gaussian distributions as special cases $p=1$ and $p=2$, respectively. This paper studies the
privacy-feasible scale estimation and the shape parameter selection of the generalized Gaussian mechanism (GGM) under $(\varepsilon,\delta)$-differential
privacy. For a given sensitivity vector $\Delta$ and $p\in[1,\infty]$, let $b(p)$ denote the smallest value of the scale parameter for which the mechanism satisfies this
privacy requirement. In the one-dimensional case, $b(p)$ can be implicitly characterized by a system of equations. For vector-valued queries, we construct a computable upper approximation of $b(p)$ that preserves the
privacy guarantee. Shapes are compared under a scale-homogeneous utility criterion, with the $m$-th absolute moment as the main example. We develop an interval-wise shape search
algorithm with an approximation guarantee that can be made arbitrarily precise. We also establish the invariance of the optimal shape under rescaling of the sensitivity vector and characterize its limiting behaviour under high
privacy limits. Computational experiments show that optimizing shape parameters can improve utility by reducing the variance of each coordinate by 5% to 20% across a variety of cases, with some cases showing even greater reductions, while maintaining the same level of
privacy protection. Task-specific experiments further show that shape optimization can improve task-level utility, reduce attacker success, or achieve both.
Read the full abstract ▾
Machine Learning (Statistics)
Implementing neural network mixed-effects models in Template Model Builder (TMB)
Nan Zheng, Hoi Yiu Cheung, Vibhu Sharma et al. (+2 more)
Neural network mixed-effects models (NMMs) have gained traction by combining the strong representation and predictive power of artificial neural networks with the capacity of mixed-effects modeling to capture complex correlation structures. However, existing estimation approaches rely heavily on manual derivations of objective functions and gradients, which inherently forces simplifying approximations and severely constrains the complexity and accuracy of NMMs. In this work, we introduce a general framework for implementing NMMs using Template Model Builder (TMB). By leveraging automatic differentiation and Laplace approximation, TMB requires users to specify only the negative joint log-likelihood and any regularization terms. The framework automatically integrates out random effects and evaluates the marginal objective function alongside its exact gradients, eliminating the need for manual derivations or ad hoc approximations. We demonstrate the efficiency, flexibility, and statistical performance of TMB-based NMMs across two numerical examples, including an application to monotonic NMMs. Reproducible code is provided to facilitate broader adoption.
Read the full abstract ▾
All authors Nan Zheng, Hoi Yiu Cheung, Vibhu Sharma, James T. Thorson, Noel G. Cadigan
Machine Learning (Statistics) · Cross-listed from cond-mat.stat-mech
Overcoming critical slowing down in frustrated spin systems by learned multiscale sampling
Gabriele Bandini, Giulio Biroli, Patrick Charbonneau et al. (+1 more)
Cluster
algorithms, such as the Swendsen–Wang and Wolff methods, are among the most successful MCMC methods for mitigating critical slowing down in statistical systems. These constructive cluster
algorithms, however, fail in the presence of even extremely weak frustration. Here, we sidestep this fundamental limitation by learning rather than constructing the relevant clusters. Specifically, we use the wavelet conditional renormalization group (WCRG) sampling method to learn the probability distribution of collective fluctuations of a frustrated two-dimensional soft-
spin model. Configurations are then generated recursively from coarse to fine scales by sampling conditional wavelet distributions. The WCRG method reproduces the main statistical properties of the system across different phases, including the local-field distribution and the structure factor. At an Ising-like critical point, the conditional dynamics remains decorrelated within $\mathcal{O}(1)$ sweeps at each scale, yielding an overall sampling complexity of $\mathcal{O}(\log_2 L)$, thus making WCRG much more efficient than standard local MCMC methods. These results show that learned multiscale sampling can overcome critical slowing down in frustrated systems for which conventional cluster
algorithms fail. By assessing the sampling accuracy of different observables, we also clarify the main tradeoff of the WCRG method: the accuracy of the fast sampling scheme depends on the expressiveness of the energy-based model used to estimate the wavelet conditional distributions.
Read the full abstract ▾
All authors Gabriele Bandini, Giulio Biroli, Patrick Charbonneau, Andrea Gambassi